RNA–Protein interactions for RNA: ENST00000635120.1

CSMD1-218, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CSMD1, Length 11,737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-218ENST00000635120 ITGA3P26006 1051 aa9.23□□□□□ -0.93
CSMD1-218ENST00000635120 HIPK1Q86Z02 1210 aa9.23□□□□□ -0.93
CSMD1-218ENST00000635120 SPATA20Q8TB22 786 aa9.23□□□□□ -0.93
CSMD1-218ENST00000635120 STARD8Q92502 1023 aa9.23□□□□□ -0.93
CSMD1-218ENST00000635120 HACD1B0YJ81 288 aa9.23□□□□□ -0.93
CSMD1-218ENST00000635120 FSBPO95073 299 aa9.23□□□□□ -0.93
CSMD1-218ENST00000635120 LSM3P62310 102 aaKnown RBP9.23□□□□□ -0.93
CSMD1-218ENST00000635120 ACSM2AQ08AH3 577 aa9.23□□□□□ -0.93
CSMD1-218ENST00000635120 TOMM20Q15388 145 aa9.23□□□□□ -0.93
CSMD1-218ENST00000635120 ACSM2BQ68CK6 577 aa9.23□□□□□ -0.93
CSMD1-218ENST00000635120 NET1Q7Z628 596 aaPredicted RBP9.23□□□□□ -0.93
CSMD1-218ENST00000635120 CAMK1DQ8IU85 385 aa9.23□□□□□ -0.93
CSMD1-218ENST00000635120 TRAPPC5Q8IUR0 188 aa9.23□□□□□ -0.93
CSMD1-218ENST00000635120 SYT12Q8IV01 421 aa9.23□□□□□ -0.93
CSMD1-218ENST00000635120 COMMD9Q9P000 198 aa9.23□□□□□ -0.93
CSMD1-218ENST00000635120 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.22□□□□□ -0.93
CSMD1-218ENST00000635120 YBX3P16989 372 aaKnown RBP eCLIP9.22□□□□□ -0.934e-6■□□□□ 11.2
CSMD1-218ENST00000635120 ATRXP46100 2492 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 PIK3CGP48736 1102 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 POLD2P49005 469 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 BIKQ13323 160 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 GRIK4Q16099 956 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 RBM43Q6ZSC3 357 aaKnown RBP9.22□□□□□ -0.93
CSMD1-218ENST00000635120 EIF3MQ7L2H7 374 aaKnown RBP9.22□□□□□ -0.93
CSMD1-218ENST00000635120 PIGUQ9H490 435 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 TSPAN9O75954 239 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 SASH3O75995 380 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 CYP1A1P04798 512 aaPredicted RBP9.22□□□□□ -0.93
CSMD1-218ENST00000635120 PRG2P13727 222 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 SKP1P63208 163 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 DEFB128Q7Z7B8 93 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 AHCYL2Q96HN2 611 aaKnown RBP9.22□□□□□ -0.93
CSMD1-218ENST00000635120 FDXACB1Q9BRP7 624 aaPredicted RBP9.22□□□□□ -0.93
CSMD1-218ENST00000635120 TIMM13Q9Y5L4 95 aaPredicted RBP9.22□□□□□ -0.93
CSMD1-218ENST00000635120 MIPP30301 263 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 CD86P42081 329 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 IL2P60568 153 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 TSC22D1Q15714 1073 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 MZT2AQ6P582 158 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 ATG14Q6ZNE5 492 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 IFNLR1Q8IU57 520 aaPredicted RBP9.22□□□□□ -0.93
CSMD1-218ENST00000635120 FNIP1Q8TF40 1166 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 ZNF606Q8WXB4 792 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 RRN3Q9NYV6 651 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 SNCAIPQ9Y6H5 919 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 IGSF6O95976 241 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 S100A9P06702 114 aaKnown RBP9.22□□□□□ -0.93
CSMD1-218ENST00000635120 EPORP19235 508 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 BACE1P56817 501 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 CDC42P60953 191 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 FAM20CQ8IXL6 584 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 COL26A1Q96A83 441 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 CD163L1Q9NR16 1453 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 ABRAXAS1Q6UWZ7 409 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 PLEKHH3Q7Z736 793 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 GDF3Q9NR23 364 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 NCOA3Q9Y6Q9 1424 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 FAM25EA8MYX2 175 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 CSF1RP07333 972 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 PSMD4P55036 377 aaKnown RBP9.22□□□□□ -0.93
CSMD1-218ENST00000635120 FNDC3BQ53EP0 1204 aaKnown RBP9.22□□□□□ -0.93
CSMD1-218ENST00000635120 CYP2W1Q8TAV3 490 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 SLC4A5Q9BY07 1137 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 IL22Q9GZX6 179 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 IKZF3Q9UKT9 509 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 OGDHLQ9ULD0 1010 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 DCDC2CA8MYV0 355 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 RBAK-RBAKDNI3L0D1 243 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 FFAR3O14843 346 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 CHADO15335 359 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 GPR42O15529 346 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 RGS20O76081 388 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 SPIDRQ14159 915 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 VPS72Q15906 364 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 TMEM63BQ5T3F8 832 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 DET1Q7L5Y6 550 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 OFCC1Q8IZS5 231 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 CHID1Q9BWS9 393 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 KLQ9UEF7 1012 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 TMEM150BA6NC51 233 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 OR6A2O95222 327 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 COPZ1P61923 177 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 PDK3Q15120 406 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 SLC45A4Q5BKX6 768 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 MYLPFQ96A32 169 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 PDCD10Q9BUL8 212 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 ASTN2O75129 1339 aaPredicted RBP9.22□□□□□ -0.93
CSMD1-218ENST00000635120 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.22□□□□□ -0.93
CSMD1-218ENST00000635120 FARP2O94887 1054 aaPredicted RBP9.22□□□□□ -0.93
CSMD1-218ENST00000635120 CYP2A6P11509 494 aaPredicted RBP9.22□□□□□ -0.93
CSMD1-218ENST00000635120 RPS12P25398 132 aaKnown RBP9.22□□□□□ -0.93
CSMD1-218ENST00000635120 KCNJ2P63252 427 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 LIN54Q6MZP7 749 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 C16orf46Q6P387 395 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 KATNAL2Q8IYT4 538 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 ANKRD13AQ8IZ07 590 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 GSTK1Q9Y2Q3 226 aa9.22□□□□□ -0.93
CSMD1-218ENST00000635120 RRP1BQ14684 758 aaKnown RBP9.21□□□□□ -0.93
CSMD1-218ENST00000635120 CYP2A13Q16696 494 aa9.21□□□□□ -0.93
CSMD1-218ENST00000635120 FAM171A1Q5VUB5 890 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms