RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 PTCH2Q9Y6C5 1203 aa12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 OR56A5P0C7T3 313 aa12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 HOXB8P17481 243 aaPredicted RBP12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 TSPAN8P19075 237 aa12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 TFEBP19484 476 aa12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 CCT8P50990 548 aa12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 ALDH6A1Q02252 535 aaKnown RBP12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 LCLAT1Q6UWP7 414 aa12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 DENND1CQ8IV53 801 aa12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 RASGEF1CQ8N431 466 aa12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 NDRG1Q92597 394 aaKnown RBP12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 SERAC1Q96JX3 654 aa12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 SLC25A23Q9BV35 468 aa12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 ACE2Q9BYF1 805 aaPredicted RBP12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 MAN1C1Q9NR34 630 aa12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 ATXN10Q9UBB4 475 aa12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 DPP7Q9UHL4 492 aa12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 USP2O75604 605 aaPredicted RBP12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 ZMPSTE24O75844 475 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 LTA4HP09960 611 aaKnown RBP12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 RAD23AP54725 363 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 PPM1LQ5SGD2 360 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 RD3Q7Z3Z2 195 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 GPR141Q7Z602 305 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 KCTD4Q8WVF5 259 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 DPF3Q92784 378 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 PANX3Q96QZ0 392 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 COQ7Q99807 217 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 TMEM79Q9BSE2 394 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 ROGDIQ9GZN7 287 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 ST6GALNAC4Q9H4F1 302 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 LRRC4CQ9HCJ2 640 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 XPNPEP1Q9NQW7 623 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 ARL15Q9NXU5 204 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 TRPC4Q9UBN4 977 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 FBXO5Q9UKT4 447 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 BTBD19C9JJ37 291 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 NFAT5O94916 1531 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 SERPINA4P29622 427 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 SLC25A3Q00325 362 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 GBE1Q04446 702 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 MSLNQ13421 630 aaPredicted RBP12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 IL27RAQ6UWB1 636 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 TRABD2AQ86V40 505 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 SPATA6LQ8N4H0 392 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 PYDC1Q8WXC3 89 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 MARK4Q96L34 752 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 ZNF541Q9H0D2 1346 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 ASB8Q9H765 288 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 DNMT3LQ9UJW3 386 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 GIT1Q9Y2X7 761 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 CCDC154A6NI56 674 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 LSM1O15116 133 aaKnown RBP12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 TREHO43280 583 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 TLR5O60602 858 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 CILPO75339 1184 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 RASSF9O75901 435 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 DRD4P21917 467 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 ABL2P42684 1182 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 MRPS22P82650 360 aaKnown RBP12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 MRPS15P82914 257 aaKnown RBP12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 ACOX1Q15067 660 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 PLCL1Q15111 1095 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 TSHZ1Q6ZSZ6 1077 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 YTHDF3Q7Z739 585 aaKnown RBP12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 CMC1Q7Z7K0 106 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 PTGR2Q8N8N7 351 aaPredicted RBP12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 STAG3L4Q8TBR4 150 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 SPPL2AQ8TCT8 520 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 STK32AQ8WU08 396 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 RNF145Q96MT1 663 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 TRAPPC9Q96Q05 1148 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 MLPHQ9BV36 600 aaPredicted RBP12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 OPTCQ9UBM4 332 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 ATP6V1G1O75348 118 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 UNC5CO95185 931 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 AMHP03971 560 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 ADRA1BP35368 520 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 ARL2P36404 184 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 CRY1Q16526 586 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 PTPRNQ16849 979 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 OR6Y1Q8NGX8 325 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 GDPD5Q8WTR4 605 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 BTN2A2Q8WVV5 523 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 VPS33AQ96AX1 596 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 PPP1R14BQ96C90 147 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 MECRQ9BV79 373 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 BPIFA1Q9NP55 256 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 SYBUQ9NX95 663 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 CARD8Q9Y2G2 431 aa12.66□□□□□ -0.38
TNFAIP3-206ENST00000612899 UBR1Q8IWV7 1749 aa12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 PSMD12O00232 456 aaPredicted RBP12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 TSPAN9O75954 239 aa12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 KRT8P05787 483 aa12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 GSTM1P09488 218 aa12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 TYMPP19971 482 aa12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 KCNJ2P63252 427 aa12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 ELF3P78545 371 aaPredicted RBP12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 FAM110CQ1W6H9 321 aa12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 SLC25A52Q3SY17 297 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms