RNA–Protein interactions for RNA: ENST00000604024.5

CEP290-208, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-208ENST00000604024 BNC1Q01954 994 aa1.41□□□□□ -2.18
CEP290-208ENST00000604024 CCNYL2Q5T2Q4 361 aa1.41□□□□□ -2.18
CEP290-208ENST00000604024 TMEM200AQ86VY9 491 aa1.41□□□□□ -2.18
CEP290-208ENST00000604024 USP13Q92995 863 aaPredicted RBP1.41□□□□□ -2.18
CEP290-208ENST00000604024 OR1F2PQ96R84 312 aa1.41□□□□□ -2.18
CEP290-208ENST00000604024 TP63Q9H3D4 680 aaPredicted RBP1.41□□□□□ -2.18
CEP290-208ENST00000604024 HIPK3Q9H422 1215 aa1.41□□□□□ -2.18
CEP290-208ENST00000604024 FKRPQ9H9S5 495 aa1.41□□□□□ -2.18
CEP290-208ENST00000604024 MTPAPQ9NVV4 582 aaKnown RBP eCLIP1.41□□□□□ -2.18
CEP290-208ENST00000604024 COPG1Q9Y678 874 aaKnown RBP1.41□□□□□ -2.18
CEP290-208ENST00000604024 A0A096LPK6 155 aa1.4□□□□□ -2.18
CEP290-208ENST00000604024 RHPN2P1A8MT19 583 aa1.4□□□□□ -2.18
CEP290-208ENST00000604024 TPP1O14773 563 aa1.4□□□□□ -2.18
CEP290-208ENST00000604024 HNRNPRO43390 633 aaKnown RBP1.4□□□□□ -2.18
CEP290-208ENST00000604024 ITM2AO43736 263 aa1.4□□□□□ -2.18
CEP290-208ENST00000604024 PMS2P2O95744 297 aa1.4□□□□□ -2.18
CEP290-208ENST00000604024 PAX1P15863 534 aa1.4□□□□□ -2.18
CEP290-208ENST00000604024 CASP5P51878 434 aa1.4□□□□□ -2.18
CEP290-208ENST00000604024 RAD23BP54727 409 aa1.4□□□□□ -2.18
CEP290-208ENST00000604024 ANAPC15P60006 121 aa1.4□□□□□ -2.18
CEP290-208ENST00000604024 HNF4GQ14541 408 aa1.4□□□□□ -2.18
CEP290-208ENST00000604024 NFE2Q16621 373 aaPredicted RBP1.4□□□□□ -2.18
CEP290-208ENST00000604024 ZNF569Q5MCW4 686 aa1.4□□□□□ -2.18
CEP290-208ENST00000604024 FAM171A1Q5VUB5 890 aa1.4□□□□□ -2.18
CEP290-208ENST00000604024 FAM69BQ5VUD6 431 aa1.4□□□□□ -2.18
CEP290-208ENST00000604024 RAP1GAP2Q684P5 730 aa1.4□□□□□ -2.18
CEP290-208ENST00000604024 C19orf48Q6RUI8 117 aa1.4□□□□□ -2.18
CEP290-208ENST00000604024 NFE4Q86UQ8 179 aa1.4□□□□□ -2.18
CEP290-208ENST00000604024 CNBD1Q8NA66 436 aa1.4□□□□□ -2.18
CEP290-208ENST00000604024 CEP76Q8TAP6 659 aa1.4□□□□□ -2.18
CEP290-208ENST00000604024 FAR1Q8WVX9 515 aa1.4□□□□□ -2.18
CEP290-208ENST00000604024 TMEM18Q96B42 140 aa1.4□□□□□ -2.18
CEP290-208ENST00000604024 EID2BQ96D98 161 aa1.4□□□□□ -2.18
CEP290-208ENST00000604024 LGALS12Q96DT0 336 aa1.4□□□□□ -2.18
CEP290-208ENST00000604024 APOLD1Q96LR9 279 aa1.4□□□□□ -2.18
CEP290-208ENST00000604024 MSTO1Q9BUK6 570 aa1.4□□□□□ -2.18
CEP290-208ENST00000604024 ZNF304Q9HCX3 659 aa1.4□□□□□ -2.18
CEP290-208ENST00000604024 SLC12A4Q9UP95 1085 aa1.4□□□□□ -2.18
CEP290-208ENST00000604024 CLDN16Q9Y5I7 305 aa1.4□□□□□ -2.18
CEP290-208ENST00000604024 CGNL1Q0VF96 1302 aa1.4□□□□□ -2.19
CEP290-208ENST00000604024 IGKV3D-15A0A087WSY6 115 aa1.4□□□□□ -2.19
CEP290-208ENST00000604024 TBC1D3DA0A087WVF3 549 aa1.4□□□□□ -2.19
CEP290-208ENST00000604024 TBC1D3IA0A087WXS9 549 aa1.4□□□□□ -2.19
CEP290-208ENST00000604024 TBC1D3EA0A087X179 549 aa1.4□□□□□ -2.19
CEP290-208ENST00000604024 TBC1D3KA0A087X1G2 549 aa1.4□□□□□ -2.19
CEP290-208ENST00000604024 DYTNA2CJ06 578 aa1.4□□□□□ -2.19
CEP290-208ENST00000604024 TBC1D3BA6NDS4 549 aa1.4□□□□□ -2.19
CEP290-208ENST00000604024 TBC1D3FA6NER0 549 aaPredicted RBP1.4□□□□□ -2.19
CEP290-208ENST00000604024 TBC1D3LB9A6J9 549 aa1.4□□□□□ -2.19
CEP290-208ENST00000604024 CLGNO14967 610 aa1.4□□□□□ -2.19
CEP290-208ENST00000604024 TFRCP02786 760 aaKnown RBP1.4□□□□□ -2.19
CEP290-208ENST00000604024 TBC1D3HP0C7X1 549 aa1.4□□□□□ -2.19
CEP290-208ENST00000604024 CFC1BP0CG36 223 aa1.4□□□□□ -2.19
CEP290-208ENST00000604024 CFC1P0CG37 223 aa1.4□□□□□ -2.19
CEP290-208ENST00000604024 PPP3CCP48454 512 aa1.4□□□□□ -2.19
CEP290-208ENST00000604024 MXI1P50539 228 aa1.4□□□□□ -2.19
CEP290-208ENST00000604024 CHAF1AQ13111 956 aaPredicted RBP1.4□□□□□ -2.19
CEP290-208ENST00000604024 PPP6R3Q5H9R7 873 aaPredicted RBP1.4□□□□□ -2.19
CEP290-208ENST00000604024 TBC1D3GQ6DHY5 549 aa1.4□□□□□ -2.19
CEP290-208ENST00000604024 TBC1D3CQ6IPX1 549 aa1.4□□□□□ -2.19
CEP290-208ENST00000604024 MARK2Q7KZI7 788 aaKnown RBP1.4□□□□□ -2.19
CEP290-208ENST00000604024 TBC1D3Q8IZP1 549 aaPredicted RBP1.4□□□□□ -2.19
CEP290-208ENST00000604024 OGFRQ9NZT2 677 aa1.4□□□□□ -2.19
CEP290-208ENST00000604024 LRFN1Q9P244 771 aa1.4□□□□□ -2.19
CEP290-208ENST00000604024 SPATA31D1Q6ZQQ2 1576 aa1.4□□□□□ -2.19
CEP290-208ENST00000604024 ATXN2Q99700 1313 aaKnown RBP1.4□□□□□ -2.19
CEP290-208ENST00000604024 IGKV3D-20A0A0C4DH25 116 aa1.39□□□□□ -2.19
CEP290-208ENST00000604024 F8W8V4 182 aa1.39□□□□□ -2.19
CEP290-208ENST00000604024 TAF5LO75529 589 aa1.39□□□□□ -2.19
CEP290-208ENST00000604024 CRYAAP02489 173 aa1.39□□□□□ -2.19
CEP290-208ENST00000604024 ZNF883P0CG24 379 aa1.39□□□□□ -2.19
CEP290-208ENST00000604024 LIFRP42702 1097 aa1.39□□□□□ -2.19
CEP290-208ENST00000604024 LUMP51884 338 aaPredicted RBP1.39□□□□□ -2.19
CEP290-208ENST00000604024 PITX1P78337 314 aaPredicted RBP1.39□□□□□ -2.19
CEP290-208ENST00000604024 GRIK2Q13002 908 aa1.39□□□□□ -2.19
CEP290-208ENST00000604024 HLTFQ14527 1009 aaKnown RBP eCLIP1.39□□□□□ -2.19
CEP290-208ENST00000604024 KRTAP21-3Q3LHN1 58 aa1.39□□□□□ -2.19
CEP290-208ENST00000604024 MAPK1IP1LQ8NDC0 245 aa1.39□□□□□ -2.19
CEP290-208ENST00000604024 FBRSL1Q9HCM7 1045 aaKnown RBP1.39□□□□□ -2.19
CEP290-208ENST00000604024 Q9N2J8 555 aa1.39□□□□□ -2.19
CEP290-208ENST00000604024 SLCO3A1Q9UIG8 710 aa1.39□□□□□ -2.19
CEP290-208ENST00000604024 PAM16Q9Y3D7 125 aa1.39□□□□□ -2.19
CEP290-208ENST00000604024 SNX13Q9Y5W8 968 aa1.39□□□□□ -2.19
CEP290-208ENST00000604024 RNF215Q9Y6U7 377 aa1.39□□□□□ -2.19
CEP290-208ENST00000604024 FRMPD2Q68DX3 1309 aaPredicted RBP1.39□□□□□ -2.19
CEP290-208ENST00000604024 ZNF500O60304 480 aaPredicted RBP1.39□□□□□ -2.19
CEP290-208ENST00000604024 CCNT1O60563 726 aaKnown RBP1.39□□□□□ -2.19
CEP290-208ENST00000604024 PECAM1P16284 738 aaPredicted RBP1.39□□□□□ -2.19
CEP290-208ENST00000604024 CENPAP49450 140 aa1.39□□□□□ -2.19
CEP290-208ENST00000604024 ATP12AP54707 1039 aa1.39□□□□□ -2.19
CEP290-208ENST00000604024 IGBP1P78318 339 aa1.39□□□□□ -2.19
CEP290-208ENST00000604024 GRSF1Q12849 480 aaKnown RBP eCLIP1.39□□□□□ -2.19
CEP290-208ENST00000604024 P3H1Q32P28 736 aa1.39□□□□□ -2.19
CEP290-208ENST00000604024 XKR9Q5GH70 373 aa1.39□□□□□ -2.19
CEP290-208ENST00000604024 METTL7BQ6UX53 244 aa1.39□□□□□ -2.19
CEP290-208ENST00000604024 TMEM217Q8N7C4 229 aa1.39□□□□□ -2.19
CEP290-208ENST00000604024 CADM4Q8NFZ8 388 aa1.39□□□□□ -2.19
CEP290-208ENST00000604024 ANKRD9Q96BM1 317 aaPredicted RBP1.39□□□□□ -2.19
CEP290-208ENST00000604024 SCRN2Q96FV2 425 aa1.39□□□□□ -2.19
CEP290-208ENST00000604024 ZNF419Q96HQ0 510 aaPredicted RBP1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms