RNA–Protein interactions for RNA: ENST00000520880.1

CTHRC1-204, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 4 BASIC

Gene CTHRC1, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-204ENST00000520880 PLEKHB1Q9UF11 243 aaPredicted RBP4.58□□□□□ -1.68
CTHRC1-204ENST00000520880 FZD10Q9ULW2 581 aa4.58□□□□□ -1.68
CTHRC1-204ENST00000520880 MAGED2Q9UNF1 606 aaPredicted RBP4.58□□□□□ -1.68
CTHRC1-204ENST00000520880 DTX4Q9Y2E6 619 aa4.58□□□□□ -1.68
CTHRC1-204ENST00000520880 PCDHGB2Q9Y5G2 931 aa4.58□□□□□ -1.68
CTHRC1-204ENST00000520880 COPG1Q9Y678 874 aaKnown RBP4.58□□□□□ -1.68
CTHRC1-204ENST00000520880 EIF3AQ14152 1382 aaKnown RBP4.57□□□□□ -1.68
CTHRC1-204ENST00000520880 TBC1D3DA0A087WVF3 549 aa4.57□□□□□ -1.68
CTHRC1-204ENST00000520880 TBC1D3IA0A087WXS9 549 aa4.57□□□□□ -1.68
CTHRC1-204ENST00000520880 TBC1D3EA0A087X179 549 aa4.57□□□□□ -1.68
CTHRC1-204ENST00000520880 TBC1D3KA0A087X1G2 549 aa4.57□□□□□ -1.68
CTHRC1-204ENST00000520880 TBC1D3BA6NDS4 549 aa4.57□□□□□ -1.68
CTHRC1-204ENST00000520880 TBC1D3FA6NER0 549 aaPredicted RBP4.57□□□□□ -1.68
CTHRC1-204ENST00000520880 TBC1D3LB9A6J9 549 aa4.57□□□□□ -1.68
CTHRC1-204ENST00000520880 PLA2G6O60733 806 aa4.57□□□□□ -1.68
CTHRC1-204ENST00000520880 TBC1D3HP0C7X1 549 aa4.57□□□□□ -1.68
CTHRC1-204ENST00000520880 CHRNB2P17787 502 aa4.57□□□□□ -1.68
CTHRC1-204ENST00000520880 AKT1P31749 480 aa4.57□□□□□ -1.68
CTHRC1-204ENST00000520880 PMS2P54278 862 aa4.57□□□□□ -1.68
CTHRC1-204ENST00000520880 RBM6P78332 1123 aaKnown RBP4.57□□□□□ -1.68
CTHRC1-204ENST00000520880 RHAGQ02094 409 aa4.57□□□□□ -1.68
CTHRC1-204ENST00000520880 DUSP6Q16828 381 aa4.57□□□□□ -1.68
CTHRC1-204ENST00000520880 C9orf50Q5SZB4 431 aa4.57□□□□□ -1.68
CTHRC1-204ENST00000520880 OTUD1Q5VV17 481 aaPredicted RBP4.57□□□□□ -1.68
CTHRC1-204ENST00000520880 TBC1D3GQ6DHY5 549 aa4.57□□□□□ -1.68
CTHRC1-204ENST00000520880 TBC1D3CQ6IPX1 549 aa4.57□□□□□ -1.68
CTHRC1-204ENST00000520880 PRSS57Q6UWY2 283 aa4.57□□□□□ -1.68
CTHRC1-204ENST00000520880 Q6ZSV7 163 aa4.57□□□□□ -1.68
CTHRC1-204ENST00000520880 KLBQ86Z14 1044 aa4.57□□□□□ -1.68
CTHRC1-204ENST00000520880 CCAR1Q8IX12 1150 aaKnown RBP4.57□□□□□ -1.68
CTHRC1-204ENST00000520880 TBC1D3Q8IZP1 549 aaPredicted RBP4.57□□□□□ -1.68
CTHRC1-204ENST00000520880 TMEM217Q8N7C4 229 aa4.57□□□□□ -1.68
CTHRC1-204ENST00000520880 ZBTB8BQ8NAP8 495 aaPredicted RBP4.57□□□□□ -1.68
CTHRC1-204ENST00000520880 CMASQ8NFW8 434 aaPredicted RBP4.57□□□□□ -1.68
CTHRC1-204ENST00000520880 SORBS1Q9BX66 1292 aaKnown RBP4.57□□□□□ -1.68
CTHRC1-204ENST00000520880 STK33Q9BYT3 514 aa4.57□□□□□ -1.68
CTHRC1-204ENST00000520880 B3GNT4Q9C0J1 378 aa4.57□□□□□ -1.68
CTHRC1-204ENST00000520880 CERS4Q9HA82 394 aa4.57□□□□□ -1.68
CTHRC1-204ENST00000520880 PLSCR4Q9NRQ2 329 aa4.57□□□□□ -1.68
CTHRC1-204ENST00000520880 SLC39A10Q9ULF5 831 aa4.57□□□□□ -1.68
CTHRC1-204ENST00000520880 SCN5AQ14524 2016 aa4.56□□□□□ -1.68
CTHRC1-204ENST00000520880 ZFYVE9O95405 1425 aa4.56□□□□□ -1.68
CTHRC1-204ENST00000520880 KTN1Q86UP2 1357 aaKnown RBP4.56□□□□□ -1.68
CTHRC1-204ENST00000520880 PARD3Q8TEW0 1356 aa4.56□□□□□ -1.68
CTHRC1-204ENST00000520880 RPGRIP1LQ68CZ1 1315 aa4.56□□□□□ -1.68
CTHRC1-204ENST00000520880 UBR1Q8IWV7 1749 aa4.56□□□□□ -1.68
CTHRC1-204ENST00000520880 A0A087WYN8 130 aa4.56□□□□□ -1.68
CTHRC1-204ENST00000520880 STAT1P42224 750 aa4.56□□□□□ -1.68
CTHRC1-204ENST00000520880 ZP1P60852 638 aa4.56□□□□□ -1.68
CTHRC1-204ENST00000520880 TMF1P82094 1093 aa4.56□□□□□ -1.68
CTHRC1-204ENST00000520880 RNASELQ05823 741 aaKnown RBP4.56□□□□□ -1.68
CTHRC1-204ENST00000520880 IZUMO4Q1ZYL8 232 aa4.56□□□□□ -1.68
CTHRC1-204ENST00000520880 DNTTIP2Q5QJE6 756 aaKnown RBP4.56□□□□□ -1.68
CTHRC1-204ENST00000520880 AAGABQ6PD74 315 aa4.56□□□□□ -1.68
CTHRC1-204ENST00000520880 FAM110DQ8TAY7 271 aaPredicted RBP4.56□□□□□ -1.68
CTHRC1-204ENST00000520880 WFIKKN2Q8TEU8 576 aa4.56□□□□□ -1.68
CTHRC1-204ENST00000520880 PARD3BQ8TEW8 1205 aa4.56□□□□□ -1.68
CTHRC1-204ENST00000520880 KIAA1191Q96A73 305 aa4.56□□□□□ -1.68
CTHRC1-204ENST00000520880 CATSPERBQ9H7T0 1116 aa4.56□□□□□ -1.68
CTHRC1-204ENST00000520880 NFU1Q9UMS0 254 aa4.56□□□□□ -1.68
CTHRC1-204ENST00000520880 PCDHGB1Q9Y5G3 927 aa4.56□□□□□ -1.68
CTHRC1-204ENST00000520880 USP32Q8NFA0 1604 aa4.56□□□□□ -1.68
CTHRC1-204ENST00000520880 NRXN3Q9Y4C0 1643 aa4.56□□□□□ -1.68
CTHRC1-204ENST00000520880 KNDC1Q76NI1 1749 aa4.55□□□□□ -1.68
CTHRC1-204ENST00000520880 C3P01024 1663 aa4.55□□□□□ -1.68
CTHRC1-204ENST00000520880 ALKQ9UM73 1620 aa4.55□□□□□ -1.68
CTHRC1-204ENST00000520880 SLC38A8A6NNN8 435 aa4.55□□□□□ -1.68
CTHRC1-204ENST00000520880 DNPH1O43598 174 aa4.55□□□□□ -1.68
CTHRC1-204ENST00000520880 PPP1R3DO95685 299 aa4.55□□□□□ -1.68
CTHRC1-204ENST00000520880 PKMP14618 531 aaKnown RBP4.55□□□□□ -1.68
CTHRC1-204ENST00000520880 KLRC2P26717 231 aa4.55□□□□□ -1.68
CTHRC1-204ENST00000520880 COMPP49747 757 aaPredicted RBP4.55□□□□□ -1.68
CTHRC1-204ENST00000520880 ART1P52961 327 aa4.55□□□□□ -1.68
CTHRC1-204ENST00000520880 SF3A3Q12874 501 aaKnown RBP eCLIP4.55□□□□□ -1.68
CTHRC1-204ENST00000520880 SLC30A9Q6PML9 568 aa4.55□□□□□ -1.68
CTHRC1-204ENST00000520880 CAMK1DQ8IU85 385 aa4.55□□□□□ -1.68
CTHRC1-204ENST00000520880 NRSN1Q8IZ57 195 aa4.55□□□□□ -1.68
CTHRC1-204ENST00000520880 LRRC57Q8N9N7 239 aa4.55□□□□□ -1.68
CTHRC1-204ENST00000520880 APOLD1Q96LR9 279 aa4.55□□□□□ -1.68
CTHRC1-204ENST00000520880 PRPF18Q99633 342 aaKnown RBP4.55□□□□□ -1.68
CTHRC1-204ENST00000520880 TMEM120AQ9BXJ8 343 aa4.55□□□□□ -1.68
CTHRC1-204ENST00000520880 CDT1Q9H211 546 aa4.55□□□□□ -1.68
CTHRC1-204ENST00000520880 METTL14Q9HCE5 456 aaKnown RBP4.55□□□□□ -1.68
CTHRC1-204ENST00000520880 ARL15Q9NXU5 204 aa4.55□□□□□ -1.68
CTHRC1-204ENST00000520880 PKP3Q9Y446 797 aa4.55□□□□□ -1.68
CTHRC1-204ENST00000520880 SLC4A4Q9Y6R1 1079 aa4.55□□□□□ -1.68
CTHRC1-204ENST00000520880 TULP4Q9NRJ4 1543 aa4.55□□□□□ -1.68
CTHRC1-204ENST00000520880 ANKRD26Q9UPS8 1709 aa4.55□□□□□ -1.68
CTHRC1-204ENST00000520880 BRD4O60885 1362 aaPredicted RBP4.54□□□□□ -1.68
CTHRC1-204ENST00000520880 LRPPRCP42704 1394 aaKnown RBP4.54□□□□□ -1.68
CTHRC1-204ENST00000520880 TCRBV7S3A2A0A539 114 aa4.54□□□□□ -1.68
CTHRC1-204ENST00000520880 PARNO95453 639 aaKnown RBP4.54□□□□□ -1.68
CTHRC1-204ENST00000520880 GLUD1P00367 558 aa4.54□□□□□ -1.68
CTHRC1-204ENST00000520880 IGKV3-20P01619 116 aa4.54□□□□□ -1.68
CTHRC1-204ENST00000520880 GLUD2P49448 558 aa4.54□□□□□ -1.68
CTHRC1-204ENST00000520880 TMPRSS3P57727 454 aa4.54□□□□□ -1.68
CTHRC1-204ENST00000520880 IDI1Q13907 227 aa4.54□□□□□ -1.68
CTHRC1-204ENST00000520880 KRTAP27-1Q3LI81 207 aa4.54□□□□□ -1.68
CTHRC1-204ENST00000520880 ZNF569Q5MCW4 686 aa4.54□□□□□ -1.68
CTHRC1-204ENST00000520880 TMEM71Q6P5X7 295 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms