RNA–Protein interactions for RNA: ENST00000466861.1

SUMO3-205, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2

Gene SUMO3, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-205ENST00000466861 ZNF354CQ86Y25 554 aa23.75■■□□□ 1.39
SUMO3-205ENST00000466861 CPNE8Q86YQ8 564 aa23.75■■□□□ 1.39
SUMO3-205ENST00000466861 MMAAQ8IVH4 418 aaKnown RBP23.75■■□□□ 1.39
SUMO3-205ENST00000466861 TMIEQ8NEW7 156 aa23.75■■□□□ 1.39
SUMO3-205ENST00000466861 CADM4Q8NFZ8 388 aa23.75■■□□□ 1.39
SUMO3-205ENST00000466861 TPCN2Q8NHX9 752 aa23.75■■□□□ 1.39
SUMO3-205ENST00000466861 FOXJ1Q92949 421 aa23.75■■□□□ 1.39
SUMO3-205ENST00000466861 ERLEC1Q96DZ1 483 aa23.75■■□□□ 1.39
SUMO3-205ENST00000466861 LRIG1Q96JA1 1093 aa23.75■■□□□ 1.39
SUMO3-205ENST00000466861 PDFQ9HBH1 243 aa23.75■■□□□ 1.39
SUMO3-205ENST00000466861 NCDNQ9UBB6 729 aa23.75■■□□□ 1.39
SUMO3-205ENST00000466861 INVSQ9Y283 1065 aa23.75■■□□□ 1.39
SUMO3-205ENST00000466861 EP300Q09472 2414 aaPredicted RBP23.74■■□□□ 1.39
SUMO3-205ENST00000466861 ZFHX2Q9C0A1 2572 aaPredicted RBP23.74■■□□□ 1.39
SUMO3-205ENST00000466861 RCCD1A6NED2 376 aa23.74■■□□□ 1.39
SUMO3-205ENST00000466861 SPOPO43791 374 aa23.74■■□□□ 1.39
SUMO3-205ENST00000466861 NRDCO43847 1150 aa23.74■■□□□ 1.39
SUMO3-205ENST00000466861 NDUFS2O75306 463 aa23.74■■□□□ 1.39
SUMO3-205ENST00000466861 ZNF821O75541 412 aaPredicted RBP23.74■■□□□ 1.39
SUMO3-205ENST00000466861 GSRP00390 522 aa23.74■■□□□ 1.39
SUMO3-205ENST00000466861 KDELR1P24390 212 aa23.74■■□□□ 1.39
SUMO3-205ENST00000466861 PAPOLAP51003 745 aaKnown RBP23.74■■□□□ 1.39
SUMO3-205ENST00000466861 IL10RBQ08334 325 aa23.74■■□□□ 1.39
SUMO3-205ENST00000466861 CCDC15Q0P6D6 951 aa23.74■■□□□ 1.39
SUMO3-205ENST00000466861 KIF5AQ12840 1032 aa23.74■■□□□ 1.39
SUMO3-205ENST00000466861 RFTN1Q14699 578 aaPredicted RBP23.74■■□□□ 1.39
SUMO3-205ENST00000466861 CARD16Q5EG05 197 aa23.74■■□□□ 1.39
SUMO3-205ENST00000466861 NPWQ8N729 165 aa23.74■■□□□ 1.39
SUMO3-205ENST00000466861 ACRBPQ8NEB7 543 aa23.74■■□□□ 1.39
SUMO3-205ENST00000466861 UBE2Q2Q8WVN8 375 aa23.74■■□□□ 1.39
SUMO3-205ENST00000466861 FAM131CQ96AQ9 280 aa23.74■■□□□ 1.39
SUMO3-205ENST00000466861 ZNF419Q96HQ0 510 aaPredicted RBP23.74■■□□□ 1.39
SUMO3-205ENST00000466861 CALN1Q9BXU9 219 aa23.74■■□□□ 1.39
SUMO3-205ENST00000466861 GON4LQ3T8J9 2241 aa23.74■■□□□ 1.39
SUMO3-205ENST00000466861 SLC7A4O43246 635 aa23.73■■□□□ 1.39
SUMO3-205ENST00000466861 FOXD2O60548 495 aaPredicted RBP23.73■■□□□ 1.39
SUMO3-205ENST00000466861 CHRNA3P32297 505 aa23.73■■□□□ 1.39
SUMO3-205ENST00000466861 SNRPD1P62314 119 aaKnown RBP23.73■■□□□ 1.39
SUMO3-205ENST00000466861 RPL6Q02878 288 aaKnown RBP23.73■■□□□ 1.39
SUMO3-205ENST00000466861 PAFAH1B3Q15102 231 aaKnown RBP23.73■■□□□ 1.39
SUMO3-205ENST00000466861 ANKRD20A8PQ5CZ79 823 aa23.73■■□□□ 1.39
SUMO3-205ENST00000466861 ZFYVE27Q5T4F4 411 aa23.73■■□□□ 1.39
SUMO3-205ENST00000466861 LRRC8AQ8IWT6 810 aa23.73■■□□□ 1.39
SUMO3-205ENST00000466861 TOE1Q96GM8 510 aaKnown RBP23.73■■□□□ 1.39
SUMO3-205ENST00000466861 CELF6Q96J87 481 aaKnown RBP23.73■■□□□ 1.39
SUMO3-205ENST00000466861 ZNF599Q96NL3 588 aa23.73■■□□□ 1.39
SUMO3-205ENST00000466861 BTBD1Q9H0C5 482 aa23.73■■□□□ 1.39
SUMO3-205ENST00000466861 FBXL12Q9NXK8 326 aa23.73■■□□□ 1.39
SUMO3-205ENST00000466861 UBA2Q9UBT2 640 aaPredicted RBP23.73■■□□□ 1.39
SUMO3-205ENST00000466861 TPX2Q9ULW0 747 aaKnown RBP23.73■■□□□ 1.39
SUMO3-205ENST00000466861 FCF1Q9Y324 198 aaKnown RBP23.73■■□□□ 1.39
SUMO3-205ENST00000466861 TNRC6BQ9UPQ9 1833 aaKnown RBP23.73■■□□□ 1.39
SUMO3-205ENST00000466861 MID1O15344 667 aa23.72■■□□□ 1.39
SUMO3-205ENST00000466861 TMCC1O94876 653 aa23.72■■□□□ 1.39
SUMO3-205ENST00000466861 IL1BP01584 269 aa23.72■■□□□ 1.39
SUMO3-205ENST00000466861 CD48P09326 243 aa23.72■■□□□ 1.39
SUMO3-205ENST00000466861 HOXD11P31277 338 aaPredicted RBP23.72■■□□□ 1.39
SUMO3-205ENST00000466861 HOXD12P35452 270 aa23.72■■□□□ 1.39
SUMO3-205ENST00000466861 GJC1P36383 396 aa23.72■■□□□ 1.39
SUMO3-205ENST00000466861 ODF2Q5BJF6 829 aa23.72■■□□□ 1.39
SUMO3-205ENST00000466861 FRMD1Q8N878 549 aa23.72■■□□□ 1.39
SUMO3-205ENST00000466861 OR2AP1Q8NGE2 309 aa23.72■■□□□ 1.39
SUMO3-205ENST00000466861 PCDH19Q8TAB3 1148 aa23.72■■□□□ 1.39
SUMO3-205ENST00000466861 PIP4K2CQ8TBX8 421 aa23.72■■□□□ 1.39
SUMO3-205ENST00000466861 HEPHQ9BQS7 1158 aa23.72■■□□□ 1.39
SUMO3-205ENST00000466861 LACRTQ9GZZ8 138 aa23.72■■□□□ 1.39
SUMO3-205ENST00000466861 KDM4CQ9H3R0 1056 aa23.72■■□□□ 1.39
SUMO3-205ENST00000466861 ETNK2Q9NVF9 386 aa23.72■■□□□ 1.39
SUMO3-205ENST00000466861 IPO11Q9UI26 975 aaKnown RBP23.72■■□□□ 1.39
SUMO3-205ENST00000466861 SALL4Q9UJQ4 1053 aa23.72■■□□□ 1.39
SUMO3-205ENST00000466861 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.72■■□□□ 1.39
SUMO3-205ENST00000466861 NUMA1Q14980 2115 aa23.72■■□□□ 1.39
SUMO3-205ENST00000466861 VPS13AQ96RL7 3174 aa23.72■■□□□ 1.39
SUMO3-205ENST00000466861 BCLAF3A2AJT9 711 aaKnown RBP23.71■■□□□ 1.39
SUMO3-205ENST00000466861 PSMD8P48556 350 aa23.71■■□□□ 1.39
SUMO3-205ENST00000466861 MMRN1Q13201 1228 aa23.71■■□□□ 1.39
SUMO3-205ENST00000466861 LPAL2Q16609 132 aa23.71■■□□□ 1.39
SUMO3-205ENST00000466861 DPY19L3Q6ZPD9 716 aa23.71■■□□□ 1.39
SUMO3-205ENST00000466861 DAAM2Q86T65 1068 aa23.71■■□□□ 1.39
SUMO3-205ENST00000466861 ALYREFQ86V81 257 aaKnown RBP23.71■■□□□ 1.39
SUMO3-205ENST00000466861 RAPGEF5Q92565 580 aa23.71■■□□□ 1.39
SUMO3-205ENST00000466861 GDAP1L1Q96MZ0 367 aa23.71■■□□□ 1.39
SUMO3-205ENST00000466861 RNF157Q96PX1 679 aa23.71■■□□□ 1.39
SUMO3-205ENST00000466861 OMDQ99983 421 aa23.71■■□□□ 1.39
SUMO3-205ENST00000466861 SP110Q9HB58 689 aa23.71■■□□□ 1.39
SUMO3-205ENST00000466861 CD93Q9NPY3 652 aa23.71■■□□□ 1.39
SUMO3-205ENST00000466861 IL36AQ9UHA7 158 aa23.71■■□□□ 1.39
SUMO3-205ENST00000466861 TFR2Q9UP52 801 aa23.71■■□□□ 1.39
SUMO3-205ENST00000466861 MFHAS1Q9Y4C4 1052 aa23.71■■□□□ 1.39
SUMO3-205ENST00000466861 LRRD1A4D1F6 860 aa23.7■■□□□ 1.38
SUMO3-205ENST00000466861 DFFAO00273 331 aa23.7■■□□□ 1.38
SUMO3-205ENST00000466861 POP4O95707 220 aaKnown RBP23.7■■□□□ 1.38
SUMO3-205ENST00000466861 ZFXP17010 805 aaPredicted RBP23.7■■□□□ 1.38
SUMO3-205ENST00000466861 CCNHP51946 323 aaPredicted RBP23.7■■□□□ 1.38
SUMO3-205ENST00000466861 RAD51Q06609 339 aa23.7■■□□□ 1.38
SUMO3-205ENST00000466861 CACUL1Q86Y37 369 aa23.7■■□□□ 1.38
SUMO3-205ENST00000466861 ANP32BQ92688 251 aaKnown RBP23.7■■□□□ 1.38
SUMO3-205ENST00000466861 PPP1R16AQ96I34 528 aa23.7■■□□□ 1.38
SUMO3-205ENST00000466861 OSBPL1AQ9BXW6 950 aa23.7■■□□□ 1.38
SUMO3-205ENST00000466861 TSGA10Q9BZW7 698 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms