RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 STX3Q13277 289 aa15.43■□□□□ 0.06
SCAMP4-202ENST00000409472 DYNC1I2Q13409 638 aaKnown RBP15.43■□□□□ 0.06
SCAMP4-202ENST00000409472 PSMD5Q16401 504 aa15.43■□□□□ 0.06
SCAMP4-202ENST00000409472 ALFQ53S48 1182 aa15.43■□□□□ 0.06
SCAMP4-202ENST00000409472 MAVSQ7Z434 540 aa15.43■□□□□ 0.06
SCAMP4-202ENST00000409472 CIR1Q86X95 450 aaPredicted RBP15.43■□□□□ 0.06
SCAMP4-202ENST00000409472 RBM12BQ8IXT5 1001 aaKnown RBP15.43■□□□□ 0.06
SCAMP4-202ENST00000409472 ACMSDQ8TDX5 336 aa15.43■□□□□ 0.06
SCAMP4-202ENST00000409472 INPP5DQ92835 1189 aa15.43■□□□□ 0.06
SCAMP4-202ENST00000409472 TSGA13Q96PP4 275 aa15.43■□□□□ 0.06
SCAMP4-202ENST00000409472 IL12RB2Q99665 862 aa15.43■□□□□ 0.06
SCAMP4-202ENST00000409472 FAM167BQ9BTA0 163 aa15.43■□□□□ 0.06
SCAMP4-202ENST00000409472 MCMBPQ9BTE3 642 aa15.43■□□□□ 0.06
SCAMP4-202ENST00000409472 TRIM4Q9C037 500 aa15.43■□□□□ 0.06
SCAMP4-202ENST00000409472 LMCD1Q9NZU5 365 aa15.43■□□□□ 0.06
SCAMP4-202ENST00000409472 SLC2A6Q9UGQ3 507 aa15.43■□□□□ 0.06
SCAMP4-202ENST00000409472 TTC24A2A3L6 582 aaPredicted RBP15.43■□□□□ 0.06
SCAMP4-202ENST00000409472 ERI2A8K979 691 aaKnown RBP15.43■□□□□ 0.06
SCAMP4-202ENST00000409472 NT5C1B-RDH14C9J2C7 533 aa15.43■□□□□ 0.06
SCAMP4-202ENST00000409472 PDLIM1O00151 329 aa15.43■□□□□ 0.06
SCAMP4-202ENST00000409472 DNAJC6O75061 913 aa15.43■□□□□ 0.06
SCAMP4-202ENST00000409472 TRPA1O75762 1119 aa15.43■□□□□ 0.06
SCAMP4-202ENST00000409472 VNN2O95498 520 aa15.43■□□□□ 0.06
SCAMP4-202ENST00000409472 EOMESO95936 686 aa15.43■□□□□ 0.06
SCAMP4-202ENST00000409472 ALDH1A1P00352 501 aa15.43■□□□□ 0.06
SCAMP4-202ENST00000409472 CCNCP24863 283 aa15.43■□□□□ 0.06
SCAMP4-202ENST00000409472 GABRB3P28472 473 aa15.43■□□□□ 0.06
SCAMP4-202ENST00000409472 ABL2P42684 1182 aa15.43■□□□□ 0.06
SCAMP4-202ENST00000409472 ZNF135P52742 658 aaPredicted RBP15.43■□□□□ 0.06
SCAMP4-202ENST00000409472 EFEMP1Q12805 493 aa15.43■□□□□ 0.06
SCAMP4-202ENST00000409472 MTA1Q13330 715 aa15.43■□□□□ 0.06
SCAMP4-202ENST00000409472 IHHQ14623 411 aa15.43■□□□□ 0.06
SCAMP4-202ENST00000409472 LBRQ14739 615 aaKnown RBP15.43■□□□□ 0.06
SCAMP4-202ENST00000409472 FAM171A1Q5VUB5 890 aa15.43■□□□□ 0.06
SCAMP4-202ENST00000409472 RINLQ6ZS11 566 aa15.43■□□□□ 0.06
SCAMP4-202ENST00000409472 MYEOVQ96EZ4 313 aa15.43■□□□□ 0.06
SCAMP4-202ENST00000409472 SORT1Q99523 831 aa15.43■□□□□ 0.06
SCAMP4-202ENST00000409472 TBL1YQ9BQ87 522 aa15.43■□□□□ 0.06
SCAMP4-202ENST00000409472 IL22Q9GZX6 179 aa15.43■□□□□ 0.06
SCAMP4-202ENST00000409472 GLOD4Q9HC38 313 aa15.43■□□□□ 0.06
SCAMP4-202ENST00000409472 STARD7Q9NQZ5 370 aa15.43■□□□□ 0.06
SCAMP4-202ENST00000409472 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 SAT1P21673 171 aa15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 ARNTP27540 789 aa15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 CYP2C18P33260 490 aa15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 FAM189BP81408 668 aa15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 MPP3Q13368 585 aa15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 GRTP1Q5TC63 336 aa15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 AFMIDQ63HM1 303 aa15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 MIB1Q86YT6 1006 aa15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 DENND6AQ8IWF6 608 aa15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 KLHDC8BQ8IXV7 354 aa15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 ZNF683Q8IZ20 524 aa15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 NUP93Q8N1F7 819 aa15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 RTL3Q8N8U3 475 aaKnown RBP15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 PPP1R14CQ8TAE6 165 aa15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 URGCPQ8TCY9 931 aa15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 SLC39A13Q96H72 371 aa15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 VPS39Q96JC1 886 aa15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 KLHL5Q96PQ7 755 aa15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 FTHL17Q9BXU8 183 aa15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 CADM1Q9BY67 442 aaKnown RBP15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 MARCH5Q9NX47 278 aa15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 SCML2Q9UQR0 700 aa15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 DNAJC16Q9Y2G8 782 aa15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 SQORQ9Y6N5 450 aa15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 SCN5AQ14524 2016 aa15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 DPPA5A6NC42 116 aa15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 TRAFD1O14545 582 aaPredicted RBP15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 TADA2AO75478 443 aa15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 CABYRO75952 493 aa15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 INHAP05111 366 aa15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 HMBSP08397 361 aa15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 HAPLN1P10915 354 aaPredicted RBP15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 MAXP61244 160 aa15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 MPP1Q00013 466 aa15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 ZNF460Q14592 562 aa15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 GRM3Q14832 879 aa15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 PCSK7Q16549 785 aa15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 CTXN3Q4LDR2 81 aa15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 ARMC3Q5W041 872 aa15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 NAPEPLDQ6IQ20 393 aa15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 NAPRTQ6XQN6 538 aa15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 CRLF3Q8IUI8 442 aa15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 MFSD6LQ8IWD5 586 aa15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 TRIM42Q8IWZ5 723 aa15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 ISL2Q96A47 359 aa15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 SAR1AQ9NR31 198 aa15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 RBM22Q9NW64 420 aaKnown RBP eCLIP15.42■□□□□ 0.063e-6■■■■■ 29.5
SCAMP4-202ENST00000409472 KCNK4Q9NYG8 393 aa15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 COPG2Q9UBF2 871 aa15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 PPARGC1AQ9UBK2 798 aaKnown RBP15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 NKX1-2Q9UD57 310 aaPredicted RBP15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 LNPEPQ9UIQ6 1025 aa15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 GREB1Q4ZG55 1949 aa15.42■□□□□ 0.06
SCAMP4-202ENST00000409472 MIA3Q5JRA6 1907 aa15.41■□□□□ 0.06
SCAMP4-202ENST00000409472 A0A096LPK6 155 aa15.41■□□□□ 0.06
SCAMP4-202ENST00000409472 TMEM189-UBE2V1I3L0A0 370 aa15.41■□□□□ 0.06
SCAMP4-202ENST00000409472 J3KR12 359 aa15.41■□□□□ 0.06
SCAMP4-202ENST00000409472 MATN3O15232 486 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms