RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 TNIP2Q8NFZ5 429 aa17.91■□□□□ 0.46
SNED1-204ENST00000401884 MFSD3Q96ES6 412 aa17.91■□□□□ 0.46
SNED1-204ENST00000401884 CLPTM1LQ96KA5 538 aa17.91■□□□□ 0.46
SNED1-204ENST00000401884 QKIQ96PU8 341 aaKnown RBP eCLIP17.91■□□□□ 0.46
SNED1-204ENST00000401884 ARHGEF3Q9NR81 526 aa17.91■□□□□ 0.46
SNED1-204ENST00000401884 SLC12A4Q9UP95 1085 aa17.91■□□□□ 0.46
SNED1-204ENST00000401884 SMIM35A0A1B0GVV1 85 aa17.91■□□□□ 0.46
SNED1-204ENST00000401884 TCRBV7S3A2A0A539 114 aa17.91■□□□□ 0.46
SNED1-204ENST00000401884 GCATO75600 419 aa17.91■□□□□ 0.46
SNED1-204ENST00000401884 MRPS6P82932 125 aaKnown RBP17.91■□□□□ 0.46
SNED1-204ENST00000401884 INSCQ1MX18 579 aa17.91■□□□□ 0.46
SNED1-204ENST00000401884 OTUD3Q5T2D3 398 aaPredicted RBP17.91■□□□□ 0.46
SNED1-204ENST00000401884 ELMSAN1Q6PJG2 1045 aa17.91■□□□□ 0.46
SNED1-204ENST00000401884 RCN3Q96D15 328 aa17.91■□□□□ 0.46
SNED1-204ENST00000401884 DACH2Q96NX9 599 aa17.91■□□□□ 0.46
SNED1-204ENST00000401884 DPEP3Q9H4B8 488 aa17.91■□□□□ 0.46
SNED1-204ENST00000401884 DYRK4Q9NR20 520 aa17.91■□□□□ 0.46
SNED1-204ENST00000401884 CHRAC1Q9NRG0 131 aa17.91■□□□□ 0.46
SNED1-204ENST00000401884 FETUBQ9UGM5 382 aa17.91■□□□□ 0.46
SNED1-204ENST00000401884 TMEM114B3SHH9 223 aa17.91■□□□□ 0.46
SNED1-204ENST00000401884 BTN3A1O00481 513 aa17.91■□□□□ 0.46
SNED1-204ENST00000401884 SYNCRIPO60506 623 aaKnown RBP17.91■□□□□ 0.46
SNED1-204ENST00000401884 TSPAN8P19075 237 aa17.91■□□□□ 0.46
SNED1-204ENST00000401884 BRCC3P46736 316 aa17.91■□□□□ 0.46
SNED1-204ENST00000401884 LRRC74AQ0VAA2 488 aa17.91■□□□□ 0.46
SNED1-204ENST00000401884 C1orf220Q5T0J3 134 aa17.91■□□□□ 0.46
SNED1-204ENST00000401884 MIER2Q8N344 545 aa17.91■□□□□ 0.46
SNED1-204ENST00000401884 SOCS4Q8WXH5 440 aa17.91■□□□□ 0.46
SNED1-204ENST00000401884 DLG3Q92796 817 aa17.91■□□□□ 0.46
SNED1-204ENST00000401884 FAXDC2Q96IV6 333 aa17.91■□□□□ 0.46
SNED1-204ENST00000401884 NSMCE2Q96MF7 247 aa17.91■□□□□ 0.46
SNED1-204ENST00000401884 SEMA6AQ9H2E6 1030 aa17.91■□□□□ 0.46
SNED1-204ENST00000401884 ACTR8Q9H981 624 aa17.91■□□□□ 0.46
SNED1-204ENST00000401884 COG4Q9H9E3 785 aa17.91■□□□□ 0.46
SNED1-204ENST00000401884 POLG2Q9UHN1 485 aa17.91■□□□□ 0.46
SNED1-204ENST00000401884 PHRF1Q9P1Y6 1649 aaKnown RBP17.91■□□□□ 0.46
SNED1-204ENST00000401884 C22orf31O95567 290 aa17.9■□□□□ 0.46
SNED1-204ENST00000401884 MMP3P08254 477 aa17.9■□□□□ 0.46
SNED1-204ENST00000401884 ITGB6P18564 788 aa17.9■□□□□ 0.46
SNED1-204ENST00000401884 LRPAP1P30533 357 aa17.9■□□□□ 0.46
SNED1-204ENST00000401884 RAP1GAP2Q684P5 730 aa17.9■□□□□ 0.46
SNED1-204ENST00000401884 C6orf89Q6UWU4 347 aa17.9■□□□□ 0.46
SNED1-204ENST00000401884 GLT6D1Q7Z4J2 308 aa17.9■□□□□ 0.46
SNED1-204ENST00000401884 MRPL57Q9BQC6 102 aaKnown RBP17.9■□□□□ 0.46
SNED1-204ENST00000401884 MINDY3Q9H8M7 445 aa17.9■□□□□ 0.46
SNED1-204ENST00000401884 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.9■□□□□ 0.46
SNED1-204ENST00000401884 SEPT3Q9UH03 358 aa17.9■□□□□ 0.46
SNED1-204ENST00000401884 WNT3AP56704 352 aa17.9■□□□□ 0.46
SNED1-204ENST00000401884 ST8SIA6P61647 398 aa17.9■□□□□ 0.46
SNED1-204ENST00000401884 MAP2K5Q13163 448 aa17.9■□□□□ 0.46
SNED1-204ENST00000401884 NRF1Q16656 503 aa17.9■□□□□ 0.46
SNED1-204ENST00000401884 RP9Q8TA86 221 aaKnown RBP17.9■□□□□ 0.46
SNED1-204ENST00000401884 STARD7Q9NQZ5 370 aa17.9■□□□□ 0.46
SNED1-204ENST00000401884 TAS2R1Q9NYW7 299 aa17.9■□□□□ 0.46
SNED1-204ENST00000401884 DTLQ9NZJ0 730 aa17.9■□□□□ 0.46
SNED1-204ENST00000401884 MCM8Q9UJA3 840 aa17.9■□□□□ 0.46
SNED1-204ENST00000401884 AP4S1Q9Y587 144 aa17.9■□□□□ 0.46
SNED1-204ENST00000401884 M0R3G1 203 aa17.9■□□□□ 0.46
SNED1-204ENST00000401884 PLIN3O60664 434 aa17.9■□□□□ 0.46
SNED1-204ENST00000401884 KATNA1O75449 491 aa17.9■□□□□ 0.46
SNED1-204ENST00000401884 GUCA1CO95843 209 aa17.9■□□□□ 0.46
SNED1-204ENST00000401884 FMO4P31512 558 aa17.9■□□□□ 0.46
SNED1-204ENST00000401884 RPL9P32969 192 aaKnown RBP17.9■□□□□ 0.46
SNED1-204ENST00000401884 CLCN5P51795 746 aa17.9■□□□□ 0.46
SNED1-204ENST00000401884 TCEAL1Q15170 157 aa17.9■□□□□ 0.46
SNED1-204ENST00000401884 TTC7BQ86TV6 843 aa17.9■□□□□ 0.46
SNED1-204ENST00000401884 KCTD14Q9BQ13 255 aaPredicted RBP17.9■□□□□ 0.46
SNED1-204ENST00000401884 SFMBT1Q9UHJ3 866 aa17.9■□□□□ 0.46
SNED1-204ENST00000401884 MANSC4A6NHS7 340 aaPredicted RBP17.9■□□□□ 0.46
SNED1-204ENST00000401884 SMNDC1O75940 238 aaKnown RBP eCLIP17.9■□□□□ 0.46
SNED1-204ENST00000401884 METTL18O95568 372 aa17.9■□□□□ 0.46
SNED1-204ENST00000401884 FCGR1AP12314 374 aa17.9■□□□□ 0.46
SNED1-204ENST00000401884 POU5F1Q01860 360 aaKnown RBP17.9■□□□□ 0.46
SNED1-204ENST00000401884 KRT72Q14CN4 511 aa17.9■□□□□ 0.46
SNED1-204ENST00000401884 DDX53Q86TM3 631 aaKnown RBP17.9■□□□□ 0.46
SNED1-204ENST00000401884 P3H2Q8IVL5 708 aa17.9■□□□□ 0.46
SNED1-204ENST00000401884 FAM126BQ8IXS8 530 aa17.9■□□□□ 0.46
SNED1-204ENST00000401884 MRPS31Q92665 395 aaKnown RBP17.9■□□□□ 0.46
SNED1-204ENST00000401884 SEMA3CQ99985 751 aa17.9■□□□□ 0.46
SNED1-204ENST00000401884 MPP6Q9NZW5 540 aa17.9■□□□□ 0.46
SNED1-204ENST00000401884 ATP6V1B2P21281 511 aa17.89■□□□□ 0.45
SNED1-204ENST00000401884 SERPINB10P48595 397 aa17.89■□□□□ 0.45
SNED1-204ENST00000401884 AIF1P55008 147 aa17.89■□□□□ 0.45
SNED1-204ENST00000401884 LILRA4P59901 499 aa17.89■□□□□ 0.45
SNED1-204ENST00000401884 DMC1Q14565 340 aa17.89■□□□□ 0.45
SNED1-204ENST00000401884 UBA2Q9UBT2 640 aaPredicted RBP17.89■□□□□ 0.45
SNED1-204ENST00000401884 PTPRJQ12913 1337 aa17.89■□□□□ 0.45
SNED1-204ENST00000401884 LAMB4A4D0S4 1761 aa17.89■□□□□ 0.45
SNED1-204ENST00000401884 CNTNAP1P78357 1384 aa17.89■□□□□ 0.45
SNED1-204ENST00000401884 HOXA2O43364 376 aa17.89■□□□□ 0.45
SNED1-204ENST00000401884 TM7SF2O76062 418 aa17.89■□□□□ 0.45
SNED1-204ENST00000401884 PIRTP0C851 137 aa17.89■□□□□ 0.45
SNED1-204ENST00000401884 LMO2P25791 158 aa17.89■□□□□ 0.45
SNED1-204ENST00000401884 ECHS1P30084 290 aa17.89■□□□□ 0.45
SNED1-204ENST00000401884 PPP3CCP48454 512 aa17.89■□□□□ 0.45
SNED1-204ENST00000401884 PSME3P61289 254 aa17.89■□□□□ 0.45
SNED1-204ENST00000401884 KHDC1Q4VXA5 237 aaKnown RBP17.89■□□□□ 0.45
SNED1-204ENST00000401884 LRRC49Q8IUZ0 686 aa17.89■□□□□ 0.45
SNED1-204ENST00000401884 ZNF567Q8N184 647 aa17.89■□□□□ 0.45
SNED1-204ENST00000401884 PTGR2Q8N8N7 351 aaPredicted RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms