RNA–Protein interactions for RNA: ENST00000369091.6

PRDM1-202, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 2,612 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-202ENST00000369091 GLT1D1Q96MS3 346 aa19.03■□□□□ 0.64
PRDM1-202ENST00000369091 ARPC5LQ9BPX5 153 aa19.03■□□□□ 0.64
PRDM1-202ENST00000369091 PDZD7Q9H5P4 517 aa19.03■□□□□ 0.64
PRDM1-202ENST00000369091 VRTNQ9H8Y1 702 aa19.03■□□□□ 0.64
PRDM1-202ENST00000369091 TXNDC16Q9P2K2 825 aa19.03■□□□□ 0.64
PRDM1-202ENST00000369091 AP4E1Q9UPM8 1137 aa19.03■□□□□ 0.64
PRDM1-202ENST00000369091 RAP2CQ9Y3L5 183 aa19.03■□□□□ 0.64
PRDM1-202ENST00000369091 FER1L6Q2WGJ9 1857 aa19.02■□□□□ 0.64
PRDM1-202ENST00000369091 COL5A3P25940 1745 aaPredicted RBP19.02■□□□□ 0.64
PRDM1-202ENST00000369091 TANC1Q9C0D5 1861 aa19.02■□□□□ 0.64
PRDM1-202ENST00000369091 A0A1W2PQ67 120 aa19.02■□□□□ 0.64
PRDM1-202ENST00000369091 TK2O00142 265 aa19.02■□□□□ 0.64
PRDM1-202ENST00000369091 GRAP2O75791 330 aa19.02■□□□□ 0.64
PRDM1-202ENST00000369091 BMP2P12643 396 aa19.02■□□□□ 0.64
PRDM1-202ENST00000369091 NCAM1P13591 858 aa19.02■□□□□ 0.64
PRDM1-202ENST00000369091 GRIA4P48058 902 aa19.02■□□□□ 0.64
PRDM1-202ENST00000369091 ARPC4P59998 168 aa19.02■□□□□ 0.64
PRDM1-202ENST00000369091 IFITM2Q01629 132 aa19.02■□□□□ 0.64
PRDM1-202ENST00000369091 MTMR1Q13613 665 aa19.02■□□□□ 0.64
PRDM1-202ENST00000369091 PDK2Q15119 407 aa19.02■□□□□ 0.64
PRDM1-202ENST00000369091 FAM219BQ5XKK7 198 aa19.02■□□□□ 0.64
PRDM1-202ENST00000369091 MFSD2AQ8NA29 543 aa19.02■□□□□ 0.64
PRDM1-202ENST00000369091 PCDH19Q8TAB3 1148 aa19.02■□□□□ 0.64
PRDM1-202ENST00000369091 ACER1Q8TDN7 264 aa19.02■□□□□ 0.64
PRDM1-202ENST00000369091 ZC3H15Q8WU90 426 aaKnown RBP19.02■□□□□ 0.64
PRDM1-202ENST00000369091 SNX19Q92543 992 aa19.02■□□□□ 0.64
PRDM1-202ENST00000369091 POLE4Q9NR33 117 aa19.02■□□□□ 0.64
PRDM1-202ENST00000369091 MRPL11Q9Y3B7 192 aaKnown RBP19.02■□□□□ 0.64
PRDM1-202ENST00000369091 AHDC1Q5TGY3 1603 aaPredicted RBP19.02■□□□□ 0.63
PRDM1-202ENST00000369091 RNF103-CHMP3A0A140T963 221 aa19.02■□□□□ 0.63
PRDM1-202ENST00000369091 BCLAF3A2AJT9 711 aaKnown RBP19.02■□□□□ 0.63
PRDM1-202ENST00000369091 KPNA7A9QM74 516 aa19.02■□□□□ 0.63
PRDM1-202ENST00000369091 RAP1GAPP47736 663 aa19.02■□□□□ 0.63
PRDM1-202ENST00000369091 ADAM17P78536 824 aa19.02■□□□□ 0.63
PRDM1-202ENST00000369091 DGKDQ16760 1214 aa19.02■□□□□ 0.63
PRDM1-202ENST00000369091 CA9Q16790 459 aa19.02■□□□□ 0.63
PRDM1-202ENST00000369091 SCYL2Q6P3W7 929 aa19.02■□□□□ 0.63
PRDM1-202ENST00000369091 ACVR1CQ8NER5 493 aa19.02■□□□□ 0.63
PRDM1-202ENST00000369091 CAPSLQ8WWF8 208 aa19.02■□□□□ 0.63
PRDM1-202ENST00000369091 SH3YL1Q96HL8 342 aaPredicted RBP19.02■□□□□ 0.63
PRDM1-202ENST00000369091 EFHD1Q9BUP0 239 aa19.02■□□□□ 0.63
PRDM1-202ENST00000369091 UNC93B1Q9H1C4 597 aa19.02■□□□□ 0.63
PRDM1-202ENST00000369091 TMEM9Q9P0T7 183 aa19.02■□□□□ 0.63
PRDM1-202ENST00000369091 SEPT3Q9UH03 358 aa19.02■□□□□ 0.63
PRDM1-202ENST00000369091 A0A096LPK6 155 aa19.01■□□□□ 0.63
PRDM1-202ENST00000369091 ATG7O95352 703 aa19.01■□□□□ 0.63
PRDM1-202ENST00000369091 YBX3P16989 372 aaKnown RBP eCLIP19.01■□□□□ 0.63
PRDM1-202ENST00000369091 HSD17B4P51659 736 aa19.01■□□□□ 0.63
PRDM1-202ENST00000369091 SPCS2Q15005 226 aa19.01■□□□□ 0.63
PRDM1-202ENST00000369091 AGAP7PQ5VUJ5 663 aa19.01■□□□□ 0.63
PRDM1-202ENST00000369091 REP15Q6BDI9 236 aa19.01■□□□□ 0.63
PRDM1-202ENST00000369091 PIGZQ86VD9 579 aa19.01■□□□□ 0.63
PRDM1-202ENST00000369091 HMGCLL1Q8TB92 370 aa19.01■□□□□ 0.63
PRDM1-202ENST00000369091 MTMR12Q9C0I1 747 aa19.01■□□□□ 0.63
PRDM1-202ENST00000369091 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.01■□□□□ 0.63
PRDM1-202ENST00000369091 PSME4Q14997 1843 aa19.01■□□□□ 0.63
PRDM1-202ENST00000369091 TOR1BO14657 336 aa19.01■□□□□ 0.63
PRDM1-202ENST00000369091 TPSB2P20231 275 aa19.01■□□□□ 0.63
PRDM1-202ENST00000369091 MZF1P28698 734 aaPredicted RBP19.01■□□□□ 0.63
PRDM1-202ENST00000369091 EEF1DP29692 281 aaKnown RBP19.01■□□□□ 0.63
PRDM1-202ENST00000369091 GRSF1Q12849 480 aaKnown RBP eCLIP19.01■□□□□ 0.63
PRDM1-202ENST00000369091 TPSAB1Q15661 275 aa19.01■□□□□ 0.63
PRDM1-202ENST00000369091 FAM102AQ5T9C2 384 aaPredicted RBP19.01■□□□□ 0.63
PRDM1-202ENST00000369091 ABRAXAS1Q6UWZ7 409 aa19.01■□□□□ 0.63
PRDM1-202ENST00000369091 UTS2BQ765I0 119 aa19.01■□□□□ 0.63
PRDM1-202ENST00000369091 CCDC60Q8IWA6 550 aaPredicted RBP19.01■□□□□ 0.63
PRDM1-202ENST00000369091 NAT16Q8N8M0 369 aa19.01■□□□□ 0.63
PRDM1-202ENST00000369091 SLC4A11Q8NBS3 891 aa19.01■□□□□ 0.63
PRDM1-202ENST00000369091 FEM1CQ96JP0 617 aa19.01■□□□□ 0.63
PRDM1-202ENST00000369091 POLR3FQ9H1D9 316 aaPredicted RBP19.01■□□□□ 0.63
PRDM1-202ENST00000369091 FBXO28Q9NVF7 368 aa19.01■□□□□ 0.63
PRDM1-202ENST00000369091 CACNA2D2Q9NY47 1150 aa19.01■□□□□ 0.63
PRDM1-202ENST00000369091 FAM198AQ9UFP1 575 aa19.01■□□□□ 0.63
PRDM1-202ENST00000369091 FIS1Q9Y3D6 152 aa19.01■□□□□ 0.63
PRDM1-202ENST00000369091 SNX9Q9Y5X1 595 aa19.01■□□□□ 0.63
PRDM1-202ENST00000369091 SLC22A2O15244 555 aa19■□□□□ 0.63
PRDM1-202ENST00000369091 ASS1P00966 412 aaKnown RBP19■□□□□ 0.63
PRDM1-202ENST00000369091 EEF1B2P24534 225 aaKnown RBP19■□□□□ 0.63
PRDM1-202ENST00000369091 NR4A2P43354 598 aa19■□□□□ 0.63
PRDM1-202ENST00000369091 NAGLUP54802 743 aa19■□□□□ 0.63
PRDM1-202ENST00000369091 ENPEPQ07075 957 aa19■□□□□ 0.63
PRDM1-202ENST00000369091 DOK7Q18PE1 504 aa19■□□□□ 0.63
PRDM1-202ENST00000369091 FAM209AQ5JX71 171 aa19■□□□□ 0.63
PRDM1-202ENST00000369091 CAMK1DQ8IU85 385 aa19■□□□□ 0.63
PRDM1-202ENST00000369091 NETO2Q8NC67 525 aa19■□□□□ 0.63
PRDM1-202ENST00000369091 ARNTL2Q8WYA1 636 aa19■□□□□ 0.63
PRDM1-202ENST00000369091 PIWIL1Q96J94 861 aaKnown RBP19■□□□□ 0.63
PRDM1-202ENST00000369091 ZNF347Q96SE7 839 aa19■□□□□ 0.63
PRDM1-202ENST00000369091 MSTO1Q9BUK6 570 aa19■□□□□ 0.63
PRDM1-202ENST00000369091 RAD21L1Q9H4I0 556 aa19■□□□□ 0.63
PRDM1-202ENST00000369091 ANKEF1Q9NU02 776 aa19■□□□□ 0.63
PRDM1-202ENST00000369091 SYBUQ9NX95 663 aa19■□□□□ 0.63
PRDM1-202ENST00000369091 RSL1D1O76021 490 aaKnown RBP19■□□□□ 0.63
PRDM1-202ENST00000369091 YWHAEP62258 255 aaKnown RBP19■□□□□ 0.63
PRDM1-202ENST00000369091 GBE1Q04446 702 aa19■□□□□ 0.63
PRDM1-202ENST00000369091 TBCELQ5QJ74 424 aa19■□□□□ 0.63
PRDM1-202ENST00000369091 CLIP4Q8N3C7 705 aa19■□□□□ 0.63
PRDM1-202ENST00000369091 SGCDQ92629 289 aa19■□□□□ 0.63
PRDM1-202ENST00000369091 NMRAL1Q9HBL8 299 aa19■□□□□ 0.63
PRDM1-202ENST00000369091 OXSMQ9NWU1 459 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms