RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 SPON2Q9BUD6 331 aa18.63■□□□□ 0.57
VCX3A-203ENST00000612369 EDEM3Q9BZQ6 932 aa18.63■□□□□ 0.57
VCX3A-203ENST00000612369 CEP44Q9C0F1 390 aa18.63■□□□□ 0.57
VCX3A-203ENST00000612369 RAB6CQ9H0N0 254 aa18.63■□□□□ 0.57
VCX3A-203ENST00000612369 ATP13A1Q9HD20 1204 aa18.63■□□□□ 0.57
VCX3A-203ENST00000612369 PCDHB9Q9Y5E1 797 aa18.63■□□□□ 0.57
VCX3A-203ENST00000612369 SLCO1B1Q9Y6L6 691 aa18.63■□□□□ 0.57
VCX3A-203ENST00000612369 TBC1D3DA0A087WVF3 549 aa18.62■□□□□ 0.57
VCX3A-203ENST00000612369 TBC1D3IA0A087WXS9 549 aa18.62■□□□□ 0.57
VCX3A-203ENST00000612369 TBC1D3EA0A087X179 549 aa18.62■□□□□ 0.57
VCX3A-203ENST00000612369 TBC1D3KA0A087X1G2 549 aa18.62■□□□□ 0.57
VCX3A-203ENST00000612369 TBC1D3FA6NER0 549 aaPredicted RBP18.62■□□□□ 0.57
VCX3A-203ENST00000612369 TBC1D3LB9A6J9 549 aa18.62■□□□□ 0.57
VCX3A-203ENST00000612369 CBX4O00257 560 aa18.62■□□□□ 0.57
VCX3A-203ENST00000612369 VILLO15195 856 aa18.62■□□□□ 0.57
VCX3A-203ENST00000612369 LATO43561 262 aa18.62■□□□□ 0.57
VCX3A-203ENST00000612369 PLRG1O43660 514 aaKnown RBP18.62■□□□□ 0.57
VCX3A-203ENST00000612369 SH3BP5O60239 455 aa18.62■□□□□ 0.57
VCX3A-203ENST00000612369 DFNA5O60443 496 aa18.62■□□□□ 0.57
VCX3A-203ENST00000612369 ZMPSTE24O75844 475 aa18.62■□□□□ 0.57
VCX3A-203ENST00000612369 TRIM16O95361 564 aa18.62■□□□□ 0.57
VCX3A-203ENST00000612369 PRNPP04156 253 aa18.62■□□□□ 0.57
VCX3A-203ENST00000612369 TBC1D3HP0C7X1 549 aa18.62■□□□□ 0.57
VCX3A-203ENST00000612369 PTMSP20962 102 aa18.62■□□□□ 0.57
VCX3A-203ENST00000612369 CHRNA3P32297 505 aa18.62■□□□□ 0.57
VCX3A-203ENST00000612369 RECQLP46063 649 aaPredicted RBP18.62■□□□□ 0.57
VCX3A-203ENST00000612369 AIF1P55008 147 aa18.62■□□□□ 0.57
VCX3A-203ENST00000612369 TPM4P67936 248 aa18.62■□□□□ 0.57
VCX3A-203ENST00000612369 SIM1P81133 766 aaPredicted RBP18.62■□□□□ 0.57
VCX3A-203ENST00000612369 PPP1R15BQ5SWA1 713 aa18.62■□□□□ 0.57
VCX3A-203ENST00000612369 TBC1D3GQ6DHY5 549 aa18.62■□□□□ 0.57
VCX3A-203ENST00000612369 TBC1D3CQ6IPX1 549 aa18.62■□□□□ 0.57
VCX3A-203ENST00000612369 DBX2Q6ZNG2 339 aa18.62■□□□□ 0.57
VCX3A-203ENST00000612369 SLFN11Q7Z7L1 901 aa18.62■□□□□ 0.57
VCX3A-203ENST00000612369 NAXDQ8IW45 347 aa18.62■□□□□ 0.57
VCX3A-203ENST00000612369 TBC1D3Q8IZP1 549 aaPredicted RBP18.62■□□□□ 0.57
VCX3A-203ENST00000612369 OR2A12Q8NGT7 310 aa18.62■□□□□ 0.57
VCX3A-203ENST00000612369 TBC1D31Q96DN5 1066 aa18.62■□□□□ 0.57
VCX3A-203ENST00000612369 ACE2Q9BYF1 805 aaPredicted RBP18.62■□□□□ 0.57
VCX3A-203ENST00000612369 TMEM248Q9NWD8 314 aa18.62■□□□□ 0.57
VCX3A-203ENST00000612369 AIPL1Q9NZN9 384 aa18.62■□□□□ 0.57
VCX3A-203ENST00000612369 SNX11Q9Y5W9 270 aa18.62■□□□□ 0.57
VCX3A-203ENST00000612369 LRRC53A6NM62 1247 aa18.61■□□□□ 0.57
VCX3A-203ENST00000612369 SMAD6O43541 496 aaKnown RBP18.61■□□□□ 0.57
VCX3A-203ENST00000612369 BNIP3LO60238 219 aa18.61■□□□□ 0.57
VCX3A-203ENST00000612369 LRIG2O94898 1065 aa18.61■□□□□ 0.57
VCX3A-203ENST00000612369 PLEKP08567 350 aaPredicted RBP18.61■□□□□ 0.57
VCX3A-203ENST00000612369 RRM1P23921 792 aa18.61■□□□□ 0.57
VCX3A-203ENST00000612369 CTSKP43235 329 aa18.61■□□□□ 0.57
VCX3A-203ENST00000612369 SERPINH1P50454 418 aaKnown RBP18.61■□□□□ 0.57
VCX3A-203ENST00000612369 C21orf59P57076 290 aa18.61■□□□□ 0.57
VCX3A-203ENST00000612369 GEMIN4P57678 1058 aaKnown RBP18.61■□□□□ 0.57
VCX3A-203ENST00000612369 CNTN1Q12860 1018 aa18.61■□□□□ 0.57
VCX3A-203ENST00000612369 FOXC1Q12948 553 aa18.61■□□□□ 0.57
VCX3A-203ENST00000612369 TRIP6Q15654 476 aaKnown RBP18.61■□□□□ 0.57
VCX3A-203ENST00000612369 ZNF423Q2M1K9 1284 aa18.61■□□□□ 0.57
VCX3A-203ENST00000612369 RWDD4Q6NW29 188 aaKnown RBP18.61■□□□□ 0.57
VCX3A-203ENST00000612369 C22orf39Q6P5X5 142 aa18.61■□□□□ 0.57
VCX3A-203ENST00000612369 DCUN1D2Q6PH85 259 aa18.61■□□□□ 0.57
VCX3A-203ENST00000612369 LINGO4Q6UY18 593 aa18.61■□□□□ 0.57
VCX3A-203ENST00000612369 PRPF39Q86UA1 669 aaKnown RBP18.61■□□□□ 0.57
VCX3A-203ENST00000612369 NLRP14Q86W24 1093 aa18.61■□□□□ 0.57
VCX3A-203ENST00000612369 DRC7Q8IY82 874 aa18.61■□□□□ 0.57
VCX3A-203ENST00000612369 PCDH20Q8N6Y1 951 aaKnown RBP18.61■□□□□ 0.57
VCX3A-203ENST00000612369 CCDC185Q8N715 623 aa18.61■□□□□ 0.57
VCX3A-203ENST00000612369 MCEEQ96PE7 176 aa18.61■□□□□ 0.57
VCX3A-203ENST00000612369 CNPY3Q9BT09 278 aa18.61■□□□□ 0.57
VCX3A-203ENST00000612369 MAGEH1Q9H213 219 aa18.61■□□□□ 0.57
VCX3A-203ENST00000612369 EBF2Q9HAK2 575 aa18.61■□□□□ 0.57
VCX3A-203ENST00000612369 IL21RQ9HBE5 538 aa18.61■□□□□ 0.57
VCX3A-203ENST00000612369 WASF3Q9UPY6 502 aa18.61■□□□□ 0.57
VCX3A-203ENST00000612369 FNDC3AQ9Y2H6 1198 aaKnown RBP18.61■□□□□ 0.57
VCX3A-203ENST00000612369 KNL1Q8NG31 2342 aa18.61■□□□□ 0.57
VCX3A-203ENST00000612369 SPAARA0A1B0GVQ0 90 aa18.6■□□□□ 0.57
VCX3A-203ENST00000612369 FAM72CH0Y354 149 aa18.6■□□□□ 0.57
VCX3A-203ENST00000612369 K7ERQ8 282 aa18.6■□□□□ 0.57
VCX3A-203ENST00000612369 FLRT2O43155 660 aa18.6■□□□□ 0.57
VCX3A-203ENST00000612369 CCP110O43303 1012 aa18.6■□□□□ 0.57
VCX3A-203ENST00000612369 SERPINC1P01008 464 aa18.6■□□□□ 0.57
VCX3A-203ENST00000612369 GZMAP12544 262 aa18.6■□□□□ 0.57
VCX3A-203ENST00000612369 GLDCP23378 1020 aa18.6■□□□□ 0.57
VCX3A-203ENST00000612369 CD38P28907 300 aa18.6■□□□□ 0.57
VCX3A-203ENST00000612369 L1CAMP32004 1257 aa18.6■□□□□ 0.57
VCX3A-203ENST00000612369 PRKCIP41743 596 aa18.6■□□□□ 0.57
VCX3A-203ENST00000612369 METAP1P53582 386 aa18.6■□□□□ 0.57
VCX3A-203ENST00000612369 RPL7AP62424 266 aaKnown RBP18.6■□□□□ 0.57
VCX3A-203ENST00000612369 NR1I3Q14994 352 aa18.6■□□□□ 0.57
VCX3A-203ENST00000612369 ASIC2Q16515 512 aa18.6■□□□□ 0.57
VCX3A-203ENST00000612369 SLC45A4Q5BKX6 768 aa18.6■□□□□ 0.57
VCX3A-203ENST00000612369 FIGNQ5HY92 759 aa18.6■□□□□ 0.57
VCX3A-203ENST00000612369 EFHC2Q5JST6 749 aa18.6■□□□□ 0.57
VCX3A-203ENST00000612369 FAM72AQ5TYM5 149 aa18.6■□□□□ 0.57
VCX3A-203ENST00000612369 AGBL4Q5VU57 503 aa18.6■□□□□ 0.57
VCX3A-203ENST00000612369 SFMBT2Q5VUG0 894 aa18.6■□□□□ 0.57
VCX3A-203ENST00000612369 FAM72DQ6L9T8 149 aa18.6■□□□□ 0.57
VCX3A-203ENST00000612369 NEK5Q6P3R8 708 aa18.6■□□□□ 0.57
VCX3A-203ENST00000612369 TRIM69Q86WT6 500 aa18.6■□□□□ 0.57
VCX3A-203ENST00000612369 FAM72BQ86X60 149 aa18.6■□□□□ 0.57
VCX3A-203ENST00000612369 PLPP6Q8IY26 295 aa18.6■□□□□ 0.57
VCX3A-203ENST00000612369 SLC6A18Q96N87 628 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 462.4 ms