RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 ARP10275 920 aa5.25□□□□□ -1.57
KARSP3-201ENST00000571212 KLRC1P26715 233 aa5.25□□□□□ -1.57
KARSP3-201ENST00000571212 PRPHP41219 470 aa5.25□□□□□ -1.57
KARSP3-201ENST00000571212 TECP42680 631 aa5.25□□□□□ -1.57
KARSP3-201ENST00000571212 ACTR2P61160 394 aa5.25□□□□□ -1.57
KARSP3-201ENST00000571212 NUCB2P80303 420 aa5.25□□□□□ -1.57
KARSP3-201ENST00000571212 ITKQ08881 620 aa5.25□□□□□ -1.57
KARSP3-201ENST00000571212 TARDBPQ13148 414 aaKnown RBP eCLIP5.25□□□□□ -1.57
KARSP3-201ENST00000571212 ITGB3BPQ13352 177 aaPredicted RBP5.25□□□□□ -1.57
KARSP3-201ENST00000571212 TMEM266Q2M3C6 531 aa5.25□□□□□ -1.57
KARSP3-201ENST00000571212 FAM102BQ5T8I3 360 aa5.25□□□□□ -1.57
KARSP3-201ENST00000571212 ARL6IP4Q66PJ3 421 aaKnown RBP5.25□□□□□ -1.57
KARSP3-201ENST00000571212 MTHFD1LQ6UB35 978 aa5.25□□□□□ -1.57
KARSP3-201ENST00000571212 UBALD2Q8IYN6 164 aa5.25□□□□□ -1.57
KARSP3-201ENST00000571212 THNSL1Q8IYQ7 743 aa5.25□□□□□ -1.57
KARSP3-201ENST00000571212 GPATCH11Q8N954 259 aa5.25□□□□□ -1.57
KARSP3-201ENST00000571212 COLGALT1Q8NBJ5 622 aa5.25□□□□□ -1.57
KARSP3-201ENST00000571212 TRAPPC12Q8WVT3 735 aa5.25□□□□□ -1.57
KARSP3-201ENST00000571212 MRPS27Q92552 414 aaKnown RBP5.25□□□□□ -1.57
KARSP3-201ENST00000571212 PGBD1Q96JS3 809 aa5.25□□□□□ -1.57
KARSP3-201ENST00000571212 FAM20AQ96MK3 541 aa5.25□□□□□ -1.57
KARSP3-201ENST00000571212 PNKPQ96T60 521 aa5.25□□□□□ -1.57
KARSP3-201ENST00000571212 RIT2Q99578 217 aa5.25□□□□□ -1.57
KARSP3-201ENST00000571212 SDF4Q9BRK5 362 aa5.25□□□□□ -1.57
KARSP3-201ENST00000571212 CWH43Q9H720 699 aa5.25□□□□□ -1.57
KARSP3-201ENST00000571212 ELAC1Q9H777 363 aaKnown RBP5.25□□□□□ -1.57
KARSP3-201ENST00000571212 MANSC1Q9H8J5 431 aa5.25□□□□□ -1.57
KARSP3-201ENST00000571212 PRDM16Q9HAZ2 1276 aa5.25□□□□□ -1.57
KARSP3-201ENST00000571212 ATP6V0A4Q9HBG4 840 aa5.25□□□□□ -1.57
KARSP3-201ENST00000571212 AGO4Q9HCK5 861 aaKnown RBP5.25□□□□□ -1.57
KARSP3-201ENST00000571212 TYW1Q9NV66 732 aaKnown RBP5.25□□□□□ -1.57
KARSP3-201ENST00000571212 TMEM161AQ9NX61 479 aa5.25□□□□□ -1.57
KARSP3-201ENST00000571212 TUBD1Q9UJT1 453 aa5.25□□□□□ -1.57
KARSP3-201ENST00000571212 RCOR1Q9UKL0 485 aa5.25□□□□□ -1.57
KARSP3-201ENST00000571212 COL1A2P08123 1366 aa5.25□□□□□ -1.57
KARSP3-201ENST00000571212 FAM237AA0A1B0GTK4 181 aa5.24□□□□□ -1.57
KARSP3-201ENST00000571212 CCDC194A0A1B0GVG4 234 aa5.24□□□□□ -1.57
KARSP3-201ENST00000571212 LRRC3CA6NJW4 275 aa5.24□□□□□ -1.57
KARSP3-201ENST00000571212 H3BQV1 296 aa5.24□□□□□ -1.57
KARSP3-201ENST00000571212 MSH4O15457 936 aa5.24□□□□□ -1.57
KARSP3-201ENST00000571212 PPP6R2O75170 966 aa5.24□□□□□ -1.57
KARSP3-201ENST00000571212 TDP2O95551 362 aa5.24□□□□□ -1.57
KARSP3-201ENST00000571212 PPM1AP35813 382 aa5.24□□□□□ -1.57
KARSP3-201ENST00000571212 CRYBB1P53674 252 aaPredicted RBP5.24□□□□□ -1.57
KARSP3-201ENST00000571212 MRPS35P82673 323 aaKnown RBP5.24□□□□□ -1.57
KARSP3-201ENST00000571212 CREMQ03060 361 aa5.24□□□□□ -1.57
KARSP3-201ENST00000571212 HNRNPA0Q13151 305 aaKnown RBP5.24□□□□□ -1.57
KARSP3-201ENST00000571212 PPP2R5CQ13362 524 aa5.24□□□□□ -1.57
KARSP3-201ENST00000571212 PDIA5Q14554 519 aa5.24□□□□□ -1.57
KARSP3-201ENST00000571212 SLC39A14Q15043 492 aa5.24□□□□□ -1.57
KARSP3-201ENST00000571212 IL17AQ16552 155 aa5.24□□□□□ -1.57
KARSP3-201ENST00000571212 ZNF484Q5JVG2 852 aa5.24□□□□□ -1.57
KARSP3-201ENST00000571212 PLPP4Q5VZY2 271 aa5.24□□□□□ -1.57
KARSP3-201ENST00000571212 FAM160B1Q5W0V3 765 aa5.24□□□□□ -1.57
KARSP3-201ENST00000571212 PGM2L1Q6PCE3 622 aa5.24□□□□□ -1.57
KARSP3-201ENST00000571212 KIAA0319LQ8IZA0 1049 aa5.24□□□□□ -1.57
KARSP3-201ENST00000571212 LINC00301Q8NCQ3 95 aa5.24□□□□□ -1.57
KARSP3-201ENST00000571212 ACTRT2Q8TDY3 377 aa5.24□□□□□ -1.57
KARSP3-201ENST00000571212 SLC9A6Q92581 669 aa5.24□□□□□ -1.57
KARSP3-201ENST00000571212 JADE3Q92613 823 aa5.24□□□□□ -1.57
KARSP3-201ENST00000571212 CASP10Q92851 521 aa5.24□□□□□ -1.57
KARSP3-201ENST00000571212 NECTIN4Q96NY8 510 aa5.24□□□□□ -1.57
KARSP3-201ENST00000571212 TMEM117Q9H0C3 514 aa5.24□□□□□ -1.57
KARSP3-201ENST00000571212 C11orf54Q9H0W9 315 aaPredicted RBP5.24□□□□□ -1.57
KARSP3-201ENST00000571212 TMEM60Q9H2L4 133 aa5.24□□□□□ -1.57
KARSP3-201ENST00000571212 TBC1D22BQ9NU19 505 aa5.24□□□□□ -1.57
KARSP3-201ENST00000571212 KCTD5Q9NXV2 234 aa5.24□□□□□ -1.57
KARSP3-201ENST00000571212 LRIT1Q9P2V4 623 aa5.24□□□□□ -1.57
KARSP3-201ENST00000571212 ST3GAL5Q9UNP4 418 aa5.24□□□□□ -1.57
KARSP3-201ENST00000571212 CFAP54Q96N23 3096 aa5.24□□□□□ -1.57
KARSP3-201ENST00000571212 DENND4AQ7Z401 1863 aa5.24□□□□□ -1.57
KARSP3-201ENST00000571212 GVINP1Q7Z2Y8 2422 aa5.24□□□□□ -1.57
KARSP3-201ENST00000571212 K7ESF4 209 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 IPO5O00410 1097 aaKnown RBP5.23□□□□□ -1.57
KARSP3-201ENST00000571212 MARCH6O60337 910 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 CCNT1O60563 726 aaKnown RBP5.23□□□□□ -1.57
KARSP3-201ENST00000571212 C1QL1O75973 258 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 STBD1O95210 358 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 LYPLA2O95372 231 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 YEATS4O95619 227 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 BMP15O95972 392 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 CCNE2O96020 404 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 PDGFBP01127 241 aaPredicted RBP5.23□□□□□ -1.57
KARSP3-201ENST00000571212 MUTP22033 750 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 NBL1P41271 181 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 MTHFRP42898 656 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 CTXN1P60606 82 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 KRT17Q04695 432 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 ITIH3Q06033 890 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 LETM2Q2VYF4 491 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 HYIQ5T013 277 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 CES5AQ6NT32 575 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 ASCL5Q7RTU5 278 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 FAM228AQ86W67 206 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 LNX2Q8N448 690 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 RDM1Q8NG50 284 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 PDLIM2Q96JY6 352 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 ZNF558Q96NG5 402 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 CASD1Q96PB1 797 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 USP28Q96RU2 1077 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms