RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 UNQ6494/PRO21346Q6UXR6 183 aa16.09■□□□□ 0.17
USB1-208ENST00000563207 RAD9BQ6WBX8 426 aa16.09■□□□□ 0.17
USB1-208ENST00000563207 RABEPKQ7Z6M1 372 aa16.09■□□□□ 0.17
USB1-208ENST00000563207 CHCHD4Q8N4Q1 142 aa16.09■□□□□ 0.17
USB1-208ENST00000563207 PNPLA1Q8N8W4 532 aa16.09■□□□□ 0.17
USB1-208ENST00000563207 RFFLQ8WZ73 363 aa16.09■□□□□ 0.17
USB1-208ENST00000563207 TTC17Q96AE7 1141 aa16.09■□□□□ 0.17
USB1-208ENST00000563207 PDLIM2Q96JY6 352 aa16.09■□□□□ 0.17
USB1-208ENST00000563207 RPL10LQ96L21 214 aaKnown RBP16.09■□□□□ 0.17
USB1-208ENST00000563207 SLC32A1Q9H598 525 aa16.09■□□□□ 0.17
USB1-208ENST00000563207 ANAPC7Q9UJX3 599 aa16.09■□□□□ 0.17
USB1-208ENST00000563207 FNDC3AQ9Y2H6 1198 aaKnown RBP16.09■□□□□ 0.17
USB1-208ENST00000563207 A0A0A6YYK5 440 aaPredicted RBP16.08■□□□□ 0.16
USB1-208ENST00000563207 F5H5T6 163 aa16.08■□□□□ 0.16
USB1-208ENST00000563207 PAGE1O75459 146 aa16.08■□□□□ 0.16
USB1-208ENST00000563207 LUC7L3O95232 432 aaKnown RBP16.08■□□□□ 0.16
USB1-208ENST00000563207 ATP5BP06576 529 aaKnown RBP16.08■□□□□ 0.16
USB1-208ENST00000563207 PROS1P07225 676 aa16.08■□□□□ 0.16
USB1-208ENST00000563207 VAV1P15498 845 aa16.08■□□□□ 0.16
USB1-208ENST00000563207 TACR2P21452 398 aa16.08■□□□□ 0.16
USB1-208ENST00000563207 ADRA1BP35368 520 aa16.08■□□□□ 0.16
USB1-208ENST00000563207 GGCXP38435 758 aa16.08■□□□□ 0.16
USB1-208ENST00000563207 STK19P49842 368 aaPredicted RBP16.08■□□□□ 0.16
USB1-208ENST00000563207 METAP1P53582 386 aa16.08■□□□□ 0.16
USB1-208ENST00000563207 OGDHQ02218 1023 aa16.08■□□□□ 0.16
USB1-208ENST00000563207 SCAPQ12770 1279 aa16.08■□□□□ 0.16
USB1-208ENST00000563207 HLA-BQ31612 363 aa16.08■□□□□ 0.16
USB1-208ENST00000563207 TTC39BQ5VTQ0 682 aaPredicted RBP16.08■□□□□ 0.16
USB1-208ENST00000563207 FAM131BQ86XD5 332 aa16.08■□□□□ 0.16
USB1-208ENST00000563207 OR52K2Q8NGK3 314 aa16.08■□□□□ 0.16
USB1-208ENST00000563207 SLC35G2Q8TBE7 412 aa16.08■□□□□ 0.16
USB1-208ENST00000563207 GATA6Q92908 595 aa16.08■□□□□ 0.16
USB1-208ENST00000563207 BIRC7Q96CA5 298 aa16.08■□□□□ 0.16
USB1-208ENST00000563207 ORAI3Q9BRQ5 295 aa16.08■□□□□ 0.16
USB1-208ENST00000563207 OSBPL2Q9H1P3 480 aa16.08■□□□□ 0.16
USB1-208ENST00000563207 GAREM1Q9H706 876 aa16.08■□□□□ 0.16
USB1-208ENST00000563207 SUSD2Q9UGT4 822 aa16.08■□□□□ 0.16
USB1-208ENST00000563207 ERVW-1Q9UQF0 538 aa16.08■□□□□ 0.16
USB1-208ENST00000563207 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.08■□□□□ 0.16
USB1-208ENST00000563207 TP53BP1Q12888 1972 aaPredicted RBP16.07■□□□□ 0.16
USB1-208ENST00000563207 FSBPO95073 299 aa16.07■□□□□ 0.16
USB1-208ENST00000563207 SEMA4FO95754 770 aa16.07■□□□□ 0.16
USB1-208ENST00000563207 C7P10643 843 aa16.07■□□□□ 0.16
USB1-208ENST00000563207 MZF1P28698 734 aaPredicted RBP16.07■□□□□ 0.16
USB1-208ENST00000563207 HADHBP55084 474 aaKnown RBP16.07■□□□□ 0.16
USB1-208ENST00000563207 NRG1Q02297 640 aaPredicted RBP16.07■□□□□ 0.16
USB1-208ENST00000563207 CDH18Q13634 790 aa16.07■□□□□ 0.16
USB1-208ENST00000563207 RABGAP1LQ5R372 815 aa16.07■□□□□ 0.16
USB1-208ENST00000563207 C9orf64Q5T6V5 341 aa16.07■□□□□ 0.16
USB1-208ENST00000563207 SLFN11Q7Z7L1 901 aa16.07■□□□□ 0.16
USB1-208ENST00000563207 CHSY1Q86X52 802 aa16.07■□□□□ 0.16
USB1-208ENST00000563207 PSTKQ8IV42 348 aaKnown RBP16.07■□□□□ 0.16
USB1-208ENST00000563207 IGSF8Q969P0 613 aa16.07■□□□□ 0.16
USB1-208ENST00000563207 PRMT1Q99873 361 aaKnown RBP16.07■□□□□ 0.16
USB1-208ENST00000563207 TRIM7Q9C029 511 aa16.07■□□□□ 0.16
USB1-208ENST00000563207 RSPH9Q9H1X1 276 aaPredicted RBP16.07■□□□□ 0.16
USB1-208ENST00000563207 RETREG1Q9H6L5 497 aa16.07■□□□□ 0.16
USB1-208ENST00000563207 EBF2Q9HAK2 575 aa16.07■□□□□ 0.16
USB1-208ENST00000563207 ZMIZ1Q9ULJ6 1067 aa16.07■□□□□ 0.16
USB1-208ENST00000563207 SNX11Q9Y5W9 270 aa16.07■□□□□ 0.16
USB1-208ENST00000563207 HS3ST4Q9Y661 456 aa16.07■□□□□ 0.16
USB1-208ENST00000563207 DOCK4Q8N1I0 1966 aa16.07■□□□□ 0.16
USB1-208ENST00000563207 DMXL2Q8TDJ6 3036 aa16.07■□□□□ 0.16
USB1-208ENST00000563207 FAM47DPA6NHR8 397 aa16.06■□□□□ 0.16
USB1-208ENST00000563207 BTNL10A8MVZ5 291 aa16.06■□□□□ 0.16
USB1-208ENST00000563207 H0Y626 953 aa16.06■□□□□ 0.16
USB1-208ENST00000563207 MID1O15344 667 aa16.06■□□□□ 0.16
USB1-208ENST00000563207 DNTTP04053 509 aa16.06■□□□□ 0.16
USB1-208ENST00000563207 IGHV4-34P06331 123 aa16.06■□□□□ 0.16
USB1-208ENST00000563207 MAN1A1P33908 653 aa16.06■□□□□ 0.16
USB1-208ENST00000563207 VAV2P52735 878 aa16.06■□□□□ 0.16
USB1-208ENST00000563207 AUHQ13825 339 aaKnown RBP16.06■□□□□ 0.16
USB1-208ENST00000563207 TRIP6Q15654 476 aaKnown RBP16.06■□□□□ 0.16
USB1-208ENST00000563207 KIF19Q2TAC6 998 aa16.06■□□□□ 0.16
USB1-208ENST00000563207 HNRNPA1L2Q32P51 320 aaKnown RBP16.06■□□□□ 0.16
USB1-208ENST00000563207 C5orf22Q49AR2 442 aa16.06■□□□□ 0.16
USB1-208ENST00000563207 SCYL2Q6P3W7 929 aa16.06■□□□□ 0.16
USB1-208ENST00000563207 LRRC31Q6UY01 552 aa16.06■□□□□ 0.16
USB1-208ENST00000563207 C14orf80Q86SX3 495 aa16.06■□□□□ 0.16
USB1-208ENST00000563207 SLCO6A1Q86UG4 719 aa16.06■□□□□ 0.16
USB1-208ENST00000563207 MMAAQ8IVH4 418 aaKnown RBP16.06■□□□□ 0.16
USB1-208ENST00000563207 NAXDQ8IW45 347 aa16.06■□□□□ 0.16
USB1-208ENST00000563207 CCDC117Q8IWD4 279 aaPredicted RBP16.06■□□□□ 0.16
USB1-208ENST00000563207 FAM129BQ96TA1 746 aa16.06■□□□□ 0.16
USB1-208ENST00000563207 TM9SF3Q9HD45 589 aa16.06■□□□□ 0.16
USB1-208ENST00000563207 ANLNQ9NQW6 1124 aa16.06■□□□□ 0.16
USB1-208ENST00000563207 SUN2Q9UH99 717 aa16.06■□□□□ 0.16
USB1-208ENST00000563207 BTBD3Q9Y2F9 522 aa16.06■□□□□ 0.16
USB1-208ENST00000563207 SNX10Q9Y5X0 201 aa16.06■□□□□ 0.16
USB1-208ENST00000563207 FREM2Q5SZK8 3169 aa16.05■□□□□ 0.16
USB1-208ENST00000563207 A0A1W2PP55 124 aa16.05■□□□□ 0.16
USB1-208ENST00000563207 I6L893 689 aaPredicted RBP16.05■□□□□ 0.16
USB1-208ENST00000563207 PLK4O00444 970 aa16.05■□□□□ 0.16
USB1-208ENST00000563207 WNT9AO14904 365 aa16.05■□□□□ 0.16
USB1-208ENST00000563207 PJA2O43164 708 aa16.05■□□□□ 0.16
USB1-208ENST00000563207 PRPSAP2O60256 369 aa16.05■□□□□ 0.16
USB1-208ENST00000563207 CBFA2T3O75081 653 aa16.05■□□□□ 0.16
USB1-208ENST00000563207 LRCH4O75427 683 aa16.05■□□□□ 0.16
USB1-208ENST00000563207 PROSCO94903 275 aa16.05■□□□□ 0.16
USB1-208ENST00000563207 HTR7P34969 479 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms