RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 VPS51Q9UID3 782 aa17.05■□□□□ 0.32
SREBF1-219ENST00000580540 TCRBV5S1A1TA0A578 114 aa17.04■□□□□ 0.32
SREBF1-219ENST00000580540 ILVBLA1L0T0 632 aa17.04■□□□□ 0.32
SREBF1-219ENST00000580540 FAM72CH0Y354 149 aa17.04■□□□□ 0.32
SREBF1-219ENST00000580540 CBX4O00257 560 aa17.04■□□□□ 0.32
SREBF1-219ENST00000580540 CDX4O14627 284 aaPredicted RBP17.04■□□□□ 0.32
SREBF1-219ENST00000580540 ATP9BO43861 1147 aa17.04■□□□□ 0.32
SREBF1-219ENST00000580540 GLDCP23378 1020 aa17.04■□□□□ 0.32
SREBF1-219ENST00000580540 PRKCIP41743 596 aa17.04■□□□□ 0.32
SREBF1-219ENST00000580540 ELAVL3Q14576 367 aaKnown RBP17.04■□□□□ 0.32
SREBF1-219ENST00000580540 POM121L1PQ3SYA9 428 aa17.04■□□□□ 0.32
SREBF1-219ENST00000580540 FIGNQ5HY92 759 aa17.04■□□□□ 0.32
SREBF1-219ENST00000580540 FAM72AQ5TYM5 149 aa17.04■□□□□ 0.32
SREBF1-219ENST00000580540 FAM72DQ6L9T8 149 aa17.04■□□□□ 0.32
SREBF1-219ENST00000580540 USP30Q70CQ3 517 aa17.04■□□□□ 0.32
SREBF1-219ENST00000580540 FAM72BQ86X60 149 aa17.04■□□□□ 0.32
SREBF1-219ENST00000580540 SH2D3CQ8N5H7 860 aa17.04■□□□□ 0.32
SREBF1-219ENST00000580540 DNASE2BQ8WZ79 361 aa17.04■□□□□ 0.32
SREBF1-219ENST00000580540 OR8D1Q8WZ84 308 aa17.04■□□□□ 0.32
SREBF1-219ENST00000580540 VCPIP1Q96JH7 1222 aa17.04■□□□□ 0.32
SREBF1-219ENST00000580540 CNPY3Q9BT09 278 aa17.04■□□□□ 0.32
SREBF1-219ENST00000580540 NEUROG2Q9H2A3 272 aa17.04■□□□□ 0.32
SREBF1-219ENST00000580540 CAPN10Q9HC96 672 aa17.04■□□□□ 0.32
SREBF1-219ENST00000580540 ATP13A1Q9HD20 1204 aa17.04■□□□□ 0.32
SREBF1-219ENST00000580540 PARVAQ9NVD7 372 aa17.04■□□□□ 0.32
SREBF1-219ENST00000580540 PPARGC1AQ9UBK2 798 aaKnown RBP17.04■□□□□ 0.32
SREBF1-219ENST00000580540 SERGEFQ9UGK8 458 aa17.04■□□□□ 0.32
SREBF1-219ENST00000580540 DNAI1Q9UI46 699 aa17.04■□□□□ 0.32
SREBF1-219ENST00000580540 SPTBN2O15020 2390 aa17.04■□□□□ 0.32
SREBF1-219ENST00000580540 A0A1B0GTW7 788 aa17.03■□□□□ 0.32
SREBF1-219ENST00000580540 K7ERQ8 282 aa17.03■□□□□ 0.32
SREBF1-219ENST00000580540 DDX3XO00571 662 aaKnown RBP eCLIP17.03■□□□□ 0.32
SREBF1-219ENST00000580540 ARHGAP33O14559 1287 aa17.03■□□□□ 0.32
SREBF1-219ENST00000580540 BCAT2O15382 392 aaPredicted RBP17.03■□□□□ 0.32
SREBF1-219ENST00000580540 LRIG2O94898 1065 aa17.03■□□□□ 0.32
SREBF1-219ENST00000580540 ADH1BP00325 375 aa17.03■□□□□ 0.32
SREBF1-219ENST00000580540 SYPP08247 313 aa17.03■□□□□ 0.32
SREBF1-219ENST00000580540 SRCP12931 536 aa17.03■□□□□ 0.32
SREBF1-219ENST00000580540 C5AR1P21730 350 aa17.03■□□□□ 0.32
SREBF1-219ENST00000580540 PSMA2P25787 234 aa17.03■□□□□ 0.32
SREBF1-219ENST00000580540 OGDHQ02218 1023 aa17.03■□□□□ 0.32
SREBF1-219ENST00000580540 MAMLD1Q13495 774 aa17.03■□□□□ 0.32
SREBF1-219ENST00000580540 EFHC2Q5JST6 749 aa17.03■□□□□ 0.32
SREBF1-219ENST00000580540 PPP1R15BQ5SWA1 713 aa17.03■□□□□ 0.32
SREBF1-219ENST00000580540 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.03■□□□□ 0.32
SREBF1-219ENST00000580540 TMC6Q7Z403 805 aa17.03■□□□□ 0.32
SREBF1-219ENST00000580540 DSG4Q86SJ6 1040 aa17.03■□□□□ 0.32
SREBF1-219ENST00000580540 PYROXD2Q8N2H3 581 aa17.03■□□□□ 0.32
SREBF1-219ENST00000580540 DCAF4L2Q8NA75 395 aa17.03■□□□□ 0.32
SREBF1-219ENST00000580540 OR2I1PQ8NGU4 316 aa17.03■□□□□ 0.32
SREBF1-219ENST00000580540 NTAN1Q96AB6 310 aa17.03■□□□□ 0.32
SREBF1-219ENST00000580540 TBC1D31Q96DN5 1066 aa17.03■□□□□ 0.32
SREBF1-219ENST00000580540 PCED1AQ9H1Q7 454 aa17.03■□□□□ 0.32
SREBF1-219ENST00000580540 MYO1AQ9UBC5 1043 aa17.03■□□□□ 0.32
SREBF1-219ENST00000580540 FARP1Q9Y4F1 1045 aaPredicted RBP17.03■□□□□ 0.32
SREBF1-219ENST00000580540 ADAMTS9Q9P2N4 1935 aa17.03■□□□□ 0.32
SREBF1-219ENST00000580540 PLK4O00444 970 aa17.02■□□□□ 0.32
SREBF1-219ENST00000580540 TM4SF5O14894 197 aa17.02■□□□□ 0.32
SREBF1-219ENST00000580540 SMAD6O43541 496 aaKnown RBP17.02■□□□□ 0.32
SREBF1-219ENST00000580540 CREB3O43889 395 aa17.02■□□□□ 0.32
SREBF1-219ENST00000580540 RTN2O75298 545 aa17.02■□□□□ 0.32
SREBF1-219ENST00000580540 TPM3P06753 285 aa17.02■□□□□ 0.32
SREBF1-219ENST00000580540 C7P10643 843 aa17.02■□□□□ 0.32
SREBF1-219ENST00000580540 GZMAP12544 262 aa17.02■□□□□ 0.32
SREBF1-219ENST00000580540 RHOQP17081 205 aa17.02■□□□□ 0.32
SREBF1-219ENST00000580540 GOT1P17174 413 aa17.02■□□□□ 0.32
SREBF1-219ENST00000580540 PBX1P40424 430 aa17.02■□□□□ 0.32
SREBF1-219ENST00000580540 VASPP50552 380 aaPredicted RBP17.02■□□□□ 0.32
SREBF1-219ENST00000580540 NRG1Q02297 640 aaPredicted RBP17.02■□□□□ 0.32
SREBF1-219ENST00000580540 GNA12Q03113 381 aa17.02■□□□□ 0.32
SREBF1-219ENST00000580540 ARTNQ5T4W7 220 aa17.02■□□□□ 0.32
SREBF1-219ENST00000580540 RETSATQ6NUM9 610 aa17.02■□□□□ 0.32
SREBF1-219ENST00000580540 NCEH1Q6PIU2 408 aa17.02■□□□□ 0.32
SREBF1-219ENST00000580540 ZNF783Q6ZMS7 281 aa17.02■□□□□ 0.32
SREBF1-219ENST00000580540 ZNF354CQ86Y25 554 aa17.02■□□□□ 0.32
SREBF1-219ENST00000580540 AADATQ8N5Z0 425 aa17.02■□□□□ 0.32
SREBF1-219ENST00000580540 OR14C36Q8NHC7 312 aa17.02■□□□□ 0.32
SREBF1-219ENST00000580540 BIRC7Q96CA5 298 aa17.02■□□□□ 0.32
SREBF1-219ENST00000580540 ZNF653Q96CK0 615 aa17.02■□□□□ 0.32
SREBF1-219ENST00000580540 XPO4Q9C0E2 1151 aaKnown RBP17.02■□□□□ 0.32
SREBF1-219ENST00000580540 TSPY26PQ9H489 355 aa17.02■□□□□ 0.32
SREBF1-219ENST00000580540 ZNF212Q9UDV6 495 aa17.02■□□□□ 0.32
SREBF1-219ENST00000580540 CNOT8Q9UFF9 292 aaKnown RBP17.02■□□□□ 0.32
SREBF1-219ENST00000580540 HS3ST2Q9Y278 367 aa17.02■□□□□ 0.32
SREBF1-219ENST00000580540 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.02■□□□□ 0.32
SREBF1-219ENST00000580540 DNAH14Q0VDD8 3507 aa17.01■□□□□ 0.31
SREBF1-219ENST00000580540 DOCK4Q8N1I0 1966 aa17.01■□□□□ 0.31
SREBF1-219ENST00000580540 A0A1W2PQJ5 194 aa17.01■□□□□ 0.31
SREBF1-219ENST00000580540 LRRC72A6NJI9 287 aa17.01■□□□□ 0.31
SREBF1-219ENST00000580540 C1QTNF3-AMACRE9PGA6 284 aa17.01■□□□□ 0.31
SREBF1-219ENST00000580540 ACVRL1P37023 503 aa17.01■□□□□ 0.31
SREBF1-219ENST00000580540 DNA2P51530 1060 aa17.01■□□□□ 0.31
SREBF1-219ENST00000580540 METAP1P53582 386 aa17.01■□□□□ 0.31
SREBF1-219ENST00000580540 GALCP54803 685 aa17.01■□□□□ 0.31
SREBF1-219ENST00000580540 ZBED6P86452 979 aa17.01■□□□□ 0.31
SREBF1-219ENST00000580540 NFKBIBQ15653 356 aa17.01■□□□□ 0.31
SREBF1-219ENST00000580540 MANEALQ5VSG8 457 aa17.01■□□□□ 0.31
SREBF1-219ENST00000580540 FAM46CQ5VWP2 391 aa17.01■□□□□ 0.31
SREBF1-219ENST00000580540 KIAA0895LQ68EN5 471 aa17.01■□□□□ 0.31
SREBF1-219ENST00000580540 PLEKHA7Q6IQ23 1121 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms