RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 GDF10P55107 478 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 ADARP55265 1226 aaKnown RBP11.5□□□□□ -0.57
SMPD4-218ENST00000482171 HDAC4P56524 1084 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 SLC25A3Q00325 362 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 PLOD1Q02809 727 aaPredicted RBP11.5□□□□□ -0.57
SMPD4-218ENST00000482171 GRB14Q14449 540 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 NOMO1Q15155 1222 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 FAM83EQ2M2I3 478 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 KHDC1Q4VXA5 237 aaKnown RBP11.5□□□□□ -0.57
SMPD4-218ENST00000482171 SGO1Q5FBB7 561 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 TAPT1Q6NXT6 567 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 DCLRE1AQ6PJP8 1040 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 B3GNT9Q6UX72 402 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 FAM228AQ86W67 206 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 LPCAT1Q8NF37 534 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 PHF21BQ96EK2 531 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 FCRL2Q96LA5 508 aaPredicted RBP11.5□□□□□ -0.57
SMPD4-218ENST00000482171 ZNF570Q96NI8 536 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 MAF1Q9H063 256 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 ADNPQ9H2P0 1102 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 CD274Q9NZQ7 290 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 PKP3Q9Y446 797 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.5□□□□□ -0.57
SMPD4-218ENST00000482171 A0A096LPK6 155 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 SMNDC1O75940 238 aaKnown RBP eCLIP11.5□□□□□ -0.57
SMPD4-218ENST00000482171 SERPINF2P08697 491 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 SPATA31D3P0C874 917 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 OR1D2P34982 312 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 SERPINB8P50452 374 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 TBCCQ15814 346 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 RIPOR1Q6ZS17 1223 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 SPATA31D4Q6ZUB0 917 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 MARK2Q7KZI7 788 aaKnown RBP11.5□□□□□ -0.57
SMPD4-218ENST00000482171 CLNKQ7Z7G1 428 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 TRABD2AQ86V40 505 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 GPR88Q9GZN0 384 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 EBF2Q9HAK2 575 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 GPAMQ9HCL2 828 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 AAASQ9NRG9 546 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 ARL8BQ9NVJ2 186 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 CDY1Q9Y6F8 540 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 TCRBV9S1A1TA0A576 114 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 YJEFN3A6XGL0 299 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 MFSD11O43934 449 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 MTA2O94776 668 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 USP1O94782 785 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 MFSD5Q6N075 450 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 MRNIPQ6NTE8 343 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 TTC33Q6PID6 262 aaPredicted RBP11.5□□□□□ -0.57
SMPD4-218ENST00000482171 HS6ST3Q8IZP7 471 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 EFCAB3Q8N7B9 438 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 DBF4BQ8NFT6 615 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 B3GALT6Q96L58 329 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 ZNF317Q96PQ6 595 aaPredicted RBP11.5□□□□□ -0.57
SMPD4-218ENST00000482171 KLHL5Q96PQ7 755 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 C16orf70Q9BSU1 422 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 TMEM109Q9BVC6 243 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 HAPLN2Q9GZV7 340 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 IL1RL2Q9HB29 575 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 NSMCE4AQ9NXX6 385 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 CRLS1Q9UJA2 301 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 ZNF229Q9UJW7 825 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 SNX13Q9Y5W8 968 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 SNX5Q9Y5X3 404 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 GSTA4O15217 222 aa11.49□□□□□ -0.57
SMPD4-218ENST00000482171 CHADO15335 359 aa11.49□□□□□ -0.57
SMPD4-218ENST00000482171 HNRNPRO43390 633 aaKnown RBP11.49□□□□□ -0.57
SMPD4-218ENST00000482171 SRP72O76094 671 aaKnown RBP11.49□□□□□ -0.57
SMPD4-218ENST00000482171 IL10P22301 178 aa11.49□□□□□ -0.57
SMPD4-218ENST00000482171 EDNRBP24530 442 aa11.49□□□□□ -0.57
SMPD4-218ENST00000482171 GJA5P36382 358 aa11.49□□□□□ -0.57
SMPD4-218ENST00000482171 ST8SIA6P61647 398 aa11.49□□□□□ -0.57
SMPD4-218ENST00000482171 KRT33BQ14525 404 aa11.49□□□□□ -0.57
SMPD4-218ENST00000482171 SPRED3Q2MJR0 410 aa11.49□□□□□ -0.57
SMPD4-218ENST00000482171 CDCA2Q69YH5 1023 aaPredicted RBP11.49□□□□□ -0.57
SMPD4-218ENST00000482171 GDF6Q6KF10 455 aaPredicted RBP11.49□□□□□ -0.57
SMPD4-218ENST00000482171 TPGS1Q6ZTW0 290 aa11.49□□□□□ -0.57
SMPD4-218ENST00000482171 SLC26A9Q7LBE3 791 aa11.49□□□□□ -0.57
SMPD4-218ENST00000482171 FNIP1Q8TF40 1166 aa11.49□□□□□ -0.57
SMPD4-218ENST00000482171 CPT1BQ92523 772 aa11.49□□□□□ -0.57
SMPD4-218ENST00000482171 USP13Q92995 863 aaPredicted RBP11.49□□□□□ -0.57
SMPD4-218ENST00000482171 DCUN1D1Q96GG9 259 aa11.49□□□□□ -0.57
SMPD4-218ENST00000482171 TRIM15Q9C019 465 aa11.49□□□□□ -0.57
SMPD4-218ENST00000482171 CIPCQ9C0C6 399 aa11.49□□□□□ -0.57
SMPD4-218ENST00000482171 MTIF3Q9H2K0 278 aaKnown RBP11.49□□□□□ -0.57
SMPD4-218ENST00000482171 ARHGEF3Q9NR81 526 aa11.49□□□□□ -0.57
SMPD4-218ENST00000482171 GRHL1Q9NZI5 618 aa11.49□□□□□ -0.57
SMPD4-218ENST00000482171 ORC6Q9Y5N6 252 aa11.49□□□□□ -0.57
SMPD4-218ENST00000482171 PTCH2Q9Y6C5 1203 aa11.49□□□□□ -0.57
SMPD4-218ENST00000482171 SF3B1O75533 1304 aaKnown RBP eCLIP11.49□□□□□ -0.57
SMPD4-218ENST00000482171 C2orf71A6NGG8 1288 aa11.49□□□□□ -0.57
SMPD4-218ENST00000482171 FKTNO75072 461 aa11.49□□□□□ -0.57
SMPD4-218ENST00000482171 SOAT2O75908 522 aa11.49□□□□□ -0.57
SMPD4-218ENST00000482171 TPBGLP0DKB5 382 aa11.49□□□□□ -0.57
SMPD4-218ENST00000482171 ANPEPP15144 967 aa11.49□□□□□ -0.57
SMPD4-218ENST00000482171 ITGB6P18564 788 aa11.49□□□□□ -0.57
SMPD4-218ENST00000482171 ARHGEF7Q14155 803 aa11.49□□□□□ -0.57
SMPD4-218ENST00000482171 IKBKEQ14164 716 aa11.49□□□□□ -0.57
SMPD4-218ENST00000482171 LBRQ14739 615 aaKnown RBP11.49□□□□□ -0.57
SMPD4-218ENST00000482171 PSMD5Q16401 504 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms