RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 CGRRF1Q99675 332 aa16.64■□□□□ 0.25
PTCH1-201ENST00000331920 C1QTNF7Q9BXJ2 289 aa16.64■□□□□ 0.25
PTCH1-201ENST00000331920 ATXN3LQ9H3M9 355 aa16.64■□□□□ 0.25
PTCH1-201ENST00000331920 ZNF214Q9UL59 606 aaPredicted RBP16.64■□□□□ 0.25
PTCH1-201ENST00000331920 ERGIC3Q9Y282 383 aa16.64■□□□□ 0.25
PTCH1-201ENST00000331920 TRIM17Q9Y577 477 aa16.64■□□□□ 0.25
PTCH1-201ENST00000331920 MROH7Q68CQ1 1323 aa16.64■□□□□ 0.25
PTCH1-201ENST00000331920 BHMG1C9JSJ3 638 aaPredicted RBP16.63■□□□□ 0.25
PTCH1-201ENST00000331920 CSF1RP07333 972 aa16.63■□□□□ 0.25
PTCH1-201ENST00000331920 CHRDL2Q6WN34 429 aa16.63■□□□□ 0.25
PTCH1-201ENST00000331920 JSRP1Q96MG2 331 aaPredicted RBP16.63■□□□□ 0.25
PTCH1-201ENST00000331920 TDRD1Q9BXT4 1180 aaKnown RBP16.63■□□□□ 0.25
PTCH1-201ENST00000331920 INTS7Q9NVH2 962 aaKnown RBP16.63■□□□□ 0.25
PTCH1-201ENST00000331920 NR2F1P10589 423 aa16.63■□□□□ 0.25
PTCH1-201ENST00000331920 UGT1A5P35504 534 aa16.63■□□□□ 0.25
PTCH1-201ENST00000331920 IGFALSP35858 605 aa16.63■□□□□ 0.25
PTCH1-201ENST00000331920 HYIQ5T013 277 aa16.63■□□□□ 0.25
PTCH1-201ENST00000331920 ARMC10Q8N2F6 343 aa16.63■□□□□ 0.25
PTCH1-201ENST00000331920 OR56A4Q8NGH8 313 aa16.63■□□□□ 0.25
PTCH1-201ENST00000331920 PHF10Q8WUB8 498 aaKnown RBP16.63■□□□□ 0.25
PTCH1-201ENST00000331920 HPS1Q92902 700 aa16.63■□□□□ 0.25
PTCH1-201ENST00000331920 TBC1D13Q9NVG8 400 aa16.63■□□□□ 0.25
PTCH1-201ENST00000331920 NKIRAS2Q9NYR9 191 aa16.63■□□□□ 0.25
PTCH1-201ENST00000331920 STARD13Q9Y3M8 1113 aa16.63■□□□□ 0.25
PTCH1-201ENST00000331920 MAFKO60675 156 aa16.63■□□□□ 0.25
PTCH1-201ENST00000331920 CAPN15O75808 1086 aa16.63■□□□□ 0.25
PTCH1-201ENST00000331920 GCNT7Q6ZNI0 430 aa16.63■□□□□ 0.25
PTCH1-201ENST00000331920 SERPINA1P01009 418 aa16.63■□□□□ 0.25
PTCH1-201ENST00000331920 MTTPP55157 894 aa16.63■□□□□ 0.25
PTCH1-201ENST00000331920 CASP9P55211 416 aa16.63■□□□□ 0.25
PTCH1-201ENST00000331920 CORO7P57737 925 aa16.63■□□□□ 0.25
PTCH1-201ENST00000331920 CYP4F8P98187 520 aa16.63■□□□□ 0.25
PTCH1-201ENST00000331920 TPGS1Q6ZTW0 290 aa16.63■□□□□ 0.25
PTCH1-201ENST00000331920 CDRT15Q96T59 188 aa16.63■□□□□ 0.25
PTCH1-201ENST00000331920 MTG1Q9BT17 334 aaPredicted RBP16.63■□□□□ 0.25
PTCH1-201ENST00000331920 ZCCHC2Q9C0B9 1178 aaKnown RBP16.63■□□□□ 0.25
PTCH1-201ENST00000331920 RXFP1Q9HBX9 757 aa16.63■□□□□ 0.25
PTCH1-201ENST00000331920 FAM172BPA6NC97 362 aa16.63■□□□□ 0.25
PTCH1-201ENST00000331920 CDC42P60953 191 aa16.63■□□□□ 0.25
PTCH1-201ENST00000331920 VBP1P61758 197 aa16.63■□□□□ 0.25
PTCH1-201ENST00000331920 CHST4Q8NCG5 386 aa16.63■□□□□ 0.25
PTCH1-201ENST00000331920 GPR156Q8NFN8 814 aa16.63■□□□□ 0.25
PTCH1-201ENST00000331920 AIF1LQ9BQI0 150 aa16.63■□□□□ 0.25
PTCH1-201ENST00000331920 TRIM9Q9C026 710 aa16.63■□□□□ 0.25
PTCH1-201ENST00000331920 JMJD4Q9H9V9 463 aa16.63■□□□□ 0.25
PTCH1-201ENST00000331920 CKLFQ9UBR5 152 aa16.63■□□□□ 0.25
PTCH1-201ENST00000331920 MYMKA6NI61 221 aa16.63■□□□□ 0.25
PTCH1-201ENST00000331920 ZNF677Q86XU0 584 aa16.63■□□□□ 0.25
PTCH1-201ENST00000331920 CLEC10AQ8IUN9 316 aa16.63■□□□□ 0.25
PTCH1-201ENST00000331920 NUDT12Q9BQG2 462 aa16.63■□□□□ 0.25
PTCH1-201ENST00000331920 GGA2Q9UJY4 613 aa16.63■□□□□ 0.25
PTCH1-201ENST00000331920 RAB23Q9ULC3 237 aa16.63■□□□□ 0.25
PTCH1-201ENST00000331920 SLC26A3P40879 764 aa16.62■□□□□ 0.25
PTCH1-201ENST00000331920 MNDAP41218 407 aa16.62■□□□□ 0.25
PTCH1-201ENST00000331920 ZCCHC23Q6ZST2 131 aa16.62■□□□□ 0.25
PTCH1-201ENST00000331920 CCDC36Q8IYA8 594 aa16.62■□□□□ 0.25
PTCH1-201ENST00000331920 FAR1Q8WVX9 515 aa16.62■□□□□ 0.25
PTCH1-201ENST00000331920 ALDH8A1Q9H2A2 487 aaPredicted RBP16.62■□□□□ 0.25
PTCH1-201ENST00000331920 ZFP14Q9HCL3 533 aa16.62■□□□□ 0.25
PTCH1-201ENST00000331920 OPTCQ9UBM4 332 aa16.62■□□□□ 0.25
PTCH1-201ENST00000331920 A0A1W2PQ72 361 aa16.62■□□□□ 0.25
PTCH1-201ENST00000331920 PGRMC2O15173 223 aa16.62■□□□□ 0.25
PTCH1-201ENST00000331920 DCXO43602 365 aa16.62■□□□□ 0.25
PTCH1-201ENST00000331920 PLIN3O60664 434 aa16.62■□□□□ 0.25
PTCH1-201ENST00000331920 NEK3P51956 506 aa16.62■□□□□ 0.25
PTCH1-201ENST00000331920 ARFIP1P53367 373 aa16.62■□□□□ 0.25
PTCH1-201ENST00000331920 SULT1C3Q6IMI6 304 aa16.62■□□□□ 0.25
PTCH1-201ENST00000331920 CCL15-CCL14A0A0B4J2E2 113 aa16.62■□□□□ 0.25
PTCH1-201ENST00000331920 PLOD2O00469 737 aa16.62■□□□□ 0.25
PTCH1-201ENST00000331920 IL12AP29459 219 aa16.62■□□□□ 0.25
PTCH1-201ENST00000331920 CCL15Q16663 113 aa16.62■□□□□ 0.25
PTCH1-201ENST00000331920 TRMT5Q32P41 509 aaKnown RBP16.62■□□□□ 0.25
PTCH1-201ENST00000331920 TEX47Q8TBZ9 253 aa16.62■□□□□ 0.25
PTCH1-201ENST00000331920 TSEN15Q8WW01 171 aaKnown RBP16.62■□□□□ 0.25
PTCH1-201ENST00000331920 GMPPBQ9Y5P6 360 aa16.62■□□□□ 0.25
PTCH1-201ENST00000331920 SLC33A1O00400 549 aaPredicted RBP16.62■□□□□ 0.25
PTCH1-201ENST00000331920 POMCP01189 267 aa16.62■□□□□ 0.25
PTCH1-201ENST00000331920 FAM131AQ6UXB0 335 aa16.62■□□□□ 0.25
PTCH1-201ENST00000331920 DEF8Q6ZN54 512 aa16.62■□□□□ 0.25
PTCH1-201ENST00000331920 OAFQ86UD1 273 aa16.62■□□□□ 0.25
PTCH1-201ENST00000331920 KAT5Q92993 513 aa16.62■□□□□ 0.25
PTCH1-201ENST00000331920 SEMA4BQ9NPR2 832 aaPredicted RBP16.62■□□□□ 0.25
PTCH1-201ENST00000331920 HOXC12P31275 282 aa16.62■□□□□ 0.25
PTCH1-201ENST00000331920 ZNF433Q8N7K0 673 aaPredicted RBP16.62■□□□□ 0.25
PTCH1-201ENST00000331920 FNIP1Q8TF40 1166 aa16.62■□□□□ 0.25
PTCH1-201ENST00000331920 POP1Q99575 1024 aaKnown RBP16.62■□□□□ 0.25
PTCH1-201ENST00000331920 TMEM168Q9H0V1 697 aa16.62■□□□□ 0.25
PTCH1-201ENST00000331920 H0Y858 1186 aa16.62■□□□□ 0.25
PTCH1-201ENST00000331920 ARHGAP36Q6ZRI8 547 aa16.62■□□□□ 0.25
PTCH1-201ENST00000331920 SYTL5Q8TDW5 730 aaPredicted RBP16.62■□□□□ 0.25
PTCH1-201ENST00000331920 AP3S1Q92572 193 aa16.62■□□□□ 0.25
PTCH1-201ENST00000331920 TOR3AQ9H497 397 aa16.62■□□□□ 0.25
PTCH1-201ENST00000331920 KLQ9UEF7 1012 aa16.62■□□□□ 0.25
PTCH1-201ENST00000331920 SSR3Q9UNL2 185 aa16.62■□□□□ 0.25
PTCH1-201ENST00000331920 SLC12A4Q9UP95 1085 aa16.62■□□□□ 0.25
PTCH1-201ENST00000331920 PMF1-BGLAPU3KQ54 211 aa16.62■□□□□ 0.25
PTCH1-201ENST00000331920 GSAPA4D1B5 854 aa16.62■□□□□ 0.25
PTCH1-201ENST00000331920 ERVV-1B6SEH8 477 aa16.62■□□□□ 0.25
PTCH1-201ENST00000331920 OR10H3O60404 316 aa16.62■□□□□ 0.25
PTCH1-201ENST00000331920 KRT36O76013 467 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms