RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 RNASEH2AO75792 299 aaKnown RBP18.09■□□□□ 0.49
SHKBP1-203ENST00000594298 IGLV3-25P01717 112 aa18.09■□□□□ 0.49
SHKBP1-203ENST00000594298 APOEP02649 317 aa18.09■□□□□ 0.49
SHKBP1-203ENST00000594298 CCDC172P0C7W6 258 aa18.09■□□□□ 0.49
SHKBP1-203ENST00000594298 PNMA6AP0CW24 399 aaPredicted RBP18.09■□□□□ 0.49
SHKBP1-203ENST00000594298 C5AR1P21730 350 aa18.09■□□□□ 0.49
SHKBP1-203ENST00000594298 SLC8A1P32418 973 aa18.09■□□□□ 0.49
SHKBP1-203ENST00000594298 SOX5P35711 763 aa18.09■□□□□ 0.49
SHKBP1-203ENST00000594298 CTSOP43234 321 aaPredicted RBP18.09■□□□□ 0.49
SHKBP1-203ENST00000594298 IL9RQ01113 521 aa18.09■□□□□ 0.49
SHKBP1-203ENST00000594298 PDCLQ13371 301 aa18.09■□□□□ 0.49
SHKBP1-203ENST00000594298 NUMA1Q14980 2115 aa18.09■□□□□ 0.49
SHKBP1-203ENST00000594298 SYPL2Q5VXT5 272 aa18.09■□□□□ 0.49
SHKBP1-203ENST00000594298 LUZP1Q86V48 1076 aa18.09■□□□□ 0.49
SHKBP1-203ENST00000594298 PDCD7Q8N8D1 485 aaKnown RBP18.09■□□□□ 0.49
SHKBP1-203ENST00000594298 TMEM35BQ8NCS4 154 aa18.09■□□□□ 0.49
SHKBP1-203ENST00000594298 ADAM32Q8TC27 787 aa18.09■□□□□ 0.49
SHKBP1-203ENST00000594298 PPP1R13BQ96KQ4 1090 aa18.09■□□□□ 0.49
SHKBP1-203ENST00000594298 BTN2A3PQ96KV6 586 aa18.09■□□□□ 0.49
SHKBP1-203ENST00000594298 OMDQ99983 421 aa18.09■□□□□ 0.49
SHKBP1-203ENST00000594298 SYNCQ9H7C4 482 aa18.09■□□□□ 0.49
SHKBP1-203ENST00000594298 TJP2Q9UDY2 1190 aa18.09■□□□□ 0.49
SHKBP1-203ENST00000594298 FTSJ1Q9UET6 329 aa18.09■□□□□ 0.49
SHKBP1-203ENST00000594298 XPO7Q9UIA9 1087 aaKnown RBP18.09■□□□□ 0.49
SHKBP1-203ENST00000594298 PTPRBP23467 1997 aa18.08■□□□□ 0.49
SHKBP1-203ENST00000594298 A0A1B0GTH6 734 aa18.08■□□□□ 0.48
SHKBP1-203ENST00000594298 A0A1W2PQC6 194 aa18.08■□□□□ 0.48
SHKBP1-203ENST00000594298 A0A1W2PR77 199 aa18.08■□□□□ 0.48
SHKBP1-203ENST00000594298 CAPN9O14815 690 aa18.08■□□□□ 0.48
SHKBP1-203ENST00000594298 YKT6O15498 198 aa18.08■□□□□ 0.48
SHKBP1-203ENST00000594298 GFPT2O94808 682 aa18.08■□□□□ 0.48
SHKBP1-203ENST00000594298 MOCS2O96007 188 aaPredicted RBP18.08■□□□□ 0.48
SHKBP1-203ENST00000594298 ADH1BP00325 375 aa18.08■□□□□ 0.48
SHKBP1-203ENST00000594298 WNT1P04628 370 aa18.08■□□□□ 0.48
SHKBP1-203ENST00000594298 GOT1P17174 413 aa18.08■□□□□ 0.48
SHKBP1-203ENST00000594298 TACR2P21452 398 aa18.08■□□□□ 0.48
SHKBP1-203ENST00000594298 JAM2P57087 298 aa18.08■□□□□ 0.48
SHKBP1-203ENST00000594298 EIF4EBP2Q13542 120 aaPredicted RBP18.08■□□□□ 0.48
SHKBP1-203ENST00000594298 SLC12A1Q13621 1099 aa18.08■□□□□ 0.48
SHKBP1-203ENST00000594298 SND1Q7KZF4 910 aaKnown RBP eCLIP18.08■□□□□ 0.48
SHKBP1-203ENST00000594298 TMPRSS12Q86WS5 348 aa18.08■□□□□ 0.48
SHKBP1-203ENST00000594298 MARCH9Q86YJ5 346 aa18.08■□□□□ 0.48
SHKBP1-203ENST00000594298 PASD1Q8IV76 773 aa18.08■□□□□ 0.48
SHKBP1-203ENST00000594298 APCDD1Q8J025 514 aa18.08■□□□□ 0.48
SHKBP1-203ENST00000594298 LGI2Q8N0V4 545 aa18.08■□□□□ 0.48
SHKBP1-203ENST00000594298 WDTC1Q8N5D0 677 aa18.08■□□□□ 0.48
SHKBP1-203ENST00000594298 AADATQ8N5Z0 425 aa18.08■□□□□ 0.48
SHKBP1-203ENST00000594298 MSANTD4Q8NCY6 345 aa18.08■□□□□ 0.48
SHKBP1-203ENST00000594298 PTPRN2Q92932 1015 aa18.08■□□□□ 0.48
SHKBP1-203ENST00000594298 POPDC2Q9HBU9 364 aa18.08■□□□□ 0.48
SHKBP1-203ENST00000594298 SLCO3A1Q9UIG8 710 aa18.08■□□□□ 0.48
SHKBP1-203ENST00000594298 ATRXP46100 2492 aa18.08■□□□□ 0.48
SHKBP1-203ENST00000594298 E5RJQ4 531 aa18.07■□□□□ 0.48
SHKBP1-203ENST00000594298 TEX33O43247 280 aa18.07■□□□□ 0.48
SHKBP1-203ENST00000594298 LSM8O95777 96 aaKnown RBP18.07■□□□□ 0.48
SHKBP1-203ENST00000594298 CDK4P11802 303 aa18.07■□□□□ 0.48
SHKBP1-203ENST00000594298 CD38P28907 300 aa18.07■□□□□ 0.48
SHKBP1-203ENST00000594298 ADPRHP54922 357 aa18.07■□□□□ 0.48
SHKBP1-203ENST00000594298 CYP4F3Q08477 520 aa18.07■□□□□ 0.48
SHKBP1-203ENST00000594298 ELAVL3Q14576 367 aaKnown RBP18.07■□□□□ 0.48
SHKBP1-203ENST00000594298 SHBQ15464 509 aa18.07■□□□□ 0.48
SHKBP1-203ENST00000594298 ZC3H12AQ5D1E8 599 aaKnown RBP18.07■□□□□ 0.48
SHKBP1-203ENST00000594298 EFHC1Q5JVL4 640 aa18.07■□□□□ 0.48
SHKBP1-203ENST00000594298 RNF219Q5W0B1 726 aaPredicted RBP18.07■□□□□ 0.48
SHKBP1-203ENST00000594298 RAP1GAP2Q684P5 730 aa18.07■□□□□ 0.48
SHKBP1-203ENST00000594298 DHRS13Q6UX07 377 aa18.07■□□□□ 0.48
SHKBP1-203ENST00000594298 CHSY1Q86X52 802 aa18.07■□□□□ 0.48
SHKBP1-203ENST00000594298 ZDHHC17Q8IUH5 632 aa18.07■□□□□ 0.48
SHKBP1-203ENST00000594298 C1orf131Q8NDD1 294 aaKnown RBP18.07■□□□□ 0.48
SHKBP1-203ENST00000594298 SAP25Q8TEE9 199 aa18.07■□□□□ 0.48
SHKBP1-203ENST00000594298 HNRNPLLQ8WVV9 542 aaKnown RBP18.07■□□□□ 0.48
SHKBP1-203ENST00000594298 FAM131CQ96AQ9 280 aa18.07■□□□□ 0.48
SHKBP1-203ENST00000594298 TSPY26PQ9H489 355 aa18.07■□□□□ 0.48
SHKBP1-203ENST00000594298 AASDHPPTQ9NRN7 309 aa18.07■□□□□ 0.48
SHKBP1-203ENST00000594298 CYTH4Q9UIA0 394 aa18.07■□□□□ 0.48
SHKBP1-203ENST00000594298 ADAMTS20P59510 1910 aa18.07■□□□□ 0.48
SHKBP1-203ENST00000594298 DSPP15924 2871 aaKnown RBP18.07■□□□□ 0.48
SHKBP1-203ENST00000594298 LAMA5O15230 3695 aa18.06■□□□□ 0.48
SHKBP1-203ENST00000594298 A0A087WV48 116 aa18.06■□□□□ 0.48
SHKBP1-203ENST00000594298 FAM149AA5PLN7 773 aa18.06■□□□□ 0.48
SHKBP1-203ENST00000594298 EPHB6O15197 1021 aa18.06■□□□□ 0.48
SHKBP1-203ENST00000594298 LATO43561 262 aa18.06■□□□□ 0.48
SHKBP1-203ENST00000594298 TRUB2O95900 331 aaKnown RBP18.06■□□□□ 0.48
SHKBP1-203ENST00000594298 GLI1P08151 1106 aa18.06■□□□□ 0.48
SHKBP1-203ENST00000594298 MZF1P28698 734 aaPredicted RBP18.06■□□□□ 0.48
SHKBP1-203ENST00000594298 CDH5P33151 784 aaPredicted RBP18.06■□□□□ 0.48
SHKBP1-203ENST00000594298 PSMD8P48556 350 aa18.06■□□□□ 0.48
SHKBP1-203ENST00000594298 VASPP50552 380 aaPredicted RBP18.06■□□□□ 0.48
SHKBP1-203ENST00000594298 PLK1P53350 603 aa18.06■□□□□ 0.48
SHKBP1-203ENST00000594298 YWHAZP63104 245 aaKnown RBP18.06■□□□□ 0.48
SHKBP1-203ENST00000594298 FANCCQ00597 558 aa18.06■□□□□ 0.48
SHKBP1-203ENST00000594298 NR1I3Q14994 352 aa18.06■□□□□ 0.48
SHKBP1-203ENST00000594298 SOWAHCQ53LP3 525 aaPredicted RBP18.06■□□□□ 0.48
SHKBP1-203ENST00000594298 TTC39BQ5VTQ0 682 aaPredicted RBP18.06■□□□□ 0.48
SHKBP1-203ENST00000594298 TAF3Q5VWG9 929 aa18.06■□□□□ 0.48
SHKBP1-203ENST00000594298 GATAD2AQ86YP4 633 aa18.06■□□□□ 0.48
SHKBP1-203ENST00000594298 STK40Q8N2I9 435 aa18.06■□□□□ 0.48
SHKBP1-203ENST00000594298 RPL10LQ96L21 214 aaKnown RBP18.06■□□□□ 0.48
SHKBP1-203ENST00000594298 PRMT1Q99873 361 aaKnown RBP18.06■□□□□ 0.48
SHKBP1-203ENST00000594298 GDF3Q9NR23 364 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms