RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 FAM8A1Q9UBU6 413 aa7.71□□□□□ -1.18
HDAC3-216ENST00000523088 MAD2L2Q9UI95 211 aa7.71□□□□□ -1.18
HDAC3-216ENST00000523088 GPR34Q9UPC5 381 aa7.71□□□□□ -1.18
HDAC3-216ENST00000523088 ERVK-11Q9UQG0 969 aa7.71□□□□□ -1.18
HDAC3-216ENST00000523088 NOD1Q9Y239 953 aa7.71□□□□□ -1.18
HDAC3-216ENST00000523088 PLAAQ9Y263 795 aa7.71□□□□□ -1.18
HDAC3-216ENST00000523088 GPR52Q9Y2T5 361 aa7.71□□□□□ -1.18
HDAC3-216ENST00000523088 PCDHA1Q9Y5I3 950 aa7.71□□□□□ -1.18
HDAC3-216ENST00000523088 SMIM31A0A1B0GVY4 71 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 SH3PXD2BA1X283 911 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 BECN2A8MW95 431 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 F8W8V4 182 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 K7EPI3 171 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 LAD1O00515 517 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 KRT86O43790 486 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 SEC22BO75396 215 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 KCNH1O95259 989 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 BMP10O95393 424 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 CFBP00751 764 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 FGBP02675 491 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 CPB1P15086 417 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 CHN1P15882 459 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 ITGB8P26012 769 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 CCND2P30279 289 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 GRK6P43250 576 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 NPTX2P47972 431 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 AP1S2P56377 157 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 RAB4BP61018 213 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 TROAPQ12815 778 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 SLC14A1Q13336 389 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 TAF12Q16514 161 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 MEA1Q16626 185 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 GSTA3Q16772 222 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 PHKG1Q16816 387 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 ATP13A4Q4VNC1 1196 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 HERC4Q5GLZ8 1057 aaPredicted RBP7.7□□□□□ -1.18
HDAC3-216ENST00000523088 RPS26P11Q5JNZ5 115 aaPredicted RBP7.7□□□□□ -1.18
HDAC3-216ENST00000523088 SAPCD1Q5SSQ6 148 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 RASIP1Q5U651 963 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 NAA35Q5VZE5 725 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 KRT40Q6A162 431 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 ZNF425Q6IV72 752 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 PRMT9Q6P2P2 845 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 CYB5R4Q7L1T6 521 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 NLRC3Q7RTR2 1065 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 GPR141Q7Z602 305 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 CCDC25Q86WR0 208 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 MIB1Q86YT6 1006 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 CSGALNACT2Q8N6G5 542 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 ZNF454Q8N9F8 522 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 SRFBP1Q8NEF9 429 aaKnown RBP7.7□□□□□ -1.18
HDAC3-216ENST00000523088 MOSPD2Q8NHP6 518 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 PPTC7Q8NI37 304 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 CLP1Q92989 425 aaKnown RBP7.7□□□□□ -1.18
HDAC3-216ENST00000523088 TNFRSF25Q93038 417 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 ATP2A3Q93084 1043 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 TRIM63Q969Q1 353 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 PTERQ96BW5 349 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 IQCDQ96DY2 449 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 AIFM3Q96NN9 605 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 NT5C1BQ96P26 610 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 FAM111AQ96PZ2 611 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 TMEM237Q96Q45 408 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 SH3GL2Q99962 352 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 SYT15Q9BQS2 421 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 NOC4LQ9BVI4 516 aaKnown RBP7.7□□□□□ -1.18
HDAC3-216ENST00000523088 NUP85Q9BW27 656 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 TXLNGYQ9BZA5 131 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 PRKD2Q9BZL6 878 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 CUEDC2Q9H467 287 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 ALG2Q9H553 416 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 SPACA1Q9HBV2 294 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 LZTFL1Q9NQ48 299 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 KBTBD4Q9NVX7 518 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 MSRAQ9UJ68 235 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 NUP50Q9UKX7 468 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 NOVA2Q9UNW9 492 aaKnown RBP7.7□□□□□ -1.18
HDAC3-216ENST00000523088 PCDHGA3Q9Y5H0 932 aa7.7□□□□□ -1.18
HDAC3-216ENST00000523088 RBM8AQ9Y5S9 174 aaKnown RBP7.7□□□□□ -1.18
HDAC3-216ENST00000523088 MAGEA13PA6NCF6 341 aa7.69□□□□□ -1.18
HDAC3-216ENST00000523088 SOBPA7XYQ1 873 aa7.69□□□□□ -1.18
HDAC3-216ENST00000523088 NPC1O15118 1278 aa7.69□□□□□ -1.18
HDAC3-216ENST00000523088 PRPSAP2O60256 369 aa7.69□□□□□ -1.18
HDAC3-216ENST00000523088 EFCAB14O75071 495 aa7.69□□□□□ -1.18
HDAC3-216ENST00000523088 CBR3O75828 277 aa7.69□□□□□ -1.18
HDAC3-216ENST00000523088 PIGNO95427 931 aa7.69□□□□□ -1.18
HDAC3-216ENST00000523088 MMP3P08254 477 aa7.69□□□□□ -1.18
HDAC3-216ENST00000523088 PRPS2P11908 318 aa7.69□□□□□ -1.18
HDAC3-216ENST00000523088 ZNF12P17014 697 aa7.69□□□□□ -1.18
HDAC3-216ENST00000523088 HLA-DPA1P20036 260 aa7.69□□□□□ -1.18
HDAC3-216ENST00000523088 CCNA2P20248 432 aa7.69□□□□□ -1.18
HDAC3-216ENST00000523088 KCNA5P22460 613 aa7.69□□□□□ -1.18
HDAC3-216ENST00000523088 OR1G1P47890 313 aa7.69□□□□□ -1.18
HDAC3-216ENST00000523088 CCT3P49368 545 aaKnown RBP7.69□□□□□ -1.18
HDAC3-216ENST00000523088 ZNF135P52742 658 aaPredicted RBP7.69□□□□□ -1.18
HDAC3-216ENST00000523088 AIF1P55008 147 aa7.69□□□□□ -1.18
HDAC3-216ENST00000523088 RACK1P63244 317 aaKnown RBP7.69□□□□□ -1.18
HDAC3-216ENST00000523088 HTD2P86397 168 aa7.69□□□□□ -1.18
HDAC3-216ENST00000523088 RHAGQ02094 409 aa7.69□□□□□ -1.18
HDAC3-216ENST00000523088 COASYQ13057 564 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms