RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 LNP1A1A4G5 178 aa11.51□□□□□ -0.57
RFFL-204ENST00000414419 DRGXA6NNA5 263 aa11.51□□□□□ -0.57
RFFL-204ENST00000414419 IGLV3-19P01714 112 aa11.51□□□□□ -0.57
RFFL-204ENST00000414419 ADRA1BP35368 520 aa11.51□□□□□ -0.57
RFFL-204ENST00000414419 IRAK1P51617 712 aa11.51□□□□□ -0.57
RFFL-204ENST00000414419 ARID5BQ14865 1188 aa11.51□□□□□ -0.57
RFFL-204ENST00000414419 FIGNQ5HY92 759 aa11.51□□□□□ -0.57
RFFL-204ENST00000414419 C9orf64Q5T6V5 341 aa11.51□□□□□ -0.57
RFFL-204ENST00000414419 SH3PXD2AQ5TCZ1 1133 aa11.51□□□□□ -0.57
RFFL-204ENST00000414419 DCAF12L1Q5VU92 463 aa11.51□□□□□ -0.57
RFFL-204ENST00000414419 SCYL2Q6P3W7 929 aa11.51□□□□□ -0.57
RFFL-204ENST00000414419 SLC23A3Q6PIS1 610 aa11.51□□□□□ -0.57
RFFL-204ENST00000414419 WDR59Q6PJI9 974 aa11.51□□□□□ -0.57
RFFL-204ENST00000414419 TFAP2DQ7Z6R9 452 aa11.51□□□□□ -0.57
RFFL-204ENST00000414419 MMAAQ8IVH4 418 aaKnown RBP11.51□□□□□ -0.57
RFFL-204ENST00000414419 MCOLN2Q8IZK6 566 aa11.51□□□□□ -0.57
RFFL-204ENST00000414419 SNX19Q92543 992 aa11.51□□□□□ -0.57
RFFL-204ENST00000414419 IQCDQ96DY2 449 aa11.51□□□□□ -0.57
RFFL-204ENST00000414419 VCPIP1Q96JH7 1222 aa11.51□□□□□ -0.57
RFFL-204ENST00000414419 MCEEQ96PE7 176 aa11.51□□□□□ -0.57
RFFL-204ENST00000414419 OMDQ99983 421 aa11.51□□□□□ -0.57
RFFL-204ENST00000414419 ZYG11BQ9C0D3 744 aa11.51□□□□□ -0.57
RFFL-204ENST00000414419 MIR1-1HGQ9H1L0 117 aa11.51□□□□□ -0.57
RFFL-204ENST00000414419 PCED1AQ9H1Q7 454 aa11.51□□□□□ -0.57
RFFL-204ENST00000414419 TMEM9BQ9NQ34 198 aa11.51□□□□□ -0.57
RFFL-204ENST00000414419 FBXL12Q9NXK8 326 aa11.51□□□□□ -0.57
RFFL-204ENST00000414419 OR12D3Q9UGF7 316 aa11.51□□□□□ -0.57
RFFL-204ENST00000414419 SLC6A14Q9UN76 642 aa11.51□□□□□ -0.57
RFFL-204ENST00000414419 FARP1Q9Y4F1 1045 aaPredicted RBP11.51□□□□□ -0.57
RFFL-204ENST00000414419 CNOT1A5YKK6 2376 aaKnown RBP11.51□□□□□ -0.57
RFFL-204ENST00000414419 LAMA1P25391 3075 aa11.51□□□□□ -0.57
RFFL-204ENST00000414419 CACNA1EQ15878 2313 aa11.51□□□□□ -0.57
RFFL-204ENST00000414419 DCHS1Q96JQ0 3298 aa11.5□□□□□ -0.57
RFFL-204ENST00000414419 ASCC3Q8N3C0 2202 aaKnown RBP11.5□□□□□ -0.57
RFFL-204ENST00000414419 C4orf47A7E2U8 309 aa11.5□□□□□ -0.57
RFFL-204ENST00000414419 METTL12A8MUP2 240 aa11.5□□□□□ -0.57
RFFL-204ENST00000414419 I6L893 689 aaPredicted RBP11.5□□□□□ -0.57
RFFL-204ENST00000414419 SEMA4FO95754 770 aa11.5□□□□□ -0.57
RFFL-204ENST00000414419 SYPP08247 313 aa11.5□□□□□ -0.57
RFFL-204ENST00000414419 SERPINF2P08697 491 aa11.5□□□□□ -0.57
RFFL-204ENST00000414419 KCNA4P22459 653 aa11.5□□□□□ -0.57
RFFL-204ENST00000414419 RRM1P23921 792 aa11.5□□□□□ -0.57
RFFL-204ENST00000414419 MAOBP27338 520 aa11.5□□□□□ -0.57
RFFL-204ENST00000414419 SLC8A1P32418 973 aa11.5□□□□□ -0.57
RFFL-204ENST00000414419 ACSL1P33121 698 aa11.5□□□□□ -0.57
RFFL-204ENST00000414419 ZNF143P52747 638 aaPredicted RBP11.5□□□□□ -0.57
RFFL-204ENST00000414419 ELAVL3Q14576 367 aaKnown RBP11.5□□□□□ -0.57
RFFL-204ENST00000414419 DLG2Q15700 870 aa11.5□□□□□ -0.57
RFFL-204ENST00000414419 CST6Q15828 149 aa11.5□□□□□ -0.57
RFFL-204ENST00000414419 TDRD12Q587J7 1177 aaKnown RBP11.5□□□□□ -0.57
RFFL-204ENST00000414419 PEAR1Q5VY43 1037 aaPredicted RBP11.5□□□□□ -0.57
RFFL-204ENST00000414419 RWDD4Q6NW29 188 aaKnown RBP11.5□□□□□ -0.57
RFFL-204ENST00000414419 ZNF783Q6ZMS7 281 aa11.5□□□□□ -0.57
RFFL-204ENST00000414419 USP30Q70CQ3 517 aa11.5□□□□□ -0.57
RFFL-204ENST00000414419 SLFN11Q7Z7L1 901 aa11.5□□□□□ -0.57
RFFL-204ENST00000414419 DSG4Q86SJ6 1040 aa11.5□□□□□ -0.57
RFFL-204ENST00000414419 VPS36Q86VN1 386 aa11.5□□□□□ -0.57
RFFL-204ENST00000414419 ZNF683Q8IZ20 524 aa11.5□□□□□ -0.57
RFFL-204ENST00000414419 STK40Q8N2I9 435 aa11.5□□□□□ -0.57
RFFL-204ENST00000414419 ATP11CQ8NB49 1132 aa11.5□□□□□ -0.57
RFFL-204ENST00000414419 OR52K2Q8NGK3 314 aa11.5□□□□□ -0.57
RFFL-204ENST00000414419 CPLX3Q8WVH0 158 aa11.5□□□□□ -0.57
RFFL-204ENST00000414419 OR8D1Q8WZ84 308 aa11.5□□□□□ -0.57
RFFL-204ENST00000414419 CENPIQ92674 756 aaPredicted RBP11.5□□□□□ -0.57
RFFL-204ENST00000414419 PTPRN2Q92932 1015 aa11.5□□□□□ -0.57
RFFL-204ENST00000414419 ALG14Q96F25 216 aa11.5□□□□□ -0.57
RFFL-204ENST00000414419 CCDC114Q96M63 670 aa11.5□□□□□ -0.57
RFFL-204ENST00000414419 SPON2Q9BUD6 331 aa11.5□□□□□ -0.57
RFFL-204ENST00000414419 GTPBP2Q9BX10 602 aaKnown RBP11.5□□□□□ -0.57
RFFL-204ENST00000414419 OSBPL2Q9H1P3 480 aa11.5□□□□□ -0.57
RFFL-204ENST00000414419 PABPC3Q9H361 631 aaKnown RBP11.5□□□□□ -0.57
RFFL-204ENST00000414419 SGK2Q9HBY8 427 aa11.5□□□□□ -0.57
RFFL-204ENST00000414419 PARVAQ9NVD7 372 aa11.5□□□□□ -0.57
RFFL-204ENST00000414419 IFNKQ9P0W0 207 aa11.5□□□□□ -0.57
RFFL-204ENST00000414419 PPARGC1AQ9UBK2 798 aaKnown RBP11.5□□□□□ -0.57
RFFL-204ENST00000414419 SPTBN2O15020 2390 aa11.49□□□□□ -0.57
RFFL-204ENST00000414419 A0A1W2PQJ5 194 aa11.49□□□□□ -0.57
RFFL-204ENST00000414419 ILVBLA1L0T0 632 aa11.49□□□□□ -0.57
RFFL-204ENST00000414419 FAM47DPA6NHR8 397 aa11.49□□□□□ -0.57
RFFL-204ENST00000414419 MID1O15344 667 aa11.49□□□□□ -0.57
RFFL-204ENST00000414419 CCP110O43303 1012 aa11.49□□□□□ -0.57
RFFL-204ENST00000414419 BNIP3LO60238 219 aa11.49□□□□□ -0.57
RFFL-204ENST00000414419 RNASEH2AO75792 299 aaKnown RBP11.49□□□□□ -0.57
RFFL-204ENST00000414419 ADH1BP00325 375 aa11.49□□□□□ -0.57
RFFL-204ENST00000414419 IL1BP01584 269 aa11.49□□□□□ -0.57
RFFL-204ENST00000414419 FTLP02792 175 aaPredicted RBP11.49□□□□□ -0.57
RFFL-204ENST00000414419 PLEKP08567 350 aaPredicted RBP11.49□□□□□ -0.57
RFFL-204ENST00000414419 GZMAP12544 262 aa11.49□□□□□ -0.57
RFFL-204ENST00000414419 SKILP12757 684 aa11.49□□□□□ -0.57
RFFL-204ENST00000414419 ENGP17813 658 aa11.49□□□□□ -0.57
RFFL-204ENST00000414419 C5AR1P21730 350 aa11.49□□□□□ -0.57
RFFL-204ENST00000414419 ETFBP38117 255 aa11.49□□□□□ -0.57
RFFL-204ENST00000414419 PRKCIP41743 596 aa11.49□□□□□ -0.57
RFFL-204ENST00000414419 MAPK8P45983 427 aa11.49□□□□□ -0.57
RFFL-204ENST00000414419 PSMD8P48556 350 aa11.49□□□□□ -0.57
RFFL-204ENST00000414419 VASPP50552 380 aaPredicted RBP11.49□□□□□ -0.57
RFFL-204ENST00000414419 HDAC4P56524 1084 aa11.49□□□□□ -0.57
RFFL-204ENST00000414419 RPL7AP62424 266 aaKnown RBP11.49□□□□□ -0.57
RFFL-204ENST00000414419 UAP1L1Q3KQV9 507 aa11.49□□□□□ -0.57
RFFL-204ENST00000414419 RAB6CQ53S08 254 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms