RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 PLEKHM1Q9Y4G2 1056 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 PCDHGA5Q9Y5G8 931 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 PCDHGA1Q9Y5H4 931 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 HS3ST3A1Q9Y663 406 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 ATP8B3O60423 1300 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 ADGRF5Q8IZF2 1346 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 OR6C76A6NM76 312 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 BTBD18B2RXH4 712 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 ADCY6O43306 1168 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 SLC25A17O43808 307 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 HNRNPCL1O60812 293 aaKnown RBP5.19□□□□□ -1.58
GABPB1-204ENST00000396464 CUTAO60888 179 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 RTN2O75298 545 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 SEC14L2O76054 403 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 RECQL5O94762 991 aaPredicted RBP5.19□□□□□ -1.58
GABPB1-204ENST00000396464 TRIM16O95361 564 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 SLPIP03973 132 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 GJB1P08034 283 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 ABCB1P08183 1280 aaPredicted RBP5.19□□□□□ -1.58
GABPB1-204ENST00000396464 LTA4HP09960 611 aaKnown RBP5.19□□□□□ -1.58
GABPB1-204ENST00000396464 WEE2P0C1S8 567 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 SBK3P0C264 359 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 GAAP10253 952 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 TOP1P11387 765 aaKnown RBP5.19□□□□□ -1.58
GABPB1-204ENST00000396464 CDH2P19022 906 aaPredicted RBP5.19□□□□□ -1.58
GABPB1-204ENST00000396464 PTGS1P23219 599 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 GUCY1A2P33402 732 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 MSX2P35548 267 aaPredicted RBP5.19□□□□□ -1.58
GABPB1-204ENST00000396464 ACVRL1P37023 503 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 CASP3P42574 277 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 SLC15A1P46059 708 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 PTDSS1P48651 473 aaKnown RBP5.19□□□□□ -1.58
GABPB1-204ENST00000396464 LIG4P49917 911 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 CDK7P50613 346 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 CDH15P55291 814 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 CCNA1P78396 465 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 KCNJ10P78508 379 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 GBE1Q04446 702 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 CD69Q07108 199 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 SNTB1Q13884 538 aaKnown RBP5.19□□□□□ -1.58
GABPB1-204ENST00000396464 TUBB2AQ13885 445 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 CLCA4Q14CN2 919 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 NPY5RQ15761 445 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 HFEQ30201 348 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 SLC39A12Q504Y0 691 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 BOLA3Q53S33 107 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 HSP90AA5PQ58FG0 334 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 CBWD5Q5RIA9 395 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 ZCCHC12Q6PEW1 402 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 LINC00696Q6ZRV3 163 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 MED25Q71SY5 747 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 BMP8AQ7Z5Y6 402 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 ADCK1Q86TW2 530 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 TMEM200AQ86VY9 491 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 CNTN4Q8IWV2 1026 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 SIX6OS1Q8N1H7 587 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 SFRP1Q8N474 314 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 FBXO18Q8NFZ0 1043 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 OR7D4Q8NG98 312 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 SNX33Q8WV41 574 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 CORO2AQ92828 525 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 SAAL1Q96ER3 474 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 DGAT2Q96PD7 388 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 TUBB2BQ9BVA1 445 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 TRIM7Q9C029 511 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 SLC25A32Q9H2D1 315 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 NCOR1P1Q9H4R4 102 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 SH2D4AQ9H788 454 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 BCO1Q9HAY6 547 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 MBNL1Q9NR56 388 aaKnown RBP5.19□□□□□ -1.58
GABPB1-204ENST00000396464 DLL4Q9NR61 685 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 SH3BP4Q9P0V3 963 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 TRPS1Q9UHF7 1281 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 TUBE1Q9UJT0 475 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 APPL1Q9UKG1 709 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 PADI1Q9ULC6 663 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 HPSEQ9Y251 543 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 RUVBL1Q9Y265 456 aaKnown RBP5.19□□□□□ -1.58
GABPB1-204ENST00000396464 ADAM18Q9Y3Q7 739 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 COL15A1P39059 1388 aa5.19□□□□□ -1.58
GABPB1-204ENST00000396464 TRBC2A0A5B9 178 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 CTAGE9A4FU28 777 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 ZSCAN5CA6NGD5 496 aaPredicted RBP5.18□□□□□ -1.58
GABPB1-204ENST00000396464 GAGE10A6NGK3 116 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 CCDC169A6NNP5 214 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 PATE3B3GLJ2 98 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 GCOM1H8Y6P7 765 aaPredicted RBP5.18□□□□□ -1.58
GABPB1-204ENST00000396464 OVOL3O00110 214 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 SGK1O00141 431 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 PRPF4O43172 522 aaKnown RBP eCLIP5.18□□□□□ -1.584e-7■■□□□ 12.4
GABPB1-204ENST00000396464 SEPT4O43236 478 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 CCP110O43303 1012 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 VEGFDO43915 354 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 LY86O95711 162 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 GNAI2P04899 355 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 FAHP16930 419 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 TMEM11P17152 192 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 PTPN3P26045 913 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 HOXD10P28358 340 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 TTKP33981 857 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms