RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 TAF1BQ53T94 588 aaPredicted RBP9.24□□□□□ -0.93
TDP1-202ENST00000393452 GRTP1Q5TC63 336 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 AFMIDQ63HM1 303 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 NAPEPLDQ6IQ20 393 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 RWDD4Q6NW29 188 aaKnown RBP9.24□□□□□ -0.93
TDP1-202ENST00000393452 MSANTD2Q6P1R3 559 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 MTDHQ86UE4 582 aaKnown RBP9.24□□□□□ -0.93
TDP1-202ENST00000393452 MON1AQ86VX9 555 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 RASSF3Q86WH2 238 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 NUDCD3Q8IVD9 361 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 DCP1BQ8IZD4 617 aaKnown RBP9.24□□□□□ -0.93
TDP1-202ENST00000393452 DNAAF3Q8N9W5 541 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 URGCPQ8TCY9 931 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 SKA1Q96BD8 255 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 TBC1D31Q96DN5 1066 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 ZNF419Q96HQ0 510 aaPredicted RBP9.24□□□□□ -0.93
TDP1-202ENST00000393452 FCRL2Q96LA5 508 aaPredicted RBP9.24□□□□□ -0.93
TDP1-202ENST00000393452 C8orf48Q96LL4 319 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 IL12RB2Q99665 862 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 MCMBPQ9BTE3 642 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 CFHR5Q9BXR6 569 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 SIK2Q9H0K1 926 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 CATSPERBQ9H7T0 1116 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 OSER1Q9NX31 292 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 IL37Q9NZH6 218 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 ZFP69BQ9UJL9 534 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 SOX13Q9UN79 622 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 GREB1Q4ZG55 1949 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 A0A1W2PQH9 124 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 KIF3CO14782 793 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 SYN3O14994 580 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 CHUKO15111 745 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 PRKCGP05129 697 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 COL6A1P12109 1028 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 TARSP26639 723 aaKnown RBP9.23□□□□□ -0.93
TDP1-202ENST00000393452 TMPRSS15P98073 1019 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 CDH17Q12864 832 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 CERCAMQ5T4B2 595 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 TEDDM1Q5T9Z0 273 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 LHX8Q68G74 356 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 ARHGAP36Q6ZRI8 547 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 LINC00523Q86TU6 105 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 PXYLP1Q8TE99 480 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 ATP2A3Q93084 1043 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 UTP4Q969X6 686 aaKnown RBP9.23□□□□□ -0.93
TDP1-202ENST00000393452 ZNF669Q96BR6 464 aaPredicted RBP9.23□□□□□ -0.93
TDP1-202ENST00000393452 SLC39A13Q96H72 371 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 C1orf74Q96LT6 269 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 PGLYRP2Q96PD5 576 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 FCRL5Q96RD9 977 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 RBBP8Q99708 897 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 TMEM120AQ9BXJ8 343 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 FTHL17Q9BXU8 183 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 ABI2Q9NYB9 513 aaPredicted RBP9.23□□□□□ -0.93
TDP1-202ENST00000393452 KCNK4Q9NYG8 393 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 IL1RAPL1Q9NZN1 696 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 FNIP2Q9P278 1114 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 DNAJB4Q9UDY4 337 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 DCDC2Q9UHG0 476 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 LNPEPQ9UIQ6 1025 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 ADAM28Q9UKQ2 775 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 A0A1W2PQ45 241 aaPredicted RBP9.23□□□□□ -0.93
TDP1-202ENST00000393452 A0A1W2PQY0 241 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 FAM92AA1XBS5 289 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 WASH4PA8MWX3 477 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 PLIN3O60664 434 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 HNRNPCL1O60812 293 aaKnown RBP9.23□□□□□ -0.93
TDP1-202ENST00000393452 MYL2P10916 166 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 HOXD10P28358 340 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 MAGEA11P43364 429 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 LIMK2P53671 638 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 MLLT6P55198 1093 aaPredicted RBP9.23□□□□□ -0.93
TDP1-202ENST00000393452 MRPL58Q14197 206 aaKnown RBP9.23□□□□□ -0.93
TDP1-202ENST00000393452 PRPSAP1Q14558 356 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 HSF5Q4G112 596 aaPredicted RBP9.23□□□□□ -0.93
TDP1-202ENST00000393452 FAM91A1Q658Y4 838 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 OTOP3Q7RTS5 596 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 LRRC49Q8IUZ0 686 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 SCN4BQ8IWT1 228 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 NUP93Q8N1F7 819 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 ATPAF2Q8N5M1 289 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 MFSD3Q96ES6 412 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 SERPINB11Q96P15 392 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 KIFC1Q9BW19 673 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 SLC39A8Q9C0K1 460 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 FBXO44Q9H4M3 255 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 NOD2Q9HC29 1040 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 TMEM161AQ9NX61 479 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 TXNDC16Q9P2K2 825 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 HEY2Q9UBP5 337 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 HAO1Q9UJM8 370 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 TLR6Q9Y2C9 796 aa9.23□□□□□ -0.93
TDP1-202ENST00000393452 AAR2Q9Y312 384 aaKnown RBP9.23□□□□□ -0.93
TDP1-202ENST00000393452 DFFAO00273 331 aa9.22□□□□□ -0.93
TDP1-202ENST00000393452 MATN3O15232 486 aa9.22□□□□□ -0.93
TDP1-202ENST00000393452 ATP9BO43861 1147 aa9.22□□□□□ -0.93
TDP1-202ENST00000393452 AOC2O75106 756 aa9.22□□□□□ -0.93
TDP1-202ENST00000393452 CBX6O95503 412 aa9.22□□□□□ -0.93
TDP1-202ENST00000393452 PROCP04070 461 aa9.22□□□□□ -0.93
TDP1-202ENST00000393452 SERPINB3P29508 390 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms