RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 RGSL1A5PLK6 1076 aa14.97□□□□□ -0.01
CCDC50-201ENST00000392455 SHQ1Q6PI26 577 aaKnown RBP14.97□□□□□ -0.01
CCDC50-201ENST00000392455 OR6Y1Q8NGX8 325 aa14.97□□□□□ -0.01
CCDC50-201ENST00000392455 ATL1Q8WXF7 558 aa14.97□□□□□ -0.01
CCDC50-201ENST00000392455 TEFMQ96QE5 360 aaKnown RBP14.97□□□□□ -0.01
CCDC50-201ENST00000392455 AMHR2Q16671 573 aa14.97□□□□□ -0.01
CCDC50-201ENST00000392455 STRA8Q7Z7C7 330 aa14.97□□□□□ -0.01
CCDC50-201ENST00000392455 C15orf40Q8WUR7 153 aa14.97□□□□□ -0.01
CCDC50-201ENST00000392455 HPDLQ96IR7 371 aa14.97□□□□□ -0.01
CCDC50-201ENST00000392455 TPD52L3Q96J77 140 aa14.97□□□□□ -0.01
CCDC50-201ENST00000392455 ZNF521Q96K83 1311 aa14.97□□□□□ -0.01
CCDC50-201ENST00000392455 NDUFB10O96000 172 aa14.97□□□□□ -0.01
CCDC50-201ENST00000392455 CYP2A6P11509 494 aaPredicted RBP14.97□□□□□ -0.01
CCDC50-201ENST00000392455 MNDAP41218 407 aa14.97□□□□□ -0.01
CCDC50-201ENST00000392455 GRTP1Q5TC63 336 aa14.97□□□□□ -0.01
CCDC50-201ENST00000392455 MROH9Q5TGP6 573 aa14.97□□□□□ -0.01
CCDC50-201ENST00000392455 GPAT2Q6NUI2 795 aa14.97□□□□□ -0.01
CCDC50-201ENST00000392455 ERICH5Q6P6B1 374 aa14.97□□□□□ -0.01
CCDC50-201ENST00000392455 TUBA3EQ6PEY2 450 aa14.97□□□□□ -0.01
CCDC50-201ENST00000392455 CLEC10AQ8IUN9 316 aa14.97□□□□□ -0.01
CCDC50-201ENST00000392455 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.97□□□□□ -0.01
CCDC50-201ENST00000392455 CROTQ9UKG9 612 aa14.97□□□□□ -0.01
CCDC50-201ENST00000392455 SLC9A8Q9Y2E8 581 aa14.97□□□□□ -0.01
CCDC50-201ENST00000392455 A0A087WZ62 844 aa14.97□□□□□ -0.01
CCDC50-201ENST00000392455 GP5P40197 560 aa14.97□□□□□ -0.01
CCDC50-201ENST00000392455 SPIDRQ14159 915 aa14.97□□□□□ -0.01
CCDC50-201ENST00000392455 STARD3Q14849 445 aa14.97□□□□□ -0.01
CCDC50-201ENST00000392455 USP41Q3LFD5 358 aa14.97□□□□□ -0.01
CCDC50-201ENST00000392455 RFTN2Q52LD8 501 aaPredicted RBP14.97□□□□□ -0.01
CCDC50-201ENST00000392455 LRRC69Q6ZNQ3 347 aa14.97□□□□□ -0.01
CCDC50-201ENST00000392455 QSOX2Q6ZRP7 698 aa14.97□□□□□ -0.01
CCDC50-201ENST00000392455 SGF29Q96ES7 293 aa14.97□□□□□ -0.01
CCDC50-201ENST00000392455 PNKPQ96T60 521 aa14.97□□□□□ -0.01
CCDC50-201ENST00000392455 SLC12A4Q9UP95 1085 aa14.97□□□□□ -0.01
CCDC50-201ENST00000392455 H3BUI4 141 aa14.97□□□□□ -0.01
CCDC50-201ENST00000392455 AVPR1AP37288 418 aa14.97□□□□□ -0.01
CCDC50-201ENST00000392455 MTM1Q13496 603 aa14.97□□□□□ -0.01
CCDC50-201ENST00000392455 JAMLQ86YT9 394 aa14.97□□□□□ -0.01
CCDC50-201ENST00000392455 TMA7Q9Y2S6 64 aaKnown RBP14.97□□□□□ -0.01
CCDC50-201ENST00000392455 NUAK1O60285 661 aa14.97□□□□□ -0.01
CCDC50-201ENST00000392455 TPST1O60507 370 aa14.97□□□□□ -0.01
CCDC50-201ENST00000392455 IQCF2Q8IXL9 164 aa14.97□□□□□ -0.01
CCDC50-201ENST00000392455 MRPS31Q92665 395 aaKnown RBP14.97□□□□□ -0.01
CCDC50-201ENST00000392455 JMJD4Q9H9V9 463 aa14.97□□□□□ -0.01
CCDC50-201ENST00000392455 ZCCHC17Q9NP64 241 aaKnown RBP14.97□□□□□ -0.01
CCDC50-201ENST00000392455 AGPAT5Q9NUQ2 364 aa14.97□□□□□ -0.01
CCDC50-201ENST00000392455 PHF20L1A8MW92 1017 aa14.97□□□□□ -0.01
CCDC50-201ENST00000392455 TIPRLO75663 272 aa14.97□□□□□ -0.01
CCDC50-201ENST00000392455 HSD3B1P14060 373 aa14.97□□□□□ -0.01
CCDC50-201ENST00000392455 SCTRP47872 440 aa14.97□□□□□ -0.01
CCDC50-201ENST00000392455 IZUMO2Q6UXV1 221 aa14.97□□□□□ -0.01
CCDC50-201ENST00000392455 R3HCC1LQ7Z5L2 792 aaKnown RBP14.97□□□□□ -0.01
CCDC50-201ENST00000392455 A1CFQ9NQ94 594 aaKnown RBP14.97□□□□□ -0.01
CCDC50-201ENST00000392455 ETAA1Q9NY74 926 aa14.97□□□□□ -0.01
CCDC50-201ENST00000392455 GRIP1Q9Y3R0 1128 aa14.97□□□□□ -0.01
CCDC50-201ENST00000392455 ABCC3O15438 1527 aa14.97□□□□□ -0.01
CCDC50-201ENST00000392455 RSL1D1O76021 490 aaKnown RBP14.96□□□□□ -0.01
CCDC50-201ENST00000392455 HLA-DRAP01903 254 aa14.96□□□□□ -0.01
CCDC50-201ENST00000392455 TMBIM6P55061 237 aa14.96□□□□□ -0.01
CCDC50-201ENST00000392455 PRAMEF18Q5VWM3 479 aa14.96□□□□□ -0.01
CCDC50-201ENST00000392455 TCEAL6Q6IPX3 200 aa14.96□□□□□ -0.01
CCDC50-201ENST00000392455 RUSC1Q9BVN2 902 aa14.96□□□□□ -0.01
CCDC50-201ENST00000392455 ELL3Q9HB65 397 aaPredicted RBP14.96□□□□□ -0.01
CCDC50-201ENST00000392455 DAGLAQ9Y4D2 1042 aa14.96□□□□□ -0.01
CCDC50-201ENST00000392455 ALKQ9UM73 1620 aa14.96□□□□□ -0.01
CCDC50-201ENST00000392455 A0A087X1B8 175 aa14.96□□□□□ -0.01
CCDC50-201ENST00000392455 INPP4BO15327 924 aa14.96□□□□□ -0.01
CCDC50-201ENST00000392455 SEC24AO95486 1093 aa14.96□□□□□ -0.01
CCDC50-201ENST00000392455 PTGISQ16647 500 aa14.96□□□□□ -0.01
CCDC50-201ENST00000392455 PDPK2PQ6A1A2 396 aa14.96□□□□□ -0.01
CCDC50-201ENST00000392455 CCNI2Q6ZMN8 369 aaPredicted RBP14.96□□□□□ -0.01
CCDC50-201ENST00000392455 SLC25A23Q9BV35 468 aa14.96□□□□□ -0.01
CCDC50-201ENST00000392455 GPRC5DQ9NZD1 345 aa14.96□□□□□ -0.01
CCDC50-201ENST00000392455 CLTCQ00610 1675 aaKnown RBP14.96□□□□□ -0.01
CCDC50-201ENST00000392455 STAU1O95793 577 aaKnown RBP14.96□□□□□ -0.01
CCDC50-201ENST00000392455 OR56A5P0C7T3 313 aa14.96□□□□□ -0.01
CCDC50-201ENST00000392455 CDH3P22223 829 aa14.96□□□□□ -0.01
CCDC50-201ENST00000392455 KLK7P49862 253 aa14.96□□□□□ -0.01
CCDC50-201ENST00000392455 ABATP80404 500 aa14.96□□□□□ -0.01
CCDC50-201ENST00000392455 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.96□□□□□ -0.01
CCDC50-201ENST00000392455 NEK7Q8TDX7 302 aa14.96□□□□□ -0.01
CCDC50-201ENST00000392455 SENP6Q9GZR1 1112 aaPredicted RBP14.96□□□□□ -0.01
CCDC50-201ENST00000392455 PRR12Q9ULL5 1215 aa14.96□□□□□ -0.01
CCDC50-201ENST00000392455 PLIN3O60664 434 aa14.96□□□□□ -0.01
CCDC50-201ENST00000392455 NEK3P51956 506 aa14.96□□□□□ -0.01
CCDC50-201ENST00000392455 SLC34A1Q06495 639 aa14.96□□□□□ -0.01
CCDC50-201ENST00000392455 RIPK1Q13546 671 aa14.96□□□□□ -0.01
CCDC50-201ENST00000392455 METTL3Q86U44 580 aaKnown RBP14.96□□□□□ -0.01
CCDC50-201ENST00000392455 ATCAYQ86WG3 371 aa14.96□□□□□ -0.01
CCDC50-201ENST00000392455 CBWD2Q8IUF1 395 aa14.96□□□□□ -0.01
CCDC50-201ENST00000392455 NIF3L1Q9GZT8 377 aa14.96□□□□□ -0.01
CCDC50-201ENST00000392455 NEUROD4Q9HD90 331 aa14.96□□□□□ -0.01
CCDC50-201ENST00000392455 ANGPT4Q9Y264 503 aa14.96□□□□□ -0.01
CCDC50-201ENST00000392455 LRRC7Q96NW7 1537 aa14.96□□□□□ -0.01
CCDC50-201ENST00000392455 ZC3H11AO75152 810 aaKnown RBP eCLIP14.96□□□□□ -0.01
CCDC50-201ENST00000392455 ITGA8P53708 1063 aa14.96□□□□□ -0.01
CCDC50-201ENST00000392455 SGCGQ13326 291 aa14.96□□□□□ -0.01
CCDC50-201ENST00000392455 SLC45A4Q5BKX6 768 aa14.96□□□□□ -0.01
CCDC50-201ENST00000392455 OLFML1Q6UWY5 402 aa14.96□□□□□ -0.01
CCDC50-201ENST00000392455 SLC4A11Q8NBS3 891 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms