RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 PCDH9Q9HC56 1237 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 CDYLQ9Y232 598 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 INPP4BO15327 924 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 RBP1P09455 135 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 KCNA5P22460 613 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 CNTN1Q12860 1018 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 CUL3Q13618 768 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 GLMNQ92990 594 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 FEM1CQ96JP0 617 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 SAMD11Q96NU1 681 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 NEUROG2Q9H2A3 272 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 NR2E1Q9Y466 385 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 WDR27A2RRH5 827 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 STBD1O95210 358 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 CATP04040 527 aaKnown RBP9.88□□□□□ -0.83
GABPA-201ENST00000354828 UGT2B4P06133 528 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 HSP90AA5PQ58FG0 334 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 TRIM68Q6AZZ1 485 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 LCLAT1Q6UWP7 414 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 KCNMB4Q86W47 210 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 SIAH1Q8IUQ4 282 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 LEMD2Q8NC56 503 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 TUBGCP3Q96CW5 907 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 DPEP3Q9H4B8 488 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 TAS2R14Q9NYV8 317 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 AHSPQ9NZD4 102 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 DNPEPQ9ULA0 475 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 YIPF1Q9Y548 306 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 EVPLLA8MZ36 301 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 GOLGA8TH3BQL2 631 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 INPPL1O15357 1258 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 CFIP05156 583 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 EIF2S1P05198 315 aaKnown RBP9.88□□□□□ -0.83
GABPA-201ENST00000354828 PYGBP11216 843 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 ATP4AP20648 1035 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 TACR2P21452 398 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 ATP6V1E1P36543 226 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 LPIN1Q14693 890 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 GALNTL6Q49A17 601 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 IFNEQ86WN2 208 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 SLC44A2Q8IWA5 706 aaPredicted RBP9.88□□□□□ -0.83
GABPA-201ENST00000354828 OR2W6PQ8NHA6 318 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 SH3RF2Q8TEC5 729 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 TIFAQ96CG3 184 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 CCDC126Q96EE4 140 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 ISCUQ9H1K1 167 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 RNF39Q9H2S5 420 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 NKX2-4Q9H2Z4 354 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.88□□□□□ -0.83
GABPA-201ENST00000354828 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.88□□□□□ -0.83
GABPA-201ENST00000354828 CHUKO15111 745 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 RAD51BO15315 384 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 ACSL4O60488 711 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 PIRTP0C851 137 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 PYGMP11217 842 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 GJA1P17302 382 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 ALDH9A1P49189 494 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 SLC11A1P49279 550 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 NOMO3P69849 1222 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 SLC25A52Q3SY17 297 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 STK40Q8N2I9 435 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 ACOX2Q99424 681 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 TMPRSS4Q9NRS4 437 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 NDE1Q9NXR1 346 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 CACNG4Q9UBN1 327 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 PCDHA3Q9Y5H8 950 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 PDE4DIPQ5VU43 2346 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 CLUHO75153 1309 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 SKAP2O75563 359 aaPredicted RBP9.88□□□□□ -0.83
GABPA-201ENST00000354828 SLC25A14O95258 325 aaPredicted RBP9.88□□□□□ -0.83
GABPA-201ENST00000354828 FKBP9O95302 570 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 PRNPP04156 253 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 SOX11P35716 441 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 DHPSP49366 369 aaPredicted RBP9.88□□□□□ -0.83
GABPA-201ENST00000354828 GATMP50440 423 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 CCNG1P51959 295 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 KCNK10P57789 538 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 SLC29A2Q14542 456 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 RBM43Q6ZSC3 357 aaKnown RBP9.88□□□□□ -0.83
GABPA-201ENST00000354828 FKBP9P1Q75LS8 142 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 PRUNE1Q86TP1 453 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 SEMA4DQ92854 862 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 ABHD8Q96I13 439 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 ZNF333Q96JL9 665 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 KLHL5Q96PQ7 755 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 MCOLN1Q9GZU1 580 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 PRDM12Q9H4Q4 367 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 C10orf88Q9H8K7 445 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 CATSPERZQ9NTU4 200 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 CRYL1Q9Y2S2 319 aa9.88□□□□□ -0.83
GABPA-201ENST00000354828 GLRA3O75311 464 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 GNSP15586 552 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 TM4SF4P48230 202 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 PRIM2P49643 509 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 ITGA9Q13797 1035 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 GRM3Q14832 879 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 PARP6Q2NL67 630 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 NPNTQ6UXI9 565 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 TMCO5AQ8N6Q1 288 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 C10orf53Q8N6V4 93 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms