RNA–Protein interactions for RNA: ENST00000520880.1

CTHRC1-204, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 4 BASIC

Gene CTHRC1, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-204ENST00000520880 CENPIQ92674 756 aaPredicted RBP4.72□□□□□ -1.65
CTHRC1-204ENST00000520880 KAT2AQ92830 837 aa4.72□□□□□ -1.65
CTHRC1-204ENST00000520880 MEIS3Q99687 375 aa4.72□□□□□ -1.65
CTHRC1-204ENST00000520880 FBXO28Q9NVF7 368 aa4.72□□□□□ -1.65
CTHRC1-204ENST00000520880 RGL1Q9NZL6 768 aa4.72□□□□□ -1.65
CTHRC1-204ENST00000520880 SELENONQ9NZV5 590 aa4.72□□□□□ -1.65
CTHRC1-204ENST00000520880 INSL5Q9Y5Q6 135 aa4.72□□□□□ -1.65
CTHRC1-204ENST00000520880 MROH2AA6NES4 1674 aa4.72□□□□□ -1.65
CTHRC1-204ENST00000520880 KIF1BO60333 1816 aa4.72□□□□□ -1.65
CTHRC1-204ENST00000520880 KIF13AQ9H1H9 1805 aa4.72□□□□□ -1.65
CTHRC1-204ENST00000520880 EFCAB6Q5THR3 1501 aa4.72□□□□□ -1.65
CTHRC1-204ENST00000520880 CD109Q6YHK3 1445 aa4.72□□□□□ -1.65
CTHRC1-204ENST00000520880 SPATA31E1Q6ZUB1 1445 aa4.72□□□□□ -1.65
CTHRC1-204ENST00000520880 SPAG9O60271 1321 aaKnown RBP4.72□□□□□ -1.65
CTHRC1-204ENST00000520880 TSPOAP1O95153 1857 aa4.71□□□□□ -1.66
CTHRC1-204ENST00000520880 DIP2CQ9Y2E4 1556 aa4.71□□□□□ -1.66
CTHRC1-204ENST00000520880 A2MP01023 1474 aa4.71□□□□□ -1.66
CTHRC1-204ENST00000520880 NEO1Q92859 1461 aa4.71□□□□□ -1.66
CTHRC1-204ENST00000520880 GXYLT2A0PJZ3 443 aa4.71□□□□□ -1.66
CTHRC1-204ENST00000520880 J3KTA2 159 aa4.71□□□□□ -1.66
CTHRC1-204ENST00000520880 IFNA2P01563 188 aa4.71□□□□□ -1.66
CTHRC1-204ENST00000520880 HSPA5P11021 654 aaKnown RBP4.71□□□□□ -1.66
CTHRC1-204ENST00000520880 NSUN2Q08J23 767 aaKnown RBP eCLIP4.71□□□□□ -1.66
CTHRC1-204ENST00000520880 CBFBQ13951 182 aa4.71□□□□□ -1.66
CTHRC1-204ENST00000520880 HMBOX1Q6NT76 420 aa4.71□□□□□ -1.66
CTHRC1-204ENST00000520880 GPSM1Q86YR5 675 aa4.71□□□□□ -1.66
CTHRC1-204ENST00000520880 SPATA2LQ8IUW3 424 aaPredicted RBP4.71□□□□□ -1.66
CTHRC1-204ENST00000520880 PAQR4Q8N4S7 273 aaPredicted RBP4.71□□□□□ -1.66
CTHRC1-204ENST00000520880 AFAP1Q8N556 730 aa4.71□□□□□ -1.66
CTHRC1-204ENST00000520880 IQCF1Q8N6M8 205 aa4.71□□□□□ -1.66
CTHRC1-204ENST00000520880 ATP2A3Q93084 1043 aa4.71□□□□□ -1.66
CTHRC1-204ENST00000520880 CLMNQ96JQ2 1002 aa4.71□□□□□ -1.66
CTHRC1-204ENST00000520880 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.71□□□□□ -1.66
CTHRC1-204ENST00000520880 KCNK9Q9NPC2 374 aa4.71□□□□□ -1.66
CTHRC1-204ENST00000520880 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.71□□□□□ -1.66
CTHRC1-204ENST00000520880 SLC8A2Q9UPR5 921 aa4.71□□□□□ -1.66
CTHRC1-204ENST00000520880 ICKQ9UPZ9 632 aa4.71□□□□□ -1.66
CTHRC1-204ENST00000520880 UBE2J1Q9Y385 318 aaPredicted RBP4.71□□□□□ -1.66
CTHRC1-204ENST00000520880 CKAP5Q14008 2032 aa4.71□□□□□ -1.66
CTHRC1-204ENST00000520880 MADDQ8WXG6 1647 aa4.71□□□□□ -1.66
CTHRC1-204ENST00000520880 LMTK2Q8IWU2 1503 aa4.71□□□□□ -1.66
CTHRC1-204ENST00000520880 CCDC144AA2RUR9 1427 aa4.71□□□□□ -1.66
CTHRC1-204ENST00000520880 NEURL4Q96JN8 1562 aa4.7□□□□□ -1.66
CTHRC1-204ENST00000520880 MLH3Q9UHC1 1453 aa4.7□□□□□ -1.66
CTHRC1-204ENST00000520880 RPS10-NUDT3A0A1W2PQS6 291 aa4.7□□□□□ -1.66
CTHRC1-204ENST00000520880 FAM234BA2RU67 622 aa4.7□□□□□ -1.66
CTHRC1-204ENST00000520880 MDM4O15151 490 aa4.7□□□□□ -1.66
CTHRC1-204ENST00000520880 TAF5LO75529 589 aa4.7□□□□□ -1.66
CTHRC1-204ENST00000520880 ITGA5P08648 1049 aa4.7□□□□□ -1.66
CTHRC1-204ENST00000520880 TGM2P21980 687 aa4.7□□□□□ -1.66
CTHRC1-204ENST00000520880 RFX2P48378 723 aa4.7□□□□□ -1.66
CTHRC1-204ENST00000520880 LTBQ06643 244 aa4.7□□□□□ -1.66
CTHRC1-204ENST00000520880 DDX10Q13206 875 aaKnown RBP4.7□□□□□ -1.66
CTHRC1-204ENST00000520880 MAPKAPK3Q16644 382 aa4.7□□□□□ -1.66
CTHRC1-204ENST00000520880 Q6ZTC4 211 aa4.7□□□□□ -1.66
CTHRC1-204ENST00000520880 EXD3Q8N9H8 876 aa4.7□□□□□ -1.66
CTHRC1-204ENST00000520880 SLC22A17Q8WUG5 538 aa4.7□□□□□ -1.66
CTHRC1-204ENST00000520880 FAM84BQ96KN1 310 aaPredicted RBP4.7□□□□□ -1.66
CTHRC1-204ENST00000520880 TBCBQ99426 244 aa4.7□□□□□ -1.66
CTHRC1-204ENST00000520880 PAAF1Q9BRP4 392 aa4.7□□□□□ -1.66
CTHRC1-204ENST00000520880 SF3B5Q9BWJ5 86 aaKnown RBP4.7□□□□□ -1.66
CTHRC1-204ENST00000520880 MAP6D1Q9H9H5 199 aa4.7□□□□□ -1.66
CTHRC1-204ENST00000520880 IL21RQ9HBE5 538 aa4.7□□□□□ -1.66
CTHRC1-204ENST00000520880 SIRT3Q9NTG7 399 aaPredicted RBP4.7□□□□□ -1.66
CTHRC1-204ENST00000520880 FAM50BQ9Y247 325 aa4.7□□□□□ -1.66
CTHRC1-204ENST00000520880 PCDHB7Q9Y5E2 793 aa4.7□□□□□ -1.66
CTHRC1-204ENST00000520880 CAMSAP1Q5T5Y3 1602 aa4.7□□□□□ -1.66
CTHRC1-204ENST00000520880 IQGAP1P46940 1657 aa4.7□□□□□ -1.66
CTHRC1-204ENST00000520880 ZC3H13Q5T200 1668 aaKnown RBP4.7□□□□□ -1.66
CTHRC1-204ENST00000520880 SIGLEC1Q9BZZ2 1709 aa4.69□□□□□ -1.66
CTHRC1-204ENST00000520880 DHX29Q7Z478 1369 aaKnown RBP4.69□□□□□ -1.66
CTHRC1-204ENST00000520880 ZMYM4Q5VZL5 1548 aa4.69□□□□□ -1.66
CTHRC1-204ENST00000520880 FOXO6A8MYZ6 492 aa4.69□□□□□ -1.66
CTHRC1-204ENST00000520880 NFATC1O95644 943 aa4.69□□□□□ -1.66
CTHRC1-204ENST00000520880 HARSP12081 509 aaKnown RBP4.69□□□□□ -1.66
CTHRC1-204ENST00000520880 MLH1P40692 756 aa4.69□□□□□ -1.66
CTHRC1-204ENST00000520880 SHC2P98077 582 aa4.69□□□□□ -1.66
CTHRC1-204ENST00000520880 PMS2P11Q13670 270 aa4.69□□□□□ -1.66
CTHRC1-204ENST00000520880 ARL13BQ3SXY8 428 aa4.69□□□□□ -1.66
CTHRC1-204ENST00000520880 HIBCHQ6NVY1 386 aaPredicted RBP4.69□□□□□ -1.66
CTHRC1-204ENST00000520880 PDXDC1Q6P996 788 aa4.69□□□□□ -1.66
CTHRC1-204ENST00000520880 SLC39A5Q6ZMH5 540 aa4.69□□□□□ -1.66
CTHRC1-204ENST00000520880 TRILQ7L0X0 811 aa4.69□□□□□ -1.66
CTHRC1-204ENST00000520880 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.69□□□□□ -1.66
CTHRC1-204ENST00000520880 RASGRP3Q8IV61 690 aa4.69□□□□□ -1.66
CTHRC1-204ENST00000520880 ADGRF3Q8IZF5 1079 aa4.69□□□□□ -1.66
CTHRC1-204ENST00000520880 TXLNBQ8N3L3 684 aa4.69□□□□□ -1.66
CTHRC1-204ENST00000520880 SRFBP1Q8NEF9 429 aaKnown RBP4.69□□□□□ -1.66
CTHRC1-204ENST00000520880 NUDCD2Q8WVJ2 157 aa4.69□□□□□ -1.66
CTHRC1-204ENST00000520880 MCRS1Q96EZ8 462 aa4.69□□□□□ -1.66
CTHRC1-204ENST00000520880 MED30Q96HR3 178 aa4.69□□□□□ -1.66
CTHRC1-204ENST00000520880 TASP1Q9H6P5 420 aa4.69□□□□□ -1.66
CTHRC1-204ENST00000520880 CFAP65Q6ZU64 1925 aaKnown RBP4.69□□□□□ -1.66
CTHRC1-204ENST00000520880 PTPRTO14522 1441 aa4.69□□□□□ -1.66
CTHRC1-204ENST00000520880 PRAG1Q86YV5 1406 aa4.69□□□□□ -1.66
CTHRC1-204ENST00000520880 CNTLNQ9NXG0 1405 aa4.69□□□□□ -1.66
CTHRC1-204ENST00000520880 KIAA1210Q9ULL0 1709 aa4.69□□□□□ -1.66
CTHRC1-204ENST00000520880 PPLO60437 1756 aa4.68□□□□□ -1.66
CTHRC1-204ENST00000520880 USP47Q96K76 1375 aa4.68□□□□□ -1.66
CTHRC1-204ENST00000520880 CCDC7Q96M83 1385 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms