RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 PTF1AQ7RTS3 328 aa4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 SLC29A4Q7RTT9 530 aa4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 NANOGNBQ7Z5D8 188 aa4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 YTHDF3Q7Z739 585 aaKnown RBP4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 SESTD1Q86VW0 696 aa4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 PRIMA1Q86XR5 153 aa4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 LRRC71Q8N4P6 559 aa4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 RNF10Q8N5U6 811 aaKnown RBP4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 CELF5Q8N6W0 485 aaKnown RBP4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 BOLLQ8N9W6 283 aaKnown RBP4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 ZBTB8BQ8NAP8 495 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 FAM71BQ8TC56 605 aa4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 FBXO41Q8TF61 875 aa4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 RAPGEF4Q8WZA2 1011 aa4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 ATP6V0A1Q93050 837 aa4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 SLC35B4Q969S0 331 aa4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 RSPRY1Q96DX4 576 aa4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 MSLNLQ96KJ4 702 aa4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 SMC6Q96SB8 1091 aa4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 PARD6BQ9BYG5 372 aa4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 SYNPO2LQ9H987 977 aa4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 CPNE5Q9HCH3 593 aa4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 ARFGAP3Q9NP61 516 aa4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 ALG13Q9NP73 1137 aaKnown RBP4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 HELLSQ9NRZ9 838 aa4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 SEMA4GQ9NTN9 838 aa4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 DCAF16Q9NXF7 216 aa4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 PTGFRNQ9P2B2 879 aa4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 TUBGCP4Q9UGJ1 667 aa4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 XPO7Q9UIA9 1087 aaKnown RBP4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 HOOK1Q9UJC3 728 aaKnown RBP4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 COX11Q9Y6N1 276 aa4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 SQORQ9Y6N5 450 aa4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 FER1L4A9Z1Z3 1794 aa4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 POLR2AP24928 1970 aaKnown RBP4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 NKTRP30414 1462 aaKnown RBP4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 LMTK3Q96Q04 1460 aa4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 SBNO1A3KN83 1393 aa4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 PPLO60437 1756 aa4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 LRRIQ3A6PVS8 624 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 BOLA2-SMG1P6H3BVE0 249 aa4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 NDUFAB1O14561 156 aa4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 LSM1O15116 133 aaKnown RBP4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 WDR46O15213 610 aaKnown RBP4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 ZSCAN12O43309 604 aa4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 RGS10O43665 173 aa4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 MBD4O95243 580 aa4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 ADCY5O95622 1261 aa4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 FGFR1OPO95684 399 aaKnown RBP4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 NPSP0C0P6 89 aa4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 PHKG2P15735 406 aa4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 POLR2EP19388 210 aaKnown RBP4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 S100A1P23297 94 aa4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 EPHA3P29320 983 aa4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 LIPAP38571 399 aa4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 PLA2G5P39877 138 aa4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 AMPHP49418 695 aa4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 SUMO2P61956 95 aaKnown RBP4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 FMO1Q01740 532 aa4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 PPIDQ08752 370 aaKnown RBP4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 IFIT5Q13325 482 aaKnown RBP4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 SEMA5AQ13591 1074 aa4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 SNX1Q13596 522 aa4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 UBE4AQ14139 1066 aa4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 ARHGEF7Q14155 803 aa4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 GALEQ14376 348 aa4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 KCNB1Q14721 858 aa4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 PTPN14Q15678 1187 aa4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 TPD52L1Q16890 204 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 CCDC153Q494R4 210 aa4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 CFAP157Q5JU67 520 aa4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 MEX3CQ5U5Q3 659 aaKnown RBP4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 DCAF12L1Q5VU92 463 aa4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 KIAA1614Q5VZ46 1190 aa4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 FBXO42Q6P3S6 717 aa4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 SYCE2Q6PIF2 218 aa4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 NCCRP1Q6ZVX7 275 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 PARS2Q7L3T8 475 aaKnown RBP4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 NLRP9Q7RTR0 991 aa4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 HOOK3Q86VS8 718 aa4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 KRT78Q8N1N4 520 aa4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 TEX9Q8N6V9 391 aa4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 BPIFB1Q8TDL5 484 aa4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 ATG4AQ8WYN0 398 aa4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 RFKQ969G6 155 aa4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 ZC3H10Q96K80 434 aaKnown RBP4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 RPS6KC1Q96S38 1066 aa4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 NACAP1Q9BZK3 213 aa4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 SLC7A5P2Q9GIP4 190 aa4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 CENPHQ9H3R5 247 aa4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 TTC12Q9H892 705 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 ACTR5Q9H9F9 607 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 SMURF2Q9HAU4 748 aa4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 TCF7L2Q9NQB0 619 aa4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 MRPS18AQ9NVS2 196 aaKnown RBP4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 TFCP2L1Q9NZI6 479 aa4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 ATXN10Q9UBB4 475 aa4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 CPNE7Q9UBL6 633 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms