RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 DNAJC16Q9Y2G8 782 aa11.54□□□□□ -0.56
SMPD4-218ENST00000482171 TRDMT1O14717 391 aaKnown RBP11.54□□□□□ -0.56
SMPD4-218ENST00000482171 PAPSS1O43252 624 aaPredicted RBP11.54□□□□□ -0.56
SMPD4-218ENST00000482171 PIGRP01833 764 aa11.54□□□□□ -0.56
SMPD4-218ENST00000482171 RHOCP08134 193 aa11.54□□□□□ -0.56
SMPD4-218ENST00000482171 MAP4P27816 1152 aaKnown RBP11.54□□□□□ -0.56
SMPD4-218ENST00000482171 LAYNQ6UX15 382 aa11.54□□□□□ -0.56
SMPD4-218ENST00000482171 LGI2Q8N0V4 545 aa11.54□□□□□ -0.56
SMPD4-218ENST00000482171 TTC30BQ8N4P2 665 aa11.54□□□□□ -0.56
SMPD4-218ENST00000482171 CAPNS2Q96L46 248 aa11.54□□□□□ -0.56
SMPD4-218ENST00000482171 SNX27Q96L92 541 aa11.54□□□□□ -0.56
SMPD4-218ENST00000482171 SERPINB11Q96P15 392 aa11.54□□□□□ -0.56
SMPD4-218ENST00000482171 SIKE1Q9BRV8 207 aa11.54□□□□□ -0.56
SMPD4-218ENST00000482171 MPP6Q9NZW5 540 aa11.54□□□□□ -0.56
SMPD4-218ENST00000482171 TMEM59LQ9UK28 342 aa11.54□□□□□ -0.56
SMPD4-218ENST00000482171 MDM4O15151 490 aa11.53□□□□□ -0.56
SMPD4-218ENST00000482171 KDM1AO60341 852 aa11.53□□□□□ -0.56
SMPD4-218ENST00000482171 TPST1O60507 370 aa11.53□□□□□ -0.56
SMPD4-218ENST00000482171 TMCC1O94876 653 aa11.53□□□□□ -0.56
SMPD4-218ENST00000482171 ITGAVP06756 1048 aa11.53□□□□□ -0.56
SMPD4-218ENST00000482171 MYL4P12829 197 aa11.53□□□□□ -0.56
SMPD4-218ENST00000482171 AKT1P31749 480 aa11.53□□□□□ -0.56
SMPD4-218ENST00000482171 HADHAP40939 763 aa11.53□□□□□ -0.56
SMPD4-218ENST00000482171 OXCT1P55809 520 aa11.53□□□□□ -0.56
SMPD4-218ENST00000482171 ELAVL2Q12926 359 aaKnown RBP11.53□□□□□ -0.56
SMPD4-218ENST00000482171 TUSC3Q13454 348 aa11.53□□□□□ -0.56
SMPD4-218ENST00000482171 OASLQ15646 514 aaKnown RBP11.53□□□□□ -0.56
SMPD4-218ENST00000482171 C1orf220Q5T0J3 134 aa11.53□□□□□ -0.56
SMPD4-218ENST00000482171 FAM192AQ9GZU8 254 aa11.53□□□□□ -0.56
SMPD4-218ENST00000482171 STXBP5LQ9Y2K9 1186 aa11.53□□□□□ -0.56
SMPD4-218ENST00000482171 MYH15Q9Y2K3 1946 aa11.53□□□□□ -0.56
SMPD4-218ENST00000482171 C5orf60A6NFR6 353 aa11.53□□□□□ -0.56
SMPD4-218ENST00000482171 SERPINB5P36952 375 aa11.53□□□□□ -0.56
SMPD4-218ENST00000482171 C6orf89Q6UWU4 347 aa11.53□□□□□ -0.56
SMPD4-218ENST00000482171 C16orf59Q7L2K0 433 aa11.53□□□□□ -0.56
SMPD4-218ENST00000482171 PIGWQ7Z7B1 504 aa11.53□□□□□ -0.56
SMPD4-218ENST00000482171 RNF148Q8N7C7 305 aa11.53□□□□□ -0.56
SMPD4-218ENST00000482171 GDPD5Q8WTR4 605 aa11.53□□□□□ -0.56
SMPD4-218ENST00000482171 MRPL1Q9BYD6 325 aaKnown RBP11.53□□□□□ -0.56
SMPD4-218ENST00000482171 DENND2DQ9H6A0 471 aaPredicted RBP11.53□□□□□ -0.56
SMPD4-218ENST00000482171 PCDHGC3Q9UN70 934 aa11.53□□□□□ -0.56
SMPD4-218ENST00000482171 RUVBL2Q9Y230 463 aaKnown RBP11.53□□□□□ -0.56
SMPD4-218ENST00000482171 GIT1Q9Y2X7 761 aa11.53□□□□□ -0.56
SMPD4-218ENST00000482171 TSC22D4Q9Y3Q8 395 aa11.53□□□□□ -0.56
SMPD4-218ENST00000482171 SDK1Q7Z5N4 2213 aa11.53□□□□□ -0.56
SMPD4-218ENST00000482171 A0A0A0MRY4 1105 aa11.53□□□□□ -0.56
SMPD4-218ENST00000482171 FAM237BA0A1B0GVD1 139 aa11.53□□□□□ -0.56
SMPD4-218ENST00000482171 TM9SF1O15321 606 aa11.53□□□□□ -0.56
SMPD4-218ENST00000482171 RHOBTB1O94844 696 aa11.53□□□□□ -0.56
SMPD4-218ENST00000482171 ATG7O95352 703 aa11.53□□□□□ -0.56
SMPD4-218ENST00000482171 NFKB1P19838 968 aa11.53□□□□□ -0.56
SMPD4-218ENST00000482171 HADHBP55084 474 aaKnown RBP11.53□□□□□ -0.56
SMPD4-218ENST00000482171 MAXP61244 160 aa11.53□□□□□ -0.56
SMPD4-218ENST00000482171 CDK16Q00536 496 aa11.53□□□□□ -0.56
SMPD4-218ENST00000482171 PLD1Q13393 1074 aa11.53□□□□□ -0.56
SMPD4-218ENST00000482171 PCBP1Q15365 356 aaKnown RBP eCLIP11.53□□□□□ -0.56
SMPD4-218ENST00000482171 ZNF792Q3KQV3 632 aa11.53□□□□□ -0.56
SMPD4-218ENST00000482171 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.53□□□□□ -0.56
SMPD4-218ENST00000482171 IFNEQ86WN2 208 aa11.53□□□□□ -0.56
SMPD4-218ENST00000482171 IFNL1Q8IU54 200 aa11.53□□□□□ -0.56
SMPD4-218ENST00000482171 CALML6Q8TD86 181 aa11.53□□□□□ -0.56
SMPD4-218ENST00000482171 SPATA13Q96N96 652 aa11.53□□□□□ -0.56
SMPD4-218ENST00000482171 SRPK1Q96SB4 655 aaKnown RBP11.53□□□□□ -0.56
SMPD4-218ENST00000482171 GORASP1Q9BQQ3 440 aa11.53□□□□□ -0.56
SMPD4-218ENST00000482171 SOX13Q9UN79 622 aa11.53□□□□□ -0.56
SMPD4-218ENST00000482171 NCAM2O15394 837 aa11.52□□□□□ -0.56
SMPD4-218ENST00000482171 SEPT4O43236 478 aa11.52□□□□□ -0.56
SMPD4-218ENST00000482171 CSHL1Q14406 222 aa11.52□□□□□ -0.56
SMPD4-218ENST00000482171 TARBP2Q15633 366 aaKnown RBP11.52□□□□□ -0.56
SMPD4-218ENST00000482171 RBBP7Q16576 425 aa11.52□□□□□ -0.56
SMPD4-218ENST00000482171 PDK4Q16654 411 aa11.52□□□□□ -0.56
SMPD4-218ENST00000482171 N4BP2L1Q5TBK1 243 aaPredicted RBP11.52□□□□□ -0.56
SMPD4-218ENST00000482171 PTRHD1Q6GMV3 140 aaKnown RBP11.52□□□□□ -0.56
SMPD4-218ENST00000482171 TIGD7Q6NT04 549 aaPredicted RBP11.52□□□□□ -0.56
SMPD4-218ENST00000482171 OTOAQ7RTW8 1153 aa11.52□□□□□ -0.56
SMPD4-218ENST00000482171 ZC3H3Q8IXZ2 948 aaKnown RBP11.52□□□□□ -0.56
SMPD4-218ENST00000482171 ABCC13Q9NSE7 274 aa11.52□□□□□ -0.56
SMPD4-218ENST00000482171 RRN3Q9NYV6 651 aa11.52□□□□□ -0.56
SMPD4-218ENST00000482171 BAG5Q9UL15 447 aa11.52□□□□□ -0.56
SMPD4-218ENST00000482171 NCF1BA6NI72 391 aaPredicted RBP11.52□□□□□ -0.57
SMPD4-218ENST00000482171 NCF1CA8MVU1 366 aaPredicted RBP11.52□□□□□ -0.57
SMPD4-218ENST00000482171 SUPT3HB4E1H0 165 aa11.52□□□□□ -0.57
SMPD4-218ENST00000482171 E9PBE3 544 aa11.52□□□□□ -0.57
SMPD4-218ENST00000482171 KLHL41O60662 606 aa11.52□□□□□ -0.57
SMPD4-218ENST00000482171 GLRA3O75311 464 aa11.52□□□□□ -0.57
SMPD4-218ENST00000482171 SUPT7LO94864 414 aa11.52□□□□□ -0.57
SMPD4-218ENST00000482171 NCF1P14598 390 aaPredicted RBP11.52□□□□□ -0.57
SMPD4-218ENST00000482171 TPP2P29144 1249 aaPredicted RBP11.52□□□□□ -0.57
SMPD4-218ENST00000482171 SKIV2L2P42285 1042 aaKnown RBP11.52□□□□□ -0.57
SMPD4-218ENST00000482171 MAP3K10Q02779 954 aa11.52□□□□□ -0.57
SMPD4-218ENST00000482171 CDH17Q12864 832 aa11.52□□□□□ -0.57
SMPD4-218ENST00000482171 ITGA9Q13797 1035 aa11.52□□□□□ -0.57
SMPD4-218ENST00000482171 IMPG1Q17R60 797 aa11.52□□□□□ -0.57
SMPD4-218ENST00000482171 SOWAHAQ2M3V2 549 aa11.52□□□□□ -0.57
SMPD4-218ENST00000482171 PARP6Q2NL67 630 aa11.52□□□□□ -0.57
SMPD4-218ENST00000482171 KCTD21Q4G0X4 260 aa11.52□□□□□ -0.57
SMPD4-218ENST00000482171 TOP6BLQ8N6T0 577 aa11.52□□□□□ -0.57
SMPD4-218ENST00000482171 NDNQ99608 321 aa11.52□□□□□ -0.57
SMPD4-218ENST00000482171 APOL5Q9BWW9 433 aa11.52□□□□□ -0.57
SMPD4-218ENST00000482171 ENTPD7Q9NQZ7 604 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms