RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 PIGZQ86VD9 579 aa16.11■□□□□ 0.17
TVP23C-203ENST00000428082 IGDCC3Q8IVU1 814 aa16.11■□□□□ 0.17
TVP23C-203ENST00000428082 ZNF276Q8N554 614 aa16.11■□□□□ 0.17
TVP23C-203ENST00000428082 TTC9BQ8N6N2 239 aa16.11■□□□□ 0.17
TVP23C-203ENST00000428082 AGAP11Q8TF27 550 aa16.11■□□□□ 0.17
TVP23C-203ENST00000428082 MYCBPQ99417 103 aaPredicted RBP16.11■□□□□ 0.17
TVP23C-203ENST00000428082 FERMT1Q9BQL6 677 aa16.11■□□□□ 0.17
TVP23C-203ENST00000428082 C11orf84Q9BUA3 381 aaPredicted RBP16.11■□□□□ 0.17
TVP23C-203ENST00000428082 CSNK1G1Q9HCP0 422 aa16.11■□□□□ 0.17
TVP23C-203ENST00000428082 XAB2Q9HCS7 855 aaKnown RBP16.11■□□□□ 0.17
TVP23C-203ENST00000428082 NPHS2Q9NP85 383 aa16.11■□□□□ 0.17
TVP23C-203ENST00000428082 MKS1Q9NXB0 559 aa16.11■□□□□ 0.17
TVP23C-203ENST00000428082 MSRAQ9UJ68 235 aa16.11■□□□□ 0.17
TVP23C-203ENST00000428082 HACD1B0YJ81 288 aa16.1■□□□□ 0.17
TVP23C-203ENST00000428082 GRM6O15303 877 aa16.1■□□□□ 0.17
TVP23C-203ENST00000428082 RB1P06400 928 aa16.1■□□□□ 0.17
TVP23C-203ENST00000428082 SLC8A3P57103 927 aa16.1■□□□□ 0.17
TVP23C-203ENST00000428082 RAB30Q15771 203 aa16.1■□□□□ 0.17
TVP23C-203ENST00000428082 RAB3IL1Q8TBN0 382 aa16.1■□□□□ 0.17
TVP23C-203ENST00000428082 CENPIQ92674 756 aaPredicted RBP16.1■□□□□ 0.17
TVP23C-203ENST00000428082 CFAP36Q96G28 342 aa16.1■□□□□ 0.17
TVP23C-203ENST00000428082 FUBP3Q96I24 572 aaKnown RBP eCLIP16.1■□□□□ 0.17
TVP23C-203ENST00000428082 TCF25Q9BQ70 676 aa16.1■□□□□ 0.17
TVP23C-203ENST00000428082 CRISPLD1Q9H336 500 aa16.1■□□□□ 0.17
TVP23C-203ENST00000428082 SLC17A7Q9P2U7 560 aa16.1■□□□□ 0.17
TVP23C-203ENST00000428082 TTLL3Q9Y4R7 772 aa16.1■□□□□ 0.17
TVP23C-203ENST00000428082 WDR91A4D1P6 747 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 E7ENQ6 273 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 GOLGA8RI6L899 631 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 PAPSS1O43252 624 aaPredicted RBP16.09■□□□□ 0.17
TVP23C-203ENST00000428082 DNAJC6O75061 913 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 CXCL14O95715 111 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 APOEP02649 317 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 CNTFP26441 200 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 TARSP26639 723 aaKnown RBP16.09■□□□□ 0.17
TVP23C-203ENST00000428082 PTPN4P29074 926 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 ETV4P43268 484 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 ARFIP2P53365 341 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 CDK16Q00536 496 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 ATG16L1Q676U5 607 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 SH2D5Q6ZV89 423 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 CYS1Q717R9 158 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 PSTKQ8IV42 348 aaKnown RBP16.09■□□□□ 0.17
TVP23C-203ENST00000428082 CTAGE3PQ8IX95 158 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 GPR65Q8IYL9 337 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 CFAP61Q8NHU2 1237 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 THOC1Q96FV9 657 aaKnown RBP16.09■□□□□ 0.17
TVP23C-203ENST00000428082 HSFY1Q96LI6 401 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 SAMD11Q96NU1 681 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 PRO3102Q9H379 93 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 POPDC2Q9HBU9 364 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 DMAP1Q9NPF5 467 aaPredicted RBP16.09■□□□□ 0.17
TVP23C-203ENST00000428082 ENTPD7Q9NQZ7 604 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 FNIP2Q9P278 1114 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 RCOR3Q9P2K3 495 aaPredicted RBP16.09■□□□□ 0.17
TVP23C-203ENST00000428082 SLC27A5Q9Y2P5 690 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 CDH23Q9H251 3354 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 PATJQ8NI35 1801 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.09■□□□□ 0.17
TVP23C-203ENST00000428082 HHLA1C9JL84 531 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 HGSO14964 777 aaPredicted RBP16.09■□□□□ 0.17
TVP23C-203ENST00000428082 TEX28O15482 410 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 APRTP07741 180 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 CNPP09543 421 aaKnown RBP16.09■□□□□ 0.17
TVP23C-203ENST00000428082 PYGBP11216 843 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 FDFT1P37268 417 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 GRIK1P39086 918 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 RPL34P49207 117 aaKnown RBP16.09■□□□□ 0.17
TVP23C-203ENST00000428082 HDAC4P56524 1084 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 UBE3AQ05086 875 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 SMARCB1Q12824 385 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 CAMK1Q14012 370 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 TAF1BQ53T94 588 aaPredicted RBP16.09■□□□□ 0.17
TVP23C-203ENST00000428082 EFHC1Q5JVL4 640 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 WASHC2DQ5SRD0 308 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 PLPP4Q5VZY2 271 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 PPP2R2DQ66LE6 453 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 STRADAQ7RTN6 431 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 GPRIN1Q7Z2K8 1008 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 SCUBE3Q8IX30 993 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 PPM1NQ8N819 430 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 GSDMBQ8TAX9 411 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 SPPL2BQ8TCT7 592 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 KHSRPQ92945 711 aaKnown RBP eCLIP16.09■□□□□ 0.172e-15■■■□□ 16.2
TVP23C-203ENST00000428082 PIWIL1Q96J94 861 aaKnown RBP16.09■□□□□ 0.17
TVP23C-203ENST00000428082 SERAC1Q96JX3 654 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 QKIQ96PU8 341 aaKnown RBP eCLIP16.09■□□□□ 0.17
TVP23C-203ENST00000428082 ADAM33Q9BZ11 813 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 TLR9Q9NR96 1032 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.09■□□□□ 0.17
TVP23C-203ENST00000428082 HAO1Q9UJM8 370 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 SSX2IPQ9Y2D8 614 aa16.09■□□□□ 0.17
TVP23C-203ENST00000428082 HIDE1A8MVS5 230 aa16.08■□□□□ 0.16
TVP23C-203ENST00000428082 TRIM49D1C9J1S8 452 aa16.08■□□□□ 0.16
TVP23C-203ENST00000428082 SOAT2O75908 522 aa16.08■□□□□ 0.16
TVP23C-203ENST00000428082 STK10O94804 968 aaKnown RBP16.08■□□□□ 0.16
TVP23C-203ENST00000428082 ABLIM3O94929 683 aa16.08■□□□□ 0.16
TVP23C-203ENST00000428082 ANP32DO95626 131 aa16.08■□□□□ 0.16
TVP23C-203ENST00000428082 LMNAP02545 664 aaKnown RBP16.08■□□□□ 0.16
TVP23C-203ENST00000428082 ATP5BP06576 529 aaKnown RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms