RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 MTFR1Q15390 333 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 HPS6Q86YV9 775 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 FUKQ8N0W3 1084 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 SYNPOQ8N3V7 929 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 AGPAT5Q9NUQ2 364 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 SLC1A1P43005 524 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 SEPHS1P49903 392 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 IL2P60568 153 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 OLR1P78380 273 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 USP4Q13107 963 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 PDK3Q15120 406 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 LNX2Q8N448 690 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 ZNF611Q8N823 705 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 TDRD5Q8NAT2 981 aaKnown RBP11.3□□□□□ -0.6
MSH6-201ENST00000234420 OSMRQ99650 979 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 PHACTR1Q9C0D0 580 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 RMND5AQ9H871 391 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 NUDT5Q9UKK9 219 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 ZFYVE16Q7Z3T8 1539 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 TOP2BQ02880 1626 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 CCRL2O00421 344 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 RHOCP08134 193 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 MSL3P1P0C860 447 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 SLC26A3P40879 764 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 CASP9P55211 416 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 FAM83EQ2M2I3 478 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 FBXL19Q6PCT2 694 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 DHFR2Q86XF0 187 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 PJA1Q8NG27 643 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 DGCR14Q96DF8 476 aaKnown RBP11.3□□□□□ -0.6
MSH6-201ENST00000234420 ARMC7Q9H6L4 198 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 ARMCX1Q9P291 453 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 EME2A4GXA9 379 aaPredicted RBP11.3□□□□□ -0.6
MSH6-201ENST00000234420 ARHGEF33A8MVX0 844 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 STX11O75558 287 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 CBX6O95503 412 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 CYP2C8P10632 490 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 MCAMP43121 646 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 COPZ1P61923 177 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 MRPS22P82650 360 aaKnown RBP11.3□□□□□ -0.6
MSH6-201ENST00000234420 PPP2R2DQ66LE6 453 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 USP38Q8NB14 1042 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 PHC3Q8NDX5 983 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 SETD9Q8NE22 299 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 COX4I2Q96KJ9 171 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 TMEM47Q9BQJ4 181 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 SLC4A5Q9BY07 1137 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 SETD4Q9NVD3 440 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 PP2D1A8MPX8 630 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 NAA20P61599 178 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 SLC18A3Q16572 532 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 TYSND1Q2T9J0 566 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 ZNF544Q6NX49 715 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 AGMOQ6ZNB7 445 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 AKT1S1Q96B36 256 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 S100PBPQ96BU1 408 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 AP1S3Q96PC3 154 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 BBS4Q96RK4 519 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 ATPIF1Q9UII2 106 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 ZFYVE9O95405 1425 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 KDM6BO15054 1643 aa11.29□□□□□ -0.6
MSH6-201ENST00000234420 MROH7-TTC4A0A0A0MT08 1334 aa11.29□□□□□ -0.6
MSH6-201ENST00000234420 FOXN1O15353 648 aa11.29□□□□□ -0.6
MSH6-201ENST00000234420 LTFP02788 710 aa11.29□□□□□ -0.6
MSH6-201ENST00000234420 HIST1H2ABP04908 130 aa11.29□□□□□ -0.6
MSH6-201ENST00000234420 ACO1P21399 889 aaKnown RBP11.29□□□□□ -0.6
MSH6-201ENST00000234420 MAZP56270 477 aaKnown RBP11.29□□□□□ -0.6
MSH6-201ENST00000234420 RAB2AP61019 212 aa11.29□□□□□ -0.6
MSH6-201ENST00000234420 ZIK1Q3SY52 487 aaPredicted RBP11.29□□□□□ -0.6
MSH6-201ENST00000234420 HIST3H2AQ7L7L0 130 aa11.29□□□□□ -0.6
MSH6-201ENST00000234420 EFL1Q7Z2Z2 1120 aaKnown RBP11.29□□□□□ -0.6
MSH6-201ENST00000234420 MINDY2Q8NBR6 621 aa11.29□□□□□ -0.6
MSH6-201ENST00000234420 ZSWIM2Q8NEG5 633 aa11.29□□□□□ -0.6
MSH6-201ENST00000234420 ING5Q8WYH8 240 aa11.29□□□□□ -0.6
MSH6-201ENST00000234420 HIST1H2ACQ93077 130 aa11.29□□□□□ -0.6
MSH6-201ENST00000234420 FAM120BQ96EK7 910 aaKnown RBP11.29□□□□□ -0.6
MSH6-201ENST00000234420 BCLAF3A2AJT9 711 aaKnown RBP11.29□□□□□ -0.6
MSH6-201ENST00000234420 FOXM1Q08050 763 aa11.29□□□□□ -0.6
MSH6-201ENST00000234420 IKBKEQ14164 716 aa11.29□□□□□ -0.6
MSH6-201ENST00000234420 SLC15A2Q16348 729 aa11.29□□□□□ -0.6
MSH6-201ENST00000234420 PSMD5Q16401 504 aa11.29□□□□□ -0.6
MSH6-201ENST00000234420 QRICH1Q2TAL8 776 aa11.29□□□□□ -0.6
MSH6-201ENST00000234420 RNASE12Q5GAN4 147 aaKnown RBP11.29□□□□□ -0.6
MSH6-201ENST00000234420 EEF1AKMT1Q8WVE0 214 aa11.29□□□□□ -0.6
MSH6-201ENST00000234420 ZNF669Q96BR6 464 aaPredicted RBP11.29□□□□□ -0.6
MSH6-201ENST00000234420 ZHX1-C8orf76Q96EF9 292 aa11.29□□□□□ -0.6
MSH6-201ENST00000234420 NSMCE2Q96MF7 247 aa11.29□□□□□ -0.6
MSH6-201ENST00000234420 TMEM168Q9H0V1 697 aa11.29□□□□□ -0.6
MSH6-201ENST00000234420 NT5MQ9NPB1 228 aa11.29□□□□□ -0.6
MSH6-201ENST00000234420 DDIT4Q9NX09 232 aa11.29□□□□□ -0.6
MSH6-201ENST00000234420 LIMD1Q9UGP4 676 aa11.29□□□□□ -0.6
MSH6-201ENST00000234420 PLOD2O00469 737 aa11.29□□□□□ -0.6
MSH6-201ENST00000234420 CHP2O43745 196 aa11.29□□□□□ -0.6
MSH6-201ENST00000234420 XYLBO75191 536 aa11.29□□□□□ -0.6
MSH6-201ENST00000234420 ALOX5P09917 674 aa11.29□□□□□ -0.6
MSH6-201ENST00000234420 BIKQ13323 160 aa11.29□□□□□ -0.6
MSH6-201ENST00000234420 MSLNQ13421 630 aaPredicted RBP11.29□□□□□ -0.6
MSH6-201ENST00000234420 RAPSNQ13702 412 aa11.29□□□□□ -0.6
MSH6-201ENST00000234420 CWF19L1Q69YN2 538 aaKnown RBP11.29□□□□□ -0.6
MSH6-201ENST00000234420 MEIOBQ8N635 442 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms