RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR48, Length 113 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR48snR48 KIP3P53086 805 aaKnown RBP3.63□□□□□ -1.83
snR48snR48 BIO5P53744 561 aaKnown RBP3.63□□□□□ -1.83
snR48snR48 RCM1P53972 490 aa3.63□□□□□ -1.83
snR48snR48 SPO71Q03868 1245 aa3.63□□□□□ -1.83
snR48snR48 ERS1P17261 260 aa3.62□□□□□ -1.83
snR48snR48 CLU1Q03690 1277 aaKnown RBP3.62□□□□□ -1.83
snR48snR48 ADP1P25371 1049 aa3.61□□□□□ -1.83
snR48snR48 TFA2P36145 328 aa3.61□□□□□ -1.83
snR48snR48 CTS1P29029 562 aa3.6□□□□□ -1.83
snR48snR48 SHM2P37291 469 aaKnown RBP3.6□□□□□ -1.83
snR48snR48 GIP1P38229 639 aa3.6□□□□□ -1.83
snR48snR48 MRPL22P53881 309 aa3.6□□□□□ -1.83
snR48snR48 LPX1Q12405 387 aaKnown RBP3.6□□□□□ -1.83
snR48snR48 BIO2P32451 375 aa3.59□□□□□ -1.83
snR48snR48 TOD6P34219 525 aa3.59□□□□□ -1.83
snR48snR48 YIL165CP40446 119 aa3.59□□□□□ -1.83
snR48snR48 BOI1P38041 980 aaKnown RBP3.58□□□□□ -1.84
snR48snR48 BSD2P38356 321 aa3.58□□□□□ -1.84
snR48snR48 ALD3P54114 506 aa3.57□□□□□ -1.84
snR48snR48 YDL177CQ12257 170 aa3.57□□□□□ -1.84
snR48snR48 SNM1P40993 198 aa3.56□□□□□ -1.84
snR48snR48 SLI1P53304 468 aa3.56□□□□□ -1.84
snR48snR48 YOR223WQ12015 292 aa3.56□□□□□ -1.84
snR48snR48 DYS1P38791 387 aa3.55□□□□□ -1.84
snR48snR48 SSY1Q03770 852 aa3.55□□□□□ -1.84
snR48snR48 YPL277CQ08989 487 aa3.55□□□□□ -1.84
snR48snR48 PUS9Q12069 462 aa3.55□□□□□ -1.84
snR48snR48 YLR358CO13565 187 aa3.54□□□□□ -1.84
snR48snR48 GPT2P36148 743 aa3.54□□□□□ -1.84
snR48snR48 FAR11P53917 953 aa3.54□□□□□ -1.84
snR48snR48 VMA3P25515 160 aa3.53□□□□□ -1.84
snR48snR48 ISW1P38144 1129 aa3.53□□□□□ -1.84
snR48snR48 FUS1P11710 512 aa3.52□□□□□ -1.85
snR48snR48 PRE10P21242 288 aaKnown RBP RIP-Chip data3.52□□□□□ -1.85not detected
snR48snR48 YNL108CP53929 270 aa3.52□□□□□ -1.85
snR48snR48 TRE1Q08919 783 aa3.52□□□□□ -1.85
snR48snR48 RPS13P05756 151 aaKnown RBP3.5□□□□□ -1.85
snR48snR48 HVG1P0CE11 249 aa3.5□□□□□ -1.85
snR48snR48 KIN1P13185 1064 aa3.5□□□□□ -1.85
snR48snR48 MRPL33P20084 86 aa3.5□□□□□ -1.85
snR48snR48 PEX7P39108 375 aa3.5□□□□□ -1.85
snR48snR48 ACS2P52910 683 aaKnown RBP3.5□□□□□ -1.85
snR48snR48 HAS1Q03532 505 aaKnown RBP3.5□□□□□ -1.85
snR48snR48 MRX10Q05648 414 aa3.5□□□□□ -1.85
snR48snR48 GAS4Q08271 471 aa3.5□□□□□ -1.85
snR48snR48 GUA1P38625 525 aaKnown RBP3.49□□□□□ -1.85
snR48snR48 NEO1P40527 1151 aa3.49□□□□□ -1.85
snR48snR48 CAB1Q04430 367 aa3.49□□□□□ -1.85
snR48snR48 EMG1Q06287 252 aaKnown RBP3.48□□□□□ -1.85
snR48snR48 RAD53P22216 821 aa3.47□□□□□ -1.85
snR48snR48 PEP12P32854 288 aa3.47□□□□□ -1.85
snR48snR48 LDH1P38139 375 aa3.47□□□□□ -1.85
snR48snR48 PHO87P25360 923 aa3.46□□□□□ -1.86
snR48snR48 PRO1P32264 428 aa3.46□□□□□ -1.86
snR48snR48 TRM2P33753 639 aa3.46□□□□□ -1.86
snR48snR48 MSE1P48525 536 aa3.46□□□□□ -1.86
snR48snR48 DOT1Q04089 582 aaKnown RBP3.46□□□□□ -1.86
snR48snR48 RPS4AP0CX35 261 aaKnown RBP3.45□□□□□ -1.86
snR48snR48 RPS4BP0CX36 261 aaKnown RBP3.45□□□□□ -1.86
snR48snR48 HAP4P14064 554 aa3.45□□□□□ -1.86
snR48snR48 BRL1P38770 471 aa3.45□□□□□ -1.86
snR48snR48 YJR124CP47159 448 aa3.45□□□□□ -1.86
snR48snR48 ALT1P52893 592 aa3.45□□□□□ -1.86
snR48snR48 MSN1P22148 382 aa3.44□□□□□ -1.86
snR48snR48 TAT2P38967 592 aa3.44□□□□□ -1.86
snR48snR48 YVC1Q12324 675 aa3.44□□□□□ -1.86
snR48snR48 ETP1P38748 585 aaKnown RBP3.43□□□□□ -1.86
snR48snR48 MPT5P39016 859 aaKnown RBP RIP-Chip data3.43□□□□□ -1.86not detected
snR48snR48 CTF4Q01454 927 aa3.43□□□□□ -1.86
snR48snR48 YMR074CQ04773 145 aa3.42□□□□□ -1.86
snR48snR48 PKC1P24583 1151 aa3.41□□□□□ -1.86
snR48snR48 SNO2P53823 222 aa3.41□□□□□ -1.86
snR48snR48 EAR1Q03212 550 aa3.41□□□□□ -1.86
snR48snR48 YDR132CQ03900 495 aa3.41□□□□□ -1.86
snR48snR48 YLL054CQ12244 843 aa3.41□□□□□ -1.86
snR48snR48 GLO4Q12320 285 aa3.41□□□□□ -1.86
snR48snR48 ENO1P00924 437 aaKnown RBP3.4□□□□□ -1.87
snR48snR48 PTC7P38797 343 aa3.4□□□□□ -1.87
snR48snR48 FET4P40988 552 aa3.4□□□□□ -1.87
snR48snR48 ROM1P53046 1155 aa3.4□□□□□ -1.87
snR48snR48 SUV3P32580 737 aa3.39□□□□□ -1.87
snR48snR48 YBR287WP38355 427 aa3.39□□□□□ -1.87
snR48snR48 CWH41P53008 833 aa3.39□□□□□ -1.87
snR48snR48 AIM46P38885 310 aa3.38□□□□□ -1.87
snR48snR48 MSH4P40965 878 aaPredicted RBP3.38□□□□□ -1.87
snR48snR48 VAN1P23642 535 aa3.37□□□□□ -1.87
snR48snR48 CHS7P38843 316 aa3.37□□□□□ -1.87
snR48snR48 GCV1P48015 400 aa3.37□□□□□ -1.87
snR48snR48 SUN4P53616 420 aa3.36□□□□□ -1.87
snR48snR48 BDF2Q07442 638 aa3.36□□□□□ -1.87
snR48snR48 YBR197CP38306 217 aa3.35□□□□□ -1.87
snR48snR48 GTS1P40956 396 aa3.35□□□□□ -1.87
snR48snR48 FOX2Q02207 900 aaKnown RBP3.35□□□□□ -1.87
snR48snR48 TRS33Q99394 268 aa3.34□□□□□ -1.87
snR48snR48 URN1Q06525 465 aaKnown RBP3.33□□□□□ -1.88
snR48snR48 PMI40P29952 429 aaKnown RBP3.32□□□□□ -1.88
snR48snR48 YIG1Q08956 461 aa3.32□□□□□ -1.88
snR48snR48 SMY2P32909 740 aaKnown RBP3.3□□□□□ -1.88
snR48snR48 DMA1P38823 416 aa3.3□□□□□ -1.88
snR48snR48 FIR1P40020 876 aa3.3□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 26.9 ms