RNA–Protein interactions for RNA: snR47

snR47, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR47, Length 99 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR47snR47 HXT5P38695 592 aa1.66□□□□□ -2.14
snR47snR47 YPP1P46951 817 aa1.66□□□□□ -2.14
snR47snR47 YPL277CQ08989 487 aa1.66□□□□□ -2.14
snR47snR47 ERS1P17261 260 aa1.65□□□□□ -2.15
snR47snR47 INP51P40559 946 aaKnown RBP1.65□□□□□ -2.15
snR47snR47 KIP3P53086 805 aaKnown RBP1.65□□□□□ -2.15
snR47snR47 YOR296WQ08748 1289 aa1.65□□□□□ -2.15
snR47snR47 RPS13P05756 151 aaKnown RBP1.64□□□□□ -2.15
snR47snR47 CYT1P07143 309 aa1.64□□□□□ -2.15
snR47snR47 QDR2P40474 542 aa1.64□□□□□ -2.15
snR47snR47 MSE1P48525 536 aa1.64□□□□□ -2.15
snR47snR47 PPT1P53043 513 aa1.64□□□□□ -2.15
snR47snR47 BIO5P53744 561 aaKnown RBP1.64□□□□□ -2.15
snR47snR47 SPO71Q03868 1245 aa1.64□□□□□ -2.15
snR47snR47 TRM2P33753 639 aa1.63□□□□□ -2.15
snR47snR47 TFA2P36145 328 aa1.63□□□□□ -2.15
snR47snR47 YJL181WP46987 611 aa1.63□□□□□ -2.15
snR47snR47 BDF2Q07442 638 aa1.63□□□□□ -2.15
snR47snR47 UBP1P25037 809 aa1.62□□□□□ -2.15
snR47snR47 PEX7P39108 375 aa1.62□□□□□ -2.15
snR47snR47 CTF4Q01454 927 aa1.62□□□□□ -2.15
snR47snR47 SSY1Q03770 852 aa1.62□□□□□ -2.15
snR47snR47 BOI1P38041 980 aaKnown RBP1.61□□□□□ -2.15
snR47snR47 CHS7P38843 316 aa1.61□□□□□ -2.15
snR47snR47 YIL165CP40446 119 aa1.61□□□□□ -2.15
snR47snR47 ALD3P54114 506 aa1.61□□□□□ -2.15
snR47snR47 TRE1Q08919 783 aa1.61□□□□□ -2.15
snR47snR47 YOR223WQ12015 292 aa1.61□□□□□ -2.15
snR47snR47 TSC13Q99190 310 aa1.61□□□□□ -2.15
snR47snR47 GPT2P36148 743 aa1.6□□□□□ -2.15
snR47snR47 GIP1P38229 639 aa1.6□□□□□ -2.15
snR47snR47 TAT2P38967 592 aa1.6□□□□□ -2.15
snR47snR47 PDI1P17967 522 aaKnown RBP1.59□□□□□ -2.15
snR47snR47 BSD2P38356 321 aa1.59□□□□□ -2.15
snR47snR47 MPT5P39016 859 aaKnown RBP RIP-Chip data1.59□□□□□ -2.15not detected
snR47snR47 SUN4P53616 420 aa1.59□□□□□ -2.15
snR47snR47 FAR11P53917 953 aa1.59□□□□□ -2.15
snR47snR47 HVG1P0CE11 249 aa1.58□□□□□ -2.16
snR47snR47 SUP45P12385 437 aaKnown RBP1.58□□□□□ -2.16
snR47snR47 ATF1P40353 525 aa1.58□□□□□ -2.16
snR47snR47 YDR132CQ03900 495 aa1.58□□□□□ -2.16
snR47snR47 FUS1P11710 512 aa1.57□□□□□ -2.16
snR47snR47 ETP1P38748 585 aaKnown RBP1.57□□□□□ -2.16
snR47snR47 RIM21P48565 533 aa1.57□□□□□ -2.16
snR47snR47 ALT1P52893 592 aa1.57□□□□□ -2.16
snR47snR47 SNO2P53823 222 aa1.57□□□□□ -2.16
snR47snR47 HAS1Q03532 505 aaKnown RBP1.57□□□□□ -2.16
snR47snR47 YVC1Q12324 675 aa1.57□□□□□ -2.16
snR47snR47 RPS4AP0CX35 261 aaKnown RBP1.56□□□□□ -2.16
snR47snR47 RPS4BP0CX36 261 aaKnown RBP1.56□□□□□ -2.16
snR47snR47 PRO1P32264 428 aa1.56□□□□□ -2.16
snR47snR47 LDH1P38139 375 aa1.56□□□□□ -2.16
snR47snR47 ISW1P38144 1129 aa1.56□□□□□ -2.16
snR47snR47 YBL036CP38197 257 aa1.56□□□□□ -2.16
snR47snR47 DYS1P38791 387 aa1.56□□□□□ -2.16
snR47snR47 ENO2P00925 437 aaKnown RBP1.55□□□□□ -2.16
snR47snR47 PMI40P29952 429 aaKnown RBP1.55□□□□□ -2.16
snR47snR47 NEO1P40527 1151 aa1.55□□□□□ -2.16
snR47snR47 IOC3P43596 787 aa1.55□□□□□ -2.16
snR47snR47 EAR1Q03212 550 aa1.55□□□□□ -2.16
snR47snR47 DOT1Q04089 582 aaKnown RBP1.55□□□□□ -2.16
snR47snR47 URN1Q06525 465 aaKnown RBP1.55□□□□□ -2.16
snR47snR47 VMA3P25515 160 aa1.54□□□□□ -2.16
snR47snR47 PTC7P38797 343 aa1.54□□□□□ -2.16
snR47snR47 AIM21P40563 679 aa1.54□□□□□ -2.16
snR47snR47 EMG1Q06287 252 aaKnown RBP1.54□□□□□ -2.16
snR47snR47 MRPL33P20084 86 aa1.53□□□□□ -2.16
snR47snR47 BIO2P32451 375 aa1.53□□□□□ -2.16
snR47snR47 YJR124CP47159 448 aa1.53□□□□□ -2.16
snR47snR47 CAB1Q04430 367 aa1.53□□□□□ -2.16
snR47snR47 NTO1Q12311 748 aa1.53□□□□□ -2.16
snR47snR47 HCM1P25364 564 aa1.52□□□□□ -2.17
snR47snR47 MSH4P40965 878 aaPredicted RBP1.52□□□□□ -2.17
snR47snR47 PPM2Q08282 695 aa1.52□□□□□ -2.17
snR47snR47 YLL054CQ12244 843 aa1.52□□□□□ -2.17
snR47snR47 GTS1P40956 396 aa1.51□□□□□ -2.17
snR47snR47 GCV1P48015 400 aa1.51□□□□□ -2.17
snR47snR47 ACS2P52910 683 aaKnown RBP1.51□□□□□ -2.17
snR47snR47 YMR074CQ04773 145 aa1.51□□□□□ -2.17
snR47snR47 GAS4Q08271 471 aa1.51□□□□□ -2.17
snR47snR47 GLO4Q12320 285 aa1.51□□□□□ -2.17
snR47snR47 MSN1P22148 382 aa1.5□□□□□ -2.17
snR47snR47 STE11P23561 717 aa1.5□□□□□ -2.17
snR47snR47 DOM34P33309 386 aa1.5□□□□□ -2.17
snR47snR47 OAR1P35731 278 aa1.5□□□□□ -2.17
snR47snR47 FET4P40988 552 aa1.5□□□□□ -2.17
snR47snR47 LGE1Q02796 332 aaKnown RBP1.5□□□□□ -2.17
snR47snR47 GCN5Q03330 439 aa1.5□□□□□ -2.17
snR47snR47 PEP12P32854 288 aa1.49□□□□□ -2.17
snR47snR47 CUE2P36075 443 aaKnown RBP1.49□□□□□ -2.17
snR47snR47 SPT20P50875 604 aa1.49□□□□□ -2.17
snR47snR47 MRX10Q05648 414 aa1.49□□□□□ -2.17
snR47snR47 PHO87P25360 923 aa1.48□□□□□ -2.17
snR47snR47 MOH1P38191 138 aa1.48□□□□□ -2.17
snR47snR47 MEF2P39677 819 aa1.48□□□□□ -2.17
snR47snR47 YNL108CP53929 270 aa1.48□□□□□ -2.17
snR47snR47 KIN4Q01919 800 aa1.48□□□□□ -2.17
snR47snR47 HAP4P14064 554 aa1.47□□□□□ -2.17
snR47snR47 SMY2P32909 740 aaKnown RBP1.47□□□□□ -2.17
snR47snR47 YBR287WP38355 427 aa1.47□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 57 ms