RNA–Protein interactions for RNA: YOL110W

SHR5, Transcript of Palmitoyltransferase subunit, yeastyeast

Gene SHR5, Length 714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR5YOL110W YGR117CP53270 476 aa16.88■□□□□ 0.29
SHR5YOL110W CRG1P38892 291 aaRIP-Chip data16.87■□□□□ 0.29not detected
SHR5YOL110W YJL171CP46992 396 aa16.87■□□□□ 0.29
SHR5YOL110W UFD2P54860 961 aa16.87■□□□□ 0.29
SHR5YOL110W SPN1Q06505 410 aaPredicted RBP16.87■□□□□ 0.29
SHR5YOL110W PEP3P27801 918 aa16.86■□□□□ 0.29
SHR5YOL110W UTP7P40055 554 aaKnown RBP16.86■□□□□ 0.29
SHR5YOL110W MTC3P53077 123 aa16.86■□□□□ 0.29
SHR5YOL110W ESF1Q06344 628 aaKnown RBP16.86■□□□□ 0.29
SHR5YOL110W RPS15Q01855 142 aaKnown RBP16.85■□□□□ 0.29
SHR5YOL110W AAD16Q02895 342 aa16.85■□□□□ 0.29
SHR5YOL110W KEL3Q08979 651 aaPredicted RBP16.85■□□□□ 0.29
SHR5YOL110W CHO2P05374 869 aaKnown RBP16.84■□□□□ 0.29
SHR5YOL110W EMP47P43555 445 aa16.84■□□□□ 0.29
SHR5YOL110W SRS2P12954 1174 aa16.83■□□□□ 0.28
SHR5YOL110W SIS2P36024 562 aa16.83■□□□□ 0.28
SHR5YOL110W PCL8Q08966 492 aa16.83■□□□□ 0.28
SHR5YOL110W CBP1P07252 654 aa16.82■□□□□ 0.28
SHR5YOL110W PCT1P13259 424 aa16.82■□□□□ 0.28
SHR5YOL110W RER2P35196 286 aa16.82■□□□□ 0.28
SHR5YOL110W YHL050CP38721 697 aa16.82■□□□□ 0.28
SHR5YOL110W MSH4P40965 878 aaPredicted RBP16.82■□□□□ 0.28
SHR5YOL110W RAD61Q99359 647 aa16.81■□□□□ 0.28
SHR5YOL110W GSC2P40989 1895 aa16.81■□□□□ 0.28
SHR5YOL110W OPY1P38271 328 aa16.8■□□□□ 0.28
SHR5YOL110W VID27P40157 782 aa16.8■□□□□ 0.28
SHR5YOL110W ARP5P53946 755 aa16.8■□□□□ 0.28
SHR5YOL110W EST2Q06163 884 aa16.79■□□□□ 0.28
SHR5YOL110W PUS5Q06244 254 aa16.79■□□□□ 0.28
SHR5YOL110W ADP1P25371 1049 aa16.78■□□□□ 0.28
SHR5YOL110W VID28P40547 921 aa16.78■□□□□ 0.28
SHR5YOL110W ANP1P32629 500 aa16.77■□□□□ 0.28
SHR5YOL110W MYO3P36006 1272 aa16.76■□□□□ 0.27
SHR5YOL110W NIT1P40447 199 aa16.76■□□□□ 0.27
SHR5YOL110W TSR3Q12094 313 aaKnown RBP16.76■□□□□ 0.27
SHR5YOL110W PMA1P05030 918 aaKnown RBP16.75■□□□□ 0.27
SHR5YOL110W YKE2P52553 114 aa16.75■□□□□ 0.27
SHR5YOL110W MPH3P0CE00 602 aa16.74■□□□□ 0.27
SHR5YOL110W RAD53P22216 821 aa16.74■□□□□ 0.27
SHR5YOL110W RIT1P23796 513 aa16.74■□□□□ 0.27
SHR5YOL110W FBP26P32604 452 aa16.74■□□□□ 0.27
SHR5YOL110W YBL028CP38202 106 aa16.74■□□□□ 0.27
SHR5YOL110W VPS8P39702 1274 aa16.74■□□□□ 0.27
SHR5YOL110W YDL124WQ07551 312 aaKnown RBP16.74■□□□□ 0.27
SHR5YOL110W PRE8P23639 250 aa16.73■□□□□ 0.27
SHR5YOL110W SNU71P53207 620 aaKnown RBP16.73■□□□□ 0.27
SHR5YOL110W VPS20Q04272 221 aa16.73■□□□□ 0.27
SHR5YOL110W KIN1P13185 1064 aa16.72■□□□□ 0.27
SHR5YOL110W SRM1P21827 482 aa16.72■□□□□ 0.27
SHR5YOL110W PEA2P40091 420 aa16.72■□□□□ 0.27
SHR5YOL110W PEX21P50091 288 aa16.72■□□□□ 0.27
SHR5YOL110W HDA1P53973 706 aa16.72■□□□□ 0.27
SHR5YOL110W TFC6Q06339 672 aa16.72■□□□□ 0.27
SHR5YOL110W RPL19AP0CX82 189 aaKnown RBP16.71■□□□□ 0.27
SHR5YOL110W RPL19BP0CX83 189 aaPredicted RBP16.71■□□□□ 0.27
SHR5YOL110W MATALPHA2P0CY08 210 aa16.71■□□□□ 0.27
SHR5YOL110W HMLALPHA2P0CY09 210 aa16.71■□□□□ 0.27
SHR5YOL110W GAL2P13181 574 aa16.71■□□□□ 0.27
SHR5YOL110W CST26P38226 397 aa16.71■□□□□ 0.27
SHR5YOL110W KEL1P38853 1164 aaKnown RBP16.71■□□□□ 0.27
SHR5YOL110W VHR2P40041 505 aa16.71■□□□□ 0.27
SHR5YOL110W ECM23Q02710 187 aa16.71■□□□□ 0.27
SHR5YOL110W PRO3P32263 286 aaKnown RBP16.7■□□□□ 0.26
SHR5YOL110W ALG2P43636 503 aa16.69■□□□□ 0.26
SHR5YOL110W PTK2P47116 818 aaKnown RBP16.69■□□□□ 0.26
SHR5YOL110W NPA3P47122 385 aa16.69■□□□□ 0.26
SHR5YOL110W CWC15Q03772 175 aaKnown RBP16.69■□□□□ 0.26
SHR5YOL110W MAK31P23059 88 aa16.68■□□□□ 0.26
SHR5YOL110W TPS3P38426 1054 aaKnown RBP16.68■□□□□ 0.26
SHR5YOL110W CTF18P49956 741 aa16.68■□□□□ 0.26
SHR5YOL110W PSK2Q08217 1101 aa16.68■□□□□ 0.26
SHR5YOL110W CSR2Q12734 1121 aa16.68■□□□□ 0.26
SHR5YOL110W PFK2P16862 959 aaKnown RBP RIP-Chip data16.67■□□□□ 0.26not detected
SHR5YOL110W YHL017WP38745 532 aa16.67■□□□□ 0.26
SHR5YOL110W UBP10P53874 792 aaPredicted RBP16.67■□□□□ 0.26
SHR5YOL110W LSP1Q12230 341 aaKnown RBP16.67■□□□□ 0.26
SHR5YOL110W VPS24P36095 224 aaKnown RBP16.66■□□□□ 0.26
SHR5YOL110W TTI1P36097 1038 aa16.66■□□□□ 0.26
SHR5YOL110W SKG3Q06315 1026 aa16.66■□□□□ 0.26
SHR5YOL110W TUB2P02557 457 aaKnown RBP16.65■□□□□ 0.26
SHR5YOL110W SSA4P22202 642 aaKnown RBP16.65■□□□□ 0.26
SHR5YOL110W PES4P39684 611 aa16.65■□□□□ 0.26
SHR5YOL110W CSM2P40465 213 aa16.65■□□□□ 0.26
SHR5YOL110W EPL1P43572 832 aa16.65■□□□□ 0.26
SHR5YOL110W RPT6Q01939 405 aaKnown RBP16.65■□□□□ 0.26
SHR5YOL110W MYO5Q04439 1219 aaKnown RBP16.65■□□□□ 0.26
SHR5YOL110W CHS3P29465 1165 aa16.64■□□□□ 0.25
SHR5YOL110W MAL31P38156 614 aa16.64■□□□□ 0.25
SHR5YOL110W AKR1P39010 764 aa16.64■□□□□ 0.25
SHR5YOL110W BUD6P41697 788 aa16.64■□□□□ 0.25
SHR5YOL110W ENT3P47160 408 aa16.64■□□□□ 0.25
SHR5YOL110W LAP2Q10740 671 aa16.64■□□□□ 0.25
SHR5YOL110W BIK1P11709 440 aa16.63■□□□□ 0.25
SHR5YOL110W RPL8BP29453 256 aaKnown RBP16.63■□□□□ 0.25
SHR5YOL110W IME2P32581 645 aa16.63■□□□□ 0.25
SHR5YOL110W CLF1Q12309 687 aaPredicted RBP16.63■□□□□ 0.25
SHR5YOL110W ACE2P21192 770 aa16.62■□□□□ 0.25
SHR5YOL110W SPT21P35209 758 aa16.62■□□□□ 0.25
SHR5YOL110W YOR111WQ99210 232 aa16.62■□□□□ 0.25
SHR5YOL110W RNR3P21672 869 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 5,963 RNA–protein pairs in 83.7 ms