RNA–Protein interactions for RNA: YMR260C

TIF11, Transcript of Translation initiation factor eIF1A, yeast

Gene TIF11, Length 462 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF11	YMR260C	RAD55	P38953	406 aa		4.99	□□□□□ -1.61
TIF11	YMR260C	YJL181W	P46987	611 aa		4.99	□□□□□ -1.61
TIF11	YMR260C	INP52	P50942	1183 aa		4.99	□□□□□ -1.61
TIF11	YMR260C	SUT1	P53032	299 aa	Known RBP	4.99	□□□□□ -1.61
TIF11	YMR260C	TIF6	Q12522	245 aa	Known RBP	4.99	□□□□□ -1.61
TIF11	YMR260C	HVG1	P0CE11	249 aa		4.98	□□□□□ -1.61
TIF11	YMR260C	COQ2	P32378	372 aa		4.98	□□□□□ -1.61
TIF11	YMR260C	BOL3	P39724	118 aa		4.98	□□□□□ -1.61
TIF11	YMR260C	PSY2	P40164	858 aa		4.98	□□□□□ -1.61
TIF11	YMR260C	MAC1	P35192	417 aa		4.97	□□□□□ -1.61
TIF11	YMR260C	SAF1	P38352	637 aa		4.97	□□□□□ -1.61
TIF11	YMR260C	YLR122C	Q12312	125 aa		4.97	□□□□□ -1.61
TIF11	YMR260C	POL5	P39985	1022 aa	Known RBP	4.96	□□□□□ -1.62
TIF11	YMR260C	REC8	Q12188	680 aa		4.96	□□□□□ -1.62
TIF11	YMR260C	KAE1	P36132	386 aa		4.95	□□□□□ -1.62
TIF11	YMR260C	OMA1	P36163	345 aa		4.95	□□□□□ -1.62
TIF11	YMR260C	ALO1	P54783	526 aa	Known RBP	4.95	□□□□□ -1.62
TIF11	YMR260C	SPO71	Q03868	1245 aa		4.95	□□□□□ -1.62
TIF11	YMR260C	GLO4	Q12320	285 aa		4.95	□□□□□ -1.62
TIF11	YMR260C	UFD2	P54860	961 aa		4.94	□□□□□ -1.62
TIF11	YMR260C	MED7	Q08278	222 aa		4.94	□□□□□ -1.62
TIF11	YMR260C	PYC2	P32327	1180 aa	Known RBP	4.93	□□□□□ -1.62
TIF11	YMR260C	MAE1	P36013	669 aa	Known RBP	4.93	□□□□□ -1.62
TIF11	YMR260C	YKR073C	P36153	106 aa		4.93	□□□□□ -1.62
TIF11	YMR260C	ATG1	P53104	897 aa		4.93	□□□□□ -1.62
TIF11	YMR260C	YNR065C	P53751	1116 aa		4.93	□□□□□ -1.62
TIF11	YMR260C	ELG1	Q12050	791 aa		4.93	□□□□□ -1.62
TIF11	YMR260C	YJR124C	P47159	448 aa		4.92	□□□□□ -1.62
TIF11	YMR260C	NCE103	P53615	221 aa		4.92	□□□□□ -1.62
TIF11	YMR260C	RSC4	Q02206	625 aa		4.92	□□□□□ -1.62
TIF11	YMR260C	HAS1	Q03532	505 aa	Known RBP	4.92	□□□□□ -1.62
TIF11	YMR260C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
TIF11	YMR260C	FET4	P40988	552 aa		4.91	□□□□□ -1.62
TIF11	YMR260C	GLT1	Q12680	2145 aa	Known RBP	4.91	□□□□□ -1.62
TIF11	YMR260C	TRP3	P00937	484 aa		4.9	□□□□□ -1.63
TIF11	YMR260C	CHS2	P14180	963 aa		4.9	□□□□□ -1.63
TIF11	YMR260C	AKR1	P39010	764 aa		4.9	□□□□□ -1.63
TIF11	YMR260C	NEO1	P40527	1151 aa		4.9	□□□□□ -1.63
TIF11	YMR260C	ACF4	P47129	309 aa		4.9	□□□□□ -1.63
TIF11	YMR260C	RPL34A	P87262	121 aa	Predicted RBP	4.9	□□□□□ -1.63
TIF11	YMR260C	CTR9	P89105	1077 aa		4.9	□□□□□ -1.63
TIF11	YMR260C	KAR5	Q04746	504 aa		4.9	□□□□□ -1.63
TIF11	YMR260C	SSA1	P10591	642 aa	Known RBP	4.89	□□□□□ -1.63
TIF11	YMR260C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	RIP-Chip
TIF11	YMR260C	GLO3	P38682	493 aa	Known RBP	4.89	□□□□□ -1.63
TIF11	YMR260C	QDR1	P40475	563 aa		4.89	□□□□□ -1.63
TIF11	YMR260C	SPO74	P45819	413 aa		4.89	□□□□□ -1.63
TIF11	YMR260C	FAR11	P53917	953 aa		4.89	□□□□□ -1.63
TIF11	YMR260C	MSH6	Q03834	1242 aa		4.89	□□□□□ -1.63
TIF11	YMR260C	ERS1	P17261	260 aa		4.88	□□□□□ -1.63
TIF11	YMR260C	MSB1	P21339	1137 aa	Known RBP	4.88	□□□□□ -1.63
TIF11	YMR260C	TOS1	P38288	455 aa		4.88	□□□□□ -1.63
TIF11	YMR260C	RIM11	P38615	370 aa		4.88	□□□□□ -1.63
TIF11	YMR260C	COB	P00163	385 aa		4.87	□□□□□ -1.63
TIF11	YMR260C	PRP5	P21372	849 aa	Predicted RBP	4.87	□□□□□ -1.63
TIF11	YMR260C	NAM7	P30771	971 aa	Known RBP	4.87	□□□□□ -1.63
TIF11	YMR260C	YGR130C	P53278	816 aa		4.87	□□□□□ -1.63
TIF11	YMR260C	TRS120	Q04183	1289 aa		4.87	□□□□□ -1.63
TIF11	YMR260C	YIG1	Q08956	461 aa		4.87	□□□□□ -1.63
TIF11	YMR260C	CTH1	P47976	325 aa		4.86	□□□□□ -1.63
TIF11	YMR260C	GCV1	P48015	400 aa		4.86	□□□□□ -1.63
TIF11	YMR260C	MAG2	Q06436	670 aa	Known RBP	4.86	□□□□□ -1.63
TIF11	YMR260C	BRE4	Q07660	1125 aa		4.86	□□□□□ -1.63
TIF11	YMR260C	YOR223W	Q12015	292 aa		4.86	□□□□□ -1.63
TIF11	YMR260C	CYC7	P00045	113 aa		4.85	□□□□□ -1.63
TIF11	YMR260C	TRL1	P09880	827 aa	Known RBP	4.85	□□□□□ -1.63
TIF11	YMR260C	IRC24	P40580	263 aa		4.85	□□□□□ -1.63
TIF11	YMR260C	SAP155	P43612	1002 aa		4.85	□□□□□ -1.63
TIF11	YMR260C	KIP3	P53086	805 aa	Known RBP	4.85	□□□□□ -1.63
TIF11	YMR260C	CDC55	Q00362	526 aa		4.85	□□□□□ -1.63
TIF11	YMR260C	MNL2	Q12205	849 aa		4.85	□□□□□ -1.63
TIF11	YMR260C	YLL054C	Q12244	843 aa		4.85	□□□□□ -1.63
TIF11	YMR260C	CMR1	Q12510	522 aa	Known RBP	4.85	□□□□□ -1.63
TIF11	YMR260C	NPR1	P22211	790 aa		4.84	□□□□□ -1.63
TIF11	YMR260C	LIP5	P32875	414 aa		4.84	□□□□□ -1.63
TIF11	YMR260C	YNL011C	P53980	444 aa		4.84	□□□□□ -1.63
TIF11	YMR260C	GIC2	Q06648	383 aa		4.84	□□□□□ -1.63
TIF11	YMR260C	HTS1	P07263	546 aa	Known RBP	4.83	□□□□□ -1.64
TIF11	YMR260C	CDC3	P32457	520 aa	Known RBP	4.83	□□□□□ -1.64
TIF11	YMR260C	ELM1	P32801	640 aa		4.83	□□□□□ -1.64
TIF11	YMR260C	BSC2	Q05611	235 aa		4.83	□□□□□ -1.64
TIF11	YMR260C	AOS1	Q06624	347 aa		4.83	□□□□□ -1.64
TIF11	YMR260C	FLP1	P03870	423 aa		4.82	□□□□□ -1.64
TIF11	YMR260C	DUR3	P33413	735 aa		4.81	□□□□□ -1.64
TIF11	YMR260C	GEF1	P37020	779 aa		4.81	□□□□□ -1.64
TIF11	YMR260C	ECM2	P38241	364 aa	Known RBP	4.81	□□□□□ -1.64
TIF11	YMR260C	ARL1	P38116	183 aa	Known RBP	4.8	□□□□□ -1.64
TIF11	YMR260C	MMM1	P41800	426 aa		4.8	□□□□□ -1.64
TIF11	YMR260C	UTP22	P53254	1237 aa	Predicted RBP	4.8	□□□□□ -1.64
TIF11	YMR260C	MEC3	Q02574	474 aa		4.8	□□□□□ -1.64
TIF11	YMR260C	DOT1	Q04089	582 aa	Known RBP	4.8	□□□□□ -1.64
TIF11	YMR260C	YMR074C	Q04773	145 aa		4.8	□□□□□ -1.64
TIF11	YMR260C	PMT7	Q06644	662 aa		4.8	□□□□□ -1.64
TIF11	YMR260C	YOR059C	Q08448	450 aa	Known RBP	4.8	□□□□□ -1.64
TIF11	YMR260C	GPT2	P36148	743 aa		4.79	□□□□□ -1.64
TIF11	YMR260C	ERP5	P38819	212 aa		4.79	□□□□□ -1.64
TIF11	YMR260C	MDJ2	P42834	146 aa		4.79	□□□□□ -1.64
TIF11	YMR260C	CIT3	P43635	486 aa		4.79	□□□□□ -1.64
TIF11	YMR260C	GRS1	P38088	690 aa	Known RBP	4.78	□□□□□ -1.64
TIF11	YMR260C	YHL008C	P38750	627 aa		4.78	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms