RNA–Protein interactions for RNA: YLR018C

POM34, Transcript of Subunit of the transmembrane ring of the nuclear pore complex (NPC), yeastyeast

Gene POM34, Length 900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
POM34YLR018C SPN1Q06505 410 aaPredicted RBP11.55□□□□□ -0.56
POM34YLR018C GLC3P32775 704 aa11.54□□□□□ -0.56
POM34YLR018C RTS1P38903 757 aa11.54□□□□□ -0.56
POM34YLR018C FET4P40988 552 aa11.54□□□□□ -0.56
POM34YLR018C YPL260WQ08977 551 aa11.54□□□□□ -0.56
POM34YLR018C RER2P35196 286 aa11.53□□□□□ -0.56
POM34YLR018C MTC3P53077 123 aa11.53□□□□□ -0.56
POM34YLR018C VPS20Q04272 221 aa11.53□□□□□ -0.56
POM34YLR018C KEL3Q08979 651 aaPredicted RBP11.53□□□□□ -0.56
POM34YLR018C TSR3Q12094 313 aaKnown RBP11.53□□□□□ -0.56
POM34YLR018C AIM7Q12156 149 aa11.53□□□□□ -0.56
POM34YLR018C HPR1P17629 752 aaKnown RBP11.52□□□□□ -0.57
POM34YLR018C IME2P32581 645 aa11.52□□□□□ -0.57
POM34YLR018C YHL050CP38721 697 aa11.52□□□□□ -0.57
POM34YLR018C YJL171CP46992 396 aa11.52□□□□□ -0.57
POM34YLR018C THS1P04801 734 aaKnown RBP11.51□□□□□ -0.57
POM34YLR018C UTP7P40055 554 aaKnown RBP11.51□□□□□ -0.57
POM34YLR018C VID27P40157 782 aa11.51□□□□□ -0.57
POM34YLR018C NPA3P47122 385 aa11.51□□□□□ -0.57
POM34YLR018C YGR117CP53270 476 aa11.51□□□□□ -0.57
POM34YLR018C HDA1P53973 706 aa11.51□□□□□ -0.57
POM34YLR018C TIM50Q02776 476 aa11.51□□□□□ -0.57
POM34YLR018C FLO1P32768 1537 aa11.5□□□□□ -0.57
POM34YLR018C EST2Q06163 884 aa11.5□□□□□ -0.57
POM34YLR018C FBP26P32604 452 aa11.49□□□□□ -0.57
POM34YLR018C RTG2P32608 588 aaKnown RBP11.49□□□□□ -0.57
POM34YLR018C ANP1P32629 500 aa11.49□□□□□ -0.57
POM34YLR018C SIS2P36024 562 aa11.49□□□□□ -0.57
POM34YLR018C PTK2P47116 818 aaKnown RBP11.49□□□□□ -0.57
POM34YLR018C ENT3P47160 408 aa11.49□□□□□ -0.57
POM34YLR018C PCL8Q08966 492 aa11.49□□□□□ -0.57
POM34YLR018C RAD61Q99359 647 aa11.49□□□□□ -0.57
POM34YLR018C CBP1P07252 654 aa11.48□□□□□ -0.57
POM34YLR018C RPL19AP0CX82 189 aaKnown RBP11.48□□□□□ -0.57
POM34YLR018C RPL19BP0CX83 189 aaPredicted RBP11.48□□□□□ -0.57
POM34YLR018C VPS24P36095 224 aaKnown RBP11.48□□□□□ -0.57
POM34YLR018C CTF18P49956 741 aa11.48□□□□□ -0.57
POM34YLR018C YKE2P52553 114 aa11.48□□□□□ -0.57
POM34YLR018C ECM23Q02710 187 aa11.48□□□□□ -0.57
POM34YLR018C YLR278CQ05854 1341 aa11.47□□□□□ -0.57
POM34YLR018C MYO3P36006 1272 aa11.47□□□□□ -0.57
POM34YLR018C DJP1P40564 432 aa11.47□□□□□ -0.57
POM34YLR018C YGL081WP53156 320 aa11.47□□□□□ -0.57
POM34YLR018C MATALPHA2P0CY08 210 aa11.46□□□□□ -0.57
POM34YLR018C HMLALPHA2P0CY09 210 aa11.46□□□□□ -0.57
POM34YLR018C RIT1P23796 513 aa11.46□□□□□ -0.57
POM34YLR018C ADP1P25371 1049 aa11.46□□□□□ -0.57
POM34YLR018C EPL1P43572 832 aa11.46□□□□□ -0.57
POM34YLR018C TFC6Q06339 672 aa11.46□□□□□ -0.57
POM34YLR018C PRO3P32263 286 aaKnown RBP11.45□□□□□ -0.58
POM34YLR018C YBL028CP38202 106 aa11.45□□□□□ -0.58
POM34YLR018C VPS8P39702 1274 aa11.45□□□□□ -0.58
POM34YLR018C EMP47P43555 445 aa11.45□□□□□ -0.58
POM34YLR018C AAD16Q02895 342 aa11.45□□□□□ -0.58
POM34YLR018C LSP1Q12230 341 aaKnown RBP11.45□□□□□ -0.58
POM34YLR018C PMA1P05030 918 aaKnown RBP11.44□□□□□ -0.58
POM34YLR018C BIK1P11709 440 aa11.44□□□□□ -0.58
POM34YLR018C AKR1P39010 764 aa11.44□□□□□ -0.58
POM34YLR018C MSH4P40965 878 aaPredicted RBP11.44□□□□□ -0.58
POM34YLR018C YDL124WQ07551 312 aaKnown RBP11.44□□□□□ -0.58
POM34YLR018C PSK2Q08217 1101 aa11.44□□□□□ -0.58
POM34YLR018C PFK2P16862 959 aaKnown RBP RIP-Chip data11.43□□□□□ -0.58not detected
POM34YLR018C ACE2P21192 770 aa11.43□□□□□ -0.58
POM34YLR018C PRE8P23639 250 aa11.43□□□□□ -0.58
POM34YLR018C YHL017WP38745 532 aa11.43□□□□□ -0.58
POM34YLR018C KEL1P38853 1164 aaKnown RBP11.43□□□□□ -0.58
POM34YLR018C CSM2P40465 213 aa11.43□□□□□ -0.58
POM34YLR018C EAF7P53911 425 aaKnown RBP11.43□□□□□ -0.58
POM34YLR018C PUS5Q06244 254 aa11.43□□□□□ -0.58
POM34YLR018C KIN1P13185 1064 aa11.42□□□□□ -0.58
POM34YLR018C HCA4P20448 770 aaKnown RBP11.42□□□□□ -0.58
POM34YLR018C SRM1P21827 482 aa11.42□□□□□ -0.58
POM34YLR018C RAD53P22216 821 aa11.42□□□□□ -0.58
POM34YLR018C MAK31P23059 88 aa11.42□□□□□ -0.58
POM34YLR018C NIT1P40447 199 aa11.42□□□□□ -0.58
POM34YLR018C BUD6P41697 788 aa11.42□□□□□ -0.58
POM34YLR018C HRQ1Q05549 1077 aa11.41□□□□□ -0.58
POM34YLR018C YLR407WQ06070 228 aa11.41□□□□□ -0.58
POM34YLR018C CPA2P03965 1118 aaKnown RBP11.4□□□□□ -0.58
POM34YLR018C MPH3P0CE00 602 aa11.4□□□□□ -0.58
POM34YLR018C SPT21P35209 758 aa11.4□□□□□ -0.58
POM34YLR018C TTI1P36097 1038 aa11.4□□□□□ -0.58
POM34YLR018C CST26P38226 397 aa11.4□□□□□ -0.58
POM34YLR018C ALG2P43636 503 aa11.4□□□□□ -0.58
POM34YLR018C RPT6Q01939 405 aaKnown RBP11.4□□□□□ -0.58
POM34YLR018C MYO5Q04439 1219 aaKnown RBP11.4□□□□□ -0.58
POM34YLR018C ELG1Q12050 791 aa11.4□□□□□ -0.58
POM34YLR018C CHS3P29465 1165 aa11.39□□□□□ -0.59
POM34YLR018C PRX1P34227 261 aaKnown RBP11.39□□□□□ -0.59
POM34YLR018C MAL31P38156 614 aa11.39□□□□□ -0.59
POM34YLR018C YOR111WQ99210 232 aa11.39□□□□□ -0.59
POM34YLR018C TUB2P02557 457 aaKnown RBP11.38□□□□□ -0.59
POM34YLR018C RPL8BP29453 256 aaKnown RBP11.38□□□□□ -0.59
POM34YLR018C RFC5P38251 354 aa11.38□□□□□ -0.59
POM34YLR018C RPN10P38886 268 aaKnown RBP11.38□□□□□ -0.59
POM34YLR018C BDH2P39713 417 aa11.38□□□□□ -0.59
POM34YLR018C PEX14P53112 341 aa11.38□□□□□ -0.59
POM34YLR018C UBP10P53874 792 aaPredicted RBP11.38□□□□□ -0.59
POM34YLR018C SKG3Q06315 1026 aa11.38□□□□□ -0.59
POM34YLR018C LAP2Q10740 671 aa11.38□□□□□ -0.59
Retrieved 100 of 5,963 RNA–protein pairs in 110.3 ms