RNA–Protein interactions for RNA: YKL166C

TPK3, Transcript of cAMP-dependent protein kinase catalytic subunit, yeast

Gene TPK3, Length 1,197 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPK3	YKL166C	INP54	Q08227	384 aa	Known RBP	5.12	□□□□□ -1.59
TPK3	YKL166C	PDC5	P16467	563 aa	Known RBP	5.11	□□□□□ -1.59
TPK3	YKL166C	KNS1	P32350	737 aa	Predicted RBP	5.11	□□□□□ -1.59
TPK3	YKL166C	YHL008C	P38750	627 aa		5.11	□□□□□ -1.59
TPK3	YKL166C	CIC1	P38779	376 aa	Known RBP	5.11	□□□□□ -1.59
TPK3	YKL166C	YJR107W	P47145	328 aa		5.11	□□□□□ -1.59
TPK3	YKL166C	FUS1	P11710	512 aa		5.1	□□□□□ -1.59
TPK3	YKL166C	DUR3	P33413	735 aa		5.1	□□□□□ -1.59
TPK3	YKL166C	MGE1	P38523	228 aa		5.1	□□□□□ -1.59
TPK3	YKL166C	INP51	P40559	946 aa	Known RBP	5.1	□□□□□ -1.59
TPK3	YKL166C	YJL181W	P46987	611 aa		5.1	□□□□□ -1.59
TPK3	YKL166C	ALD3	P54114	506 aa		5.1	□□□□□ -1.59
TPK3	YKL166C	MSH6	Q03834	1242 aa		5.1	□□□□□ -1.59
TPK3	YKL166C	RPT1	P33299	467 aa	Known RBP	5.09	□□□□□ -1.59
TPK3	YKL166C	BIO5	P53744	561 aa	Known RBP	5.09	□□□□□ -1.59
TPK3	YKL166C	TRK2	P28584	889 aa		5.08	□□□□□ -1.6
TPK3	YKL166C	TFA2	P36145	328 aa		5.08	□□□□□ -1.6
TPK3	YKL166C	ECM2	P38241	364 aa	Known RBP	5.08	□□□□□ -1.6
TPK3	YKL166C	YCS4	Q06156	1176 aa		5.08	□□□□□ -1.6
TPK3	YKL166C	TOS4	Q06266	489 aa		5.08	□□□□□ -1.6
TPK3	YKL166C	GLO4	Q12320	285 aa		5.08	□□□□□ -1.6
TPK3	YKL166C	HVG1	P0CE11	249 aa		5.07	□□□□□ -1.6
TPK3	YKL166C	SEC8	P32855	1065 aa		5.07	□□□□□ -1.6
TPK3	YKL166C	AMN1	P38285	549 aa	Predicted RBP	5.07	□□□□□ -1.6
TPK3	YKL166C	RIM11	P38615	370 aa		5.07	□□□□□ -1.6
TPK3	YKL166C	SAP155	P43612	1002 aa		5.07	□□□□□ -1.6
TPK3	YKL166C	NUT1	P53114	1132 aa		5.07	□□□□□ -1.6
TPK3	YKL166C	SOG2	Q08817	791 aa		5.07	□□□□□ -1.6
TPK3	YKL166C	OXR1	Q08952	273 aa		5.07	□□□□□ -1.6
TPK3	YKL166C	FYV10	P40492	516 aa		5.06	□□□□□ -1.6
TPK3	YKL166C	GIS4	Q04233	774 aa		5.06	□□□□□ -1.6
TPK3	YKL166C	CMR1	Q12510	522 aa	Known RBP	5.06	□□□□□ -1.6
TPK3	YKL166C	HXK1	P04806	485 aa	Known RBP	5.05	□□□□□ -1.6
TPK3	YKL166C	PRP5	P21372	849 aa	Predicted RBP	5.05	□□□□□ -1.6
TPK3	YKL166C	NPR1	P22211	790 aa		5.05	□□□□□ -1.6
TPK3	YKL166C	NAR1	P23503	491 aa	Known RBP	5.05	□□□□□ -1.6
TPK3	YKL166C	PRP40	P33203	583 aa	Known RBP	5.05	□□□□□ -1.6
TPK3	YKL166C	YJR124C	P47159	448 aa		5.05	□□□□□ -1.6
TPK3	YKL166C	MON1	P53129	644 aa		5.05	□□□□□ -1.6
TPK3	YKL166C	SNU71	P53207	620 aa	Known RBP	5.05	□□□□□ -1.6
TPK3	YKL166C	OYE2	Q03558	400 aa	Known RBP	5.05	□□□□□ -1.6
TPK3	YKL166C	DAL4	Q04895	635 aa		5.05	□□□□□ -1.6
TPK3	YKL166C	MCM2	P29469	868 aa		5.04	□□□□□ -1.6
TPK3	YKL166C	MET1	P36150	593 aa		5.04	□□□□□ -1.6
TPK3	YKL166C	RVS167	P39743	482 aa	Known RBP	5.04	□□□□□ -1.6
TPK3	YKL166C	GUP1	P53154	560 aa		5.04	□□□□□ -1.6
TPK3	YKL166C	YGR122W	P53272	402 aa		5.04	□□□□□ -1.6
TPK3	YKL166C	YNR065C	P53751	1116 aa		5.04	□□□□□ -1.6
TPK3	YKL166C	PMT7	Q06644	662 aa		5.04	□□□□□ -1.6
TPK3	YKL166C	PGM2	P37012	569 aa	Known RBP	5.03	□□□□□ -1.6
TPK3	YKL166C	FAA3	P39002	694 aa		5.03	□□□□□ -1.6
TPK3	YKL166C	LSB6	P42951	607 aa		5.03	□□□□□ -1.6
TPK3	YKL166C	SOK2	P53438	785 aa	Predicted RBP	5.03	□□□□□ -1.6
TPK3	YKL166C	YAF9	P53930	226 aa		5.03	□□□□□ -1.6
TPK3	YKL166C	SPR28	Q04921	423 aa		5.03	□□□□□ -1.6
TPK3	YKL166C	SLP1	Q12232	587 aa		5.03	□□□□□ -1.6
TPK3	YKL166C	AI1	P03875	834 aa		5.02	□□□□□ -1.61
TPK3	YKL166C	KAR2	P16474	682 aa	Known RBP	5.02	□□□□□ -1.61
TPK3	YKL166C	MCM5	P29496	775 aa	Known RBP	5.02	□□□□□ -1.61
TPK3	YKL166C	UGA4	P32837	571 aa		5.02	□□□□□ -1.61
TPK3	YKL166C	ALG14	P38242	237 aa		5.02	□□□□□ -1.61
TPK3	YKL166C	RPS26A	P39938	119 aa	Known RBP	5.02	□□□□□ -1.61
TPK3	YKL166C	RPS26B	P39939	119 aa	Known RBP	5.02	□□□□□ -1.61
TPK3	YKL166C	GIP2	P40036	548 aa		5.02	□□□□□ -1.61
TPK3	YKL166C	FET4	P40988	552 aa		5.02	□□□□□ -1.61
TPK3	YKL166C	LEM3	P42838	414 aa		5.02	□□□□□ -1.61
TPK3	YKL166C	ULP1	Q02724	621 aa		5.02	□□□□□ -1.61
TPK3	YKL166C	NHA1	Q99271	985 aa		5.02	□□□□□ -1.61
TPK3	YKL166C	CYC8	P14922	966 aa		5.01	□□□□□ -1.61
TPK3	YKL166C	YPL109C	Q02981	657 aa		5.01	□□□□□ -1.61
TPK3	YKL166C	HAS1	Q03532	505 aa	Known RBP	5.01	□□□□□ -1.61
TPK3	YKL166C	PAM1	P37304	830 aa	Known RBP	5	□□□□□ -1.61
TPK3	YKL166C	NEO1	P40527	1151 aa		5	□□□□□ -1.61
TPK3	YKL166C	TED1	P40533	473 aa		5	□□□□□ -1.61
TPK3	YKL166C	SBE2	P42223	864 aa	Known RBP	5	□□□□□ -1.61
TPK3	YKL166C	YFL066C	P43538	392 aa		5	□□□□□ -1.61
TPK3	YKL166C	TY4B-P	A0A0B7P3V8	1104 aa		4.99	□□□□□ -1.61
TPK3	YKL166C	HTS1	P07263	546 aa	Known RBP	4.99	□□□□□ -1.61
TPK3	YKL166C	RAD2	P07276	1031 aa		4.99	□□□□□ -1.61
TPK3	YKL166C	PAN5	P38787	379 aa		4.99	□□□□□ -1.61
TPK3	YKL166C	RMD1	Q03441	430 aa		4.99	□□□□□ -1.61
TPK3	YKL166C	ADI1	Q03677	179 aa		4.99	□□□□□ -1.61
TPK3	YKL166C	TY4A-H	Q6Q5P6	413 aa		4.99	□□□□□ -1.61
TPK3	YKL166C	PRE9	P23638	258 aa	Known RBP	4.98	□□□□□ -1.61
TPK3	YKL166C	BOI2	P39969	1040 aa		4.98	□□□□□ -1.61
TPK3	YKL166C	YNR014W	P53719	212 aa		4.98	□□□□□ -1.61
TPK3	YKL166C	NOG1	Q02892	647 aa	Known RBP	4.98	□□□□□ -1.61
TPK3	YKL166C	SPO71	Q03868	1245 aa		4.98	□□□□□ -1.61
TPK3	YKL166C	ESF1	Q06344	628 aa	Known RBP	4.98	□□□□□ -1.61
TPK3	YKL166C	THI72	Q08579	599 aa		4.98	□□□□□ -1.61
TPK3	YKL166C	MCD1	Q12158	566 aa		4.98	□□□□□ -1.61
TPK3	YKL166C	POL5	P39985	1022 aa	Known RBP	4.97	□□□□□ -1.61
TPK3	YKL166C	PIC2	P40035	300 aa		4.97	□□□□□ -1.61
TPK3	YKL166C	MRPS18	P42847	217 aa		4.97	□□□□□ -1.61
TPK3	YKL166C	LSB3	P43603	459 aa	Known RBP	4.97	□□□□□ -1.61
TPK3	YKL166C	SVF1	Q05515	481 aa		4.97	□□□□□ -1.61
TPK3	YKL166C	YIG1	Q08956	461 aa		4.97	□□□□□ -1.61
TPK3	YKL166C	SAC7	P17121	654 aa		4.96	□□□□□ -1.62
TPK3	YKL166C	PEP7	P32609	515 aa		4.96	□□□□□ -1.62
TPK3	YKL166C	MDJ1	P35191	511 aa		4.96	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms