RNA–Protein interactions for RNA: YFL008W

SMC1, Transcript of Subunit of the multiprotein cohesin complex, yeastyeast

Gene SMC1, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC1YFL008W YCK2P23292 546 aaKnown RBP2.16□□□□□ -2.06
SMC1YFL008W UBX7P38349 436 aa2.16□□□□□ -2.06
SMC1YFL008W CUS1Q02554 436 aaPredicted RBP2.16□□□□□ -2.06
SMC1YFL008W SRS2P12954 1174 aa2.16□□□□□ -2.06
SMC1YFL008W PNP1Q05788 311 aa2.16□□□□□ -2.06
SMC1YFL008W PHM7Q12252 991 aa2.16□□□□□ -2.06
SMC1YFL008W RIM11P38615 370 aa2.15□□□□□ -2.06
SMC1YFL008W SCD5P34758 872 aa2.15□□□□□ -2.07
SMC1YFL008W ERP5P38819 212 aa2.15□□□□□ -2.07
SMC1YFL008W SKN7P38889 622 aa2.15□□□□□ -2.07
SMC1YFL008W YIL165CP40446 119 aa2.15□□□□□ -2.07
SMC1YFL008W PRK1P40494 810 aa2.15□□□□□ -2.07
SMC1YFL008W STB3Q12427 513 aa2.15□□□□□ -2.07
SMC1YFL008W GPM1P00950 247 aaKnown RBP2.14□□□□□ -2.07
SMC1YFL008W SSA4P22202 642 aaKnown RBP2.14□□□□□ -2.07
SMC1YFL008W SSF1P38789 453 aaPredicted RBP2.14□□□□□ -2.07
SMC1YFL008W QDR2P40474 542 aa2.14□□□□□ -2.07
SMC1YFL008W ATG1P53104 897 aa2.14□□□□□ -2.07
SMC1YFL008W ALD3P54114 506 aa2.14□□□□□ -2.07
SMC1YFL008W YOR296WQ08748 1289 aa2.14□□□□□ -2.07
SMC1YFL008W TIF6Q12522 245 aaKnown RBP2.14□□□□□ -2.07
SMC1YFL008W GEF1P37020 779 aa2.14□□□□□ -2.07
SMC1YFL008W BPT1P14772 1559 aa2.14□□□□□ -2.07
SMC1YFL008W DOP1Q03921 1698 aa2.14□□□□□ -2.07
SMC1YFL008W SGS1P35187 1447 aa2.14□□□□□ -2.07
SMC1YFL008W SSA1P10591 642 aaKnown RBP2.14□□□□□ -2.07
SMC1YFL008W ATE1P16639 503 aa2.14□□□□□ -2.07
SMC1YFL008W PGM1P33401 570 aaKnown RBP2.14□□□□□ -2.07
SMC1YFL008W MRPL16P38064 232 aa2.14□□□□□ -2.07
SMC1YFL008W PHO4P07270 312 aaKnown RBP2.13□□□□□ -2.07
SMC1YFL008W NAR1P23503 491 aaKnown RBP2.13□□□□□ -2.07
SMC1YFL008W NTA1P40354 457 aa2.13□□□□□ -2.07
SMC1YFL008W GNP1P48813 663 aa2.13□□□□□ -2.07
SMC1YFL008W BIO5P53744 561 aaKnown RBP2.13□□□□□ -2.07
SMC1YFL008W DNF1P32660 1571 aa2.13□□□□□ -2.07
SMC1YFL008W PDC5P16467 563 aaKnown RBP2.13□□□□□ -2.07
SMC1YFL008W ISC10P32645 267 aa2.13□□□□□ -2.07
SMC1YFL008W APM2P38700 605 aa2.13□□□□□ -2.07
SMC1YFL008W NUT2Q06213 157 aa2.13□□□□□ -2.07
SMC1YFL008W KAP122P32767 1081 aa2.13□□□□□ -2.07
SMC1YFL008W SEA4P38164 1038 aa2.13□□□□□ -2.07
SMC1YFL008W ATG3P40344 310 aa2.13□□□□□ -2.07
SMC1YFL008W MSH6Q03834 1242 aa2.13□□□□□ -2.07
SMC1YFL008W DPH6Q12429 685 aa2.12□□□□□ -2.07
SMC1YFL008W CMR1Q12510 522 aaKnown RBP2.12□□□□□ -2.07
SMC1YFL008W KNS1P32350 737 aaPredicted RBP2.12□□□□□ -2.07
SMC1YFL008W SBE2P42223 864 aaKnown RBP2.12□□□□□ -2.07
SMC1YFL008W ACF4P47129 309 aa2.12□□□□□ -2.07
SMC1YFL008W RDH54P38086 958 aa2.12□□□□□ -2.07
SMC1YFL008W QDR1P40475 563 aa2.12□□□□□ -2.07
SMC1YFL008W PDR12Q02785 1511 aa2.11□□□□□ -2.07
SMC1YFL008W UGA4P32837 571 aa2.11□□□□□ -2.07
SMC1YFL008W LDH1P38139 375 aa2.11□□□□□ -2.07
SMC1YFL008W YFL034WP43564 1073 aa2.11□□□□□ -2.07
SMC1YFL008W YNR065CP53751 1116 aa2.11□□□□□ -2.07
SMC1YFL008W GIS4Q04233 774 aa2.11□□□□□ -2.07
SMC1YFL008W HXT13P39924 564 aa2.11□□□□□ -2.07
SMC1YFL008W HXT17P53631 564 aa2.11□□□□□ -2.07
SMC1YFL008W HXT15P54854 567 aa2.11□□□□□ -2.07
SMC1YFL008W GIP1P38229 639 aa2.11□□□□□ -2.07
SMC1YFL008W INP51P40559 946 aaKnown RBP2.11□□□□□ -2.07
SMC1YFL008W SSN2P38931 1420 aa2.1□□□□□ -2.07
SMC1YFL008W AI1P03875 834 aa2.1□□□□□ -2.07
SMC1YFL008W PYC2P32327 1180 aaKnown RBP2.1□□□□□ -2.07
SMC1YFL008W HXT8P40886 569 aa2.1□□□□□ -2.07
SMC1YFL008W TRS120Q04183 1289 aa2.1□□□□□ -2.07
SMC1YFL008W YDR215CQ12240 137 aa2.1□□□□□ -2.07
SMC1YFL008W DAT1P13483 248 aaKnown RBP2.1□□□□□ -2.07
SMC1YFL008W TAT2P38967 592 aa2.1□□□□□ -2.07
SMC1YFL008W IPL1P38991 367 aa2.1□□□□□ -2.07
SMC1YFL008W POL5P39985 1022 aaKnown RBP2.1□□□□□ -2.07
SMC1YFL008W DAK2P43550 591 aa2.1□□□□□ -2.07
SMC1YFL008W GLO4Q12320 285 aa2.1□□□□□ -2.07
SMC1YFL008W DNF2Q12675 1612 aa2.1□□□□□ -2.07
SMC1YFL008W ARO1P08566 1588 aaKnown RBP2.1□□□□□ -2.07
SMC1YFL008W VAN1P23642 535 aa2.1□□□□□ -2.07
SMC1YFL008W DUT1P33317 147 aa2.1□□□□□ -2.07
SMC1YFL008W PPX1P38698 397 aa2.1□□□□□ -2.07
SMC1YFL008W KRE33P53914 1056 aaKnown RBP2.1□□□□□ -2.07
SMC1YFL008W ADE12P80210 433 aaKnown RBP2.1□□□□□ -2.07
SMC1YFL008W PUN1Q06991 263 aa2.1□□□□□ -2.07
SMC1YFL008W POL1P13382 1468 aa2.09□□□□□ -2.07
SMC1YFL008W BUD4P47136 1447 aa2.09□□□□□ -2.07
SMC1YFL008W CCT8P47079 568 aaKnown RBP2.09□□□□□ -2.07
SMC1YFL008W YJR107WP47145 328 aa2.09□□□□□ -2.07
SMC1YFL008W SOG2Q08817 791 aa2.09□□□□□ -2.07
SMC1YFL008W MSC6Q08818 692 aaKnown RBP2.09□□□□□ -2.07
SMC1YFL008W SLN1P39928 1220 aaPredicted RBP2.09□□□□□ -2.08
SMC1YFL008W PIC2P40035 300 aa2.09□□□□□ -2.08
SMC1YFL008W PSY2P40164 858 aa2.09□□□□□ -2.08
SMC1YFL008W CDC55Q00362 526 aa2.09□□□□□ -2.08
SMC1YFL008W NOG1Q02892 647 aaKnown RBP2.09□□□□□ -2.08
SMC1YFL008W YPR053CQ6Q5F3 151 aa2.09□□□□□ -2.08
SMC1YFL008W YBL113CQ7M4S9 792 aa2.09□□□□□ -2.08
SMC1YFL008W TY3B-GQ99315 1547 aa2.09□□□□□ -2.08
SMC1YFL008W FLP1P03870 423 aa2.09□□□□□ -2.08
SMC1YFL008W HXK1P04806 485 aaKnown RBP2.09□□□□□ -2.08
SMC1YFL008W TY1A-LR4P0C2I8 440 aaKnown RBP2.09□□□□□ -2.08
SMC1YFL008W TY1A-DR6P0CX70 440 aa2.09□□□□□ -2.08
SMC1YFL008W TY1A-ER1P0CX71 440 aa2.09□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 35.7 ms