RNA–Protein interactions for RNA: YER123W

YCK3, Transcript of Palmitoylated vacuolar membrane-localized casein kinase I isoform, yeast

Gene YCK3, Length 1,575 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCK3	YER123W	TIF1	P10081	395 aa	Known RBP	4.2	□□□□□ -1.74
YCK3	YER123W	YHL008C	P38750	627 aa		4.2	□□□□□ -1.74
YCK3	YER123W	ROM1	P53046	1155 aa		4.2	□□□□□ -1.74
YCK3	YER123W	SOG2	Q08817	791 aa		4.2	□□□□□ -1.74
YCK3	YER123W	LDH1	P38139	375 aa		4.19	□□□□□ -1.74
YCK3	YER123W	BIO5	P53744	561 aa	Known RBP	4.19	□□□□□ -1.74
YCK3	YER123W	SPO71	Q03868	1245 aa		4.19	□□□□□ -1.74
YCK3	YER123W	ELG1	Q12050	791 aa		4.19	□□□□□ -1.74
YCK3	YER123W	CDA2	Q06703	312 aa		4.19	□□□□□ -1.74
YCK3	YER123W	RPL34B	P40525	121 aa	Known RBP	4.18	□□□□□ -1.74
YCK3	YER123W	TRS33	Q99394	268 aa		4.18	□□□□□ -1.74
YCK3	YER123W	TSA1	P34760	196 aa	Known RBP	4.17	□□□□□ -1.74
YCK3	YER123W	BIM1	P40013	344 aa		4.17	□□□□□ -1.74
YCK3	YER123W	ATG32	P40458	529 aa		4.17	□□□□□ -1.74
YCK3	YER123W	MMM1	P41800	426 aa		4.16	□□□□□ -1.74
YCK3	YER123W	KIP3	P53086	805 aa	Known RBP	4.16	□□□□□ -1.74
YCK3	YER123W	HDA2	Q06629	674 aa		4.16	□□□□□ -1.74
YCK3	YER123W	GAL2	P13181	574 aa		4.15	□□□□□ -1.74
YCK3	YER123W	HSP78	P33416	811 aa		4.15	□□□□□ -1.74
YCK3	YER123W	TFA2	P36145	328 aa		4.15	□□□□□ -1.74
YCK3	YER123W	CIT3	P43635	486 aa		4.15	□□□□□ -1.74
YCK3	YER123W	YNR065C	P53751	1116 aa		4.15	□□□□□ -1.74
YCK3	YER123W	FOX2	Q02207	900 aa	Known RBP	4.15	□□□□□ -1.74
YCK3	YER123W	ERS1	P17261	260 aa		4.14	□□□□□ -1.75
YCK3	YER123W	THI80	P35202	319 aa		4.14	□□□□□ -1.75
YCK3	YER123W	YBR287W	P38355	427 aa		4.14	□□□□□ -1.75
YCK3	YER123W	ALD3	P54114	506 aa		4.14	□□□□□ -1.75
YCK3	YER123W	FUS1	P11710	512 aa		4.14	□□□□□ -1.75
YCK3	YER123W	SUV3	P32580	737 aa		4.14	□□□□□ -1.75
YCK3	YER123W	SIS2	P36024	562 aa		4.14	□□□□□ -1.75
YCK3	YER123W	YOR059C	Q08448	450 aa	Known RBP	4.14	□□□□□ -1.75
YCK3	YER123W	MSN1	P22148	382 aa		4.13	□□□□□ -1.75
YCK3	YER123W	NEO1	P40527	1151 aa		4.13	□□□□□ -1.75
YCK3	YER123W	EMG1	Q06287	252 aa	Known RBP	4.13	□□□□□ -1.75
YCK3	YER123W	WHI3	P34761	661 aa	Known RBP	4.12	□□□□□ -1.75
YCK3	YER123W	BOI1	P38041	980 aa	Known RBP	4.12	□□□□□ -1.75
YCK3	YER123W	FAR11	P53917	953 aa		4.12	□□□□□ -1.75
YCK3	YER123W	FLR1	P38124	548 aa		4.11	□□□□□ -1.75
YCK3	YER123W	YBR197C	P38306	217 aa		4.11	□□□□□ -1.75
YCK3	YER123W	RCM1	P53972	490 aa		4.11	□□□□□ -1.75
YCK3	YER123W	PRP6	P19735	899 aa	Predicted RBP	4.1	□□□□□ -1.75
YCK3	YER123W	MSH6	Q03834	1242 aa		4.1	□□□□□ -1.75
YCK3	YER123W	YOR223W	Q12015	292 aa		4.1	□□□□□ -1.75
YCK3	YER123W	AIM46	P38885	310 aa		4.1	□□□□□ -1.75
YCK3	YER123W	FIR1	P40020	876 aa		4.1	□□□□□ -1.75
YCK3	YER123W	YJR124C	P47159	448 aa		4.08	□□□□□ -1.76
YCK3	YER123W	HAS1	Q03532	505 aa	Known RBP	4.08	□□□□□ -1.76
YCK3	YER123W	ADP1	P25371	1049 aa		4.07	□□□□□ -1.76
YCK3	YER123W	GPT2	P36148	743 aa		4.07	□□□□□ -1.76
YCK3	YER123W	OYE3	P41816	400 aa	Predicted RBP	4.07	□□□□□ -1.76
YCK3	YER123W	ORC3	P54790	616 aa		4.07	□□□□□ -1.76
YCK3	YER123W	GSF2	Q04697	403 aa	Known RBP	4.07	□□□□□ -1.76
YCK3	YER123W	ISC10	P32645	267 aa		4.06	□□□□□ -1.76
YCK3	YER123W	YMR074C	Q04773	145 aa		4.06	□□□□□ -1.76
YCK3	YER123W	HVG1	P0CE11	249 aa		4.06	□□□□□ -1.76
YCK3	YER123W	TAD3	Q9URQ3	322 aa		4.06	□□□□□ -1.76
YCK3	YER123W	HXT8	P40886	569 aa		4.04	□□□□□ -1.76
YCK3	YER123W	FET4	P40988	552 aa		4.04	□□□□□ -1.76
YCK3	YER123W	HGH1	P48362	394 aa	Known RBP	4.04	□□□□□ -1.76
YCK3	YER123W	YLL054C	Q12244	843 aa		4.04	□□□□□ -1.76
YCK3	YER123W	AIM3	P38266	947 aa	Known RBP	4.03	□□□□□ -1.76
YCK3	YER123W	ALD4	P46367	519 aa	Known RBP	4.03	□□□□□ -1.76
YCK3	YER123W	ECM23	Q02710	187 aa		4.03	□□□□□ -1.76
YCK3	YER123W	DOT1	Q04089	582 aa	Known RBP	4.03	□□□□□ -1.76
YCK3	YER123W	GLO4	Q12320	285 aa		4.02	□□□□□ -1.77
YCK3	YER123W	TGL4	P36165	910 aa		4.02	□□□□□ -1.77
YCK3	YER123W	RIM8	P53179	542 aa		4.02	□□□□□ -1.77
YCK3	YER123W	SSY1	Q03770	852 aa		4.02	□□□□□ -1.77
YCK3	YER123W	RGD2	P43556	714 aa		4.01	□□□□□ -1.77
YCK3	YER123W	TRE1	Q08919	783 aa		4.01	□□□□□ -1.77
YCK3	YER123W	RPS4A	P0CX35	261 aa	Known RBP	4	□□□□□ -1.77
YCK3	YER123W	RPS4B	P0CX36	261 aa	Known RBP	4	□□□□□ -1.77
YCK3	YER123W	NFS1	P25374	497 aa		4	□□□□□ -1.77
YCK3	YER123W	UBX7	P38349	436 aa		4	□□□□□ -1.77
YCK3	YER123W	NTA1	P40354	457 aa		3.99	□□□□□ -1.77
YCK3	YER123W	MRPL22	P53881	309 aa		3.99	□□□□□ -1.77
YCK3	YER123W	LPX1	Q12405	387 aa	Known RBP	3.99	□□□□□ -1.77
YCK3	YER123W	ABZ1	P37254	787 aa	Predicted RBP	3.98	□□□□□ -1.77
YCK3	YER123W	GCV1	P48015	400 aa		3.98	□□□□□ -1.77
YCK3	YER123W	PRO1	P32264	428 aa		3.97	□□□□□ -1.77
YCK3	YER123W	YPT53	P36019	220 aa		3.97	□□□□□ -1.77
YCK3	YER123W	PUN1	Q06991	263 aa		3.97	□□□□□ -1.77
YCK3	YER123W	PEX7	P39108	375 aa		3.97	□□□□□ -1.77
YCK3	YER123W	ALT1	P52893	592 aa		3.97	□□□□□ -1.77
YCK3	YER123W	PUF6	Q04373	656 aa	Known RBP	3.97	□□□□□ -1.77
YCK3	YER123W	SOD2	P00447	233 aa		3.96	□□□□□ -1.78
YCK3	YER123W	YVC1	Q12324	675 aa		3.96	□□□□□ -1.78
YCK3	YER123W	PYC2	P32327	1180 aa	Known RBP	3.95	□□□□□ -1.78
YCK3	YER123W	TOD6	P34219	525 aa		3.95	□□□□□ -1.78
YCK3	YER123W	RAD55	P38953	406 aa		3.95	□□□□□ -1.78
YCK3	YER123W	MSH4	P40965	878 aa	Predicted RBP	3.95	□□□□□ -1.78
YCK3	YER123W	PNS1	Q12412	539 aa		3.95	□□□□□ -1.78
YCK3	YER123W	TIF6	Q12522	245 aa	Known RBP	3.95	□□□□□ -1.78
YCK3	YER123W	TUB2	P02557	457 aa	Known RBP	3.94	□□□□□ -1.78
YCK3	YER123W	IRS4	P36115	615 aa	Known RBP	3.94	□□□□□ -1.78
YCK3	YER123W	YIG1	Q08956	461 aa		3.94	□□□□□ -1.78
YCK3	YER123W	YDL177C	Q12257	170 aa		3.94	□□□□□ -1.78
YCK3	YER123W	SRS2	P12954	1174 aa		3.93	□□□□□ -1.78
YCK3	YER123W	PSY2	P40164	858 aa		3.93	□□□□□ -1.78
YCK3	YER123W	SUT1	P53032	299 aa	Known RBP	3.93	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 71.3 ms