RNA–Protein interactions for RNA: YER018C

SPC25, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene SPC25, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC25YER018C SPO22P40511 975 aa12.63□□□□□ -0.39
SPC25YER018C UFD2P54860 961 aa12.63□□□□□ -0.39
SPC25YER018C RPS15Q01855 142 aaKnown RBP12.63□□□□□ -0.39
SPC25YER018C SPN1Q06505 410 aaPredicted RBP12.63□□□□□ -0.39
SPC25YER018C SRS2P12954 1174 aa12.62□□□□□ -0.39
SPC25YER018C RTG2P32608 588 aaKnown RBP12.62□□□□□ -0.39
SPC25YER018C OPY1P38271 328 aa12.62□□□□□ -0.39
SPC25YER018C RTS1P38903 757 aa12.62□□□□□ -0.39
SPC25YER018C MTC3P53077 123 aa12.62□□□□□ -0.39
SPC25YER018C ARP5P53946 755 aa12.62□□□□□ -0.39
SPC25YER018C KEL3Q08979 651 aaPredicted RBP12.62□□□□□ -0.39
SPC25YER018C CRG1P38892 291 aaRIP-Chip data12.61□□□□□ -0.39not detected
SPC25YER018C VID28P40547 921 aa12.61□□□□□ -0.39
SPC25YER018C YJL171CP46992 396 aa12.61□□□□□ -0.39
SPC25YER018C YGR117CP53270 476 aa12.61□□□□□ -0.39
SPC25YER018C RER2P35196 286 aa12.6□□□□□ -0.39
SPC25YER018C GSC2P40989 1895 aa12.59□□□□□ -0.39
SPC25YER018C CBP1P07252 654 aa12.59□□□□□ -0.39
SPC25YER018C SIS2P36024 562 aa12.59□□□□□ -0.39
SPC25YER018C YHL050CP38721 697 aa12.59□□□□□ -0.39
SPC25YER018C UTP7P40055 554 aaKnown RBP12.59□□□□□ -0.39
SPC25YER018C YLR278CQ05854 1341 aa12.59□□□□□ -0.39
SPC25YER018C VID27P40157 782 aa12.58□□□□□ -0.4
SPC25YER018C PCL8Q08966 492 aa12.58□□□□□ -0.4
SPC25YER018C EMP47P43555 445 aa12.57□□□□□ -0.4
SPC25YER018C AAD16Q02895 342 aa12.57□□□□□ -0.4
SPC25YER018C VPS20Q04272 221 aa12.57□□□□□ -0.4
SPC25YER018C TSR3Q12094 313 aaKnown RBP12.57□□□□□ -0.4
SPC25YER018C RAD61Q99359 647 aa12.57□□□□□ -0.4
SPC25YER018C ADP1P25371 1049 aa12.56□□□□□ -0.4
SPC25YER018C ANP1P32629 500 aa12.56□□□□□ -0.4
SPC25YER018C EST2Q06163 884 aa12.56□□□□□ -0.4
SPC25YER018C YBL028CP38202 106 aa12.55□□□□□ -0.4
SPC25YER018C HDA1P53973 706 aa12.55□□□□□ -0.4
SPC25YER018C PUS5Q06244 254 aa12.55□□□□□ -0.4
SPC25YER018C PMA1P05030 918 aaKnown RBP12.54□□□□□ -0.4
SPC25YER018C RIT1P23796 513 aa12.54□□□□□ -0.4
SPC25YER018C FBP26P32604 452 aa12.54□□□□□ -0.4
SPC25YER018C MSH4P40965 878 aaPredicted RBP12.54□□□□□ -0.4
SPC25YER018C ENT3P47160 408 aa12.54□□□□□ -0.4
SPC25YER018C YKE2P52553 114 aa12.54□□□□□ -0.4
SPC25YER018C RPL19AP0CX82 189 aaKnown RBP12.53□□□□□ -0.4
SPC25YER018C RPL19BP0CX83 189 aaPredicted RBP12.53□□□□□ -0.4
SPC25YER018C MYO3P36006 1272 aa12.53□□□□□ -0.4
SPC25YER018C VPS8P39702 1274 aa12.53□□□□□ -0.4
SPC25YER018C NIT1P40447 199 aa12.53□□□□□ -0.4
SPC25YER018C PTK2P47116 818 aaKnown RBP12.53□□□□□ -0.4
SPC25YER018C NPA3P47122 385 aa12.53□□□□□ -0.4
SPC25YER018C YDL124WQ07551 312 aaKnown RBP12.53□□□□□ -0.4
SPC25YER018C CTF18P49956 741 aa12.52□□□□□ -0.41
SPC25YER018C RAD53P22216 821 aa12.51□□□□□ -0.41
SPC25YER018C PRE8P23639 250 aa12.51□□□□□ -0.41
SPC25YER018C PRO3P32263 286 aaKnown RBP12.51□□□□□ -0.41
SPC25YER018C KEL1P38853 1164 aaKnown RBP12.51□□□□□ -0.41
SPC25YER018C TFC6Q06339 672 aa12.51□□□□□ -0.41
SPC25YER018C SRM1P21827 482 aa12.5□□□□□ -0.41
SPC25YER018C EPL1P43572 832 aa12.5□□□□□ -0.41
SPC25YER018C YGL081WP53156 320 aa12.5□□□□□ -0.41
SPC25YER018C ECM23Q02710 187 aa12.5□□□□□ -0.41
SPC25YER018C MPH3P0CE00 602 aa12.49□□□□□ -0.41
SPC25YER018C MATALPHA2P0CY08 210 aa12.49□□□□□ -0.41
SPC25YER018C HMLALPHA2P0CY09 210 aa12.49□□□□□ -0.41
SPC25YER018C KIN1P13185 1064 aa12.49□□□□□ -0.41
SPC25YER018C PFK2P16862 959 aaKnown RBP RIP-Chip data12.49□□□□□ -0.41not detected
SPC25YER018C ACE2P21192 770 aa12.49□□□□□ -0.41
SPC25YER018C IME2P32581 645 aa12.49□□□□□ -0.41
SPC25YER018C SPT21P35209 758 aa12.49□□□□□ -0.41
SPC25YER018C VPS24P36095 224 aaKnown RBP12.49□□□□□ -0.41
SPC25YER018C CST26P38226 397 aa12.49□□□□□ -0.41
SPC25YER018C VHR2P40041 505 aa12.49□□□□□ -0.41
SPC25YER018C PSK2Q08217 1101 aa12.49□□□□□ -0.41
SPC25YER018C BIK1P11709 440 aa12.48□□□□□ -0.41
SPC25YER018C GAL2P13181 574 aa12.48□□□□□ -0.41
SPC25YER018C MAK31P23059 88 aa12.48□□□□□ -0.41
SPC25YER018C AKR1P39010 764 aa12.48□□□□□ -0.41
SPC25YER018C PEA2P40091 420 aa12.48□□□□□ -0.41
SPC25YER018C CSM2P40465 213 aa12.48□□□□□ -0.41
SPC25YER018C ALG2P43636 503 aa12.48□□□□□ -0.41
SPC25YER018C HCA4P20448 770 aaKnown RBP12.47□□□□□ -0.41
SPC25YER018C TPS3P38426 1054 aaKnown RBP12.47□□□□□ -0.41
SPC25YER018C YHL017WP38745 532 aa12.47□□□□□ -0.41
SPC25YER018C BUD6P41697 788 aa12.47□□□□□ -0.41
SPC25YER018C PEX21P50091 288 aa12.47□□□□□ -0.41
SPC25YER018C SNU71P53207 620 aaKnown RBP12.47□□□□□ -0.41
SPC25YER018C CWC15Q03772 175 aaKnown RBP12.47□□□□□ -0.41
SPC25YER018C LSP1Q12230 341 aaKnown RBP12.47□□□□□ -0.41
SPC25YER018C TUB2P02557 457 aaKnown RBP12.46□□□□□ -0.41
SPC25YER018C CHS3P29465 1165 aa12.46□□□□□ -0.41
SPC25YER018C TTI1P36097 1038 aa12.46□□□□□ -0.41
SPC25YER018C DJP1P40564 432 aa12.46□□□□□ -0.41
SPC25YER018C RPT6Q01939 405 aaKnown RBP12.46□□□□□ -0.41
SPC25YER018C LAP2Q10740 671 aa12.46□□□□□ -0.41
SPC25YER018C RPL8BP29453 256 aaKnown RBP12.45□□□□□ -0.42
SPC25YER018C MAL31P38156 614 aa12.45□□□□□ -0.42
SPC25YER018C UBP10P53874 792 aaPredicted RBP12.45□□□□□ -0.42
SPC25YER018C EAF7P53911 425 aaKnown RBP12.45□□□□□ -0.42
SPC25YER018C MYO5Q04439 1219 aaKnown RBP12.45□□□□□ -0.42
SPC25YER018C SKG3Q06315 1026 aa12.45□□□□□ -0.42
SPC25YER018C CSR2Q12734 1121 aa12.45□□□□□ -0.42
SPC25YER018C FOL1P53848 824 aa12.44□□□□□ -0.42
Retrieved 100 of 5,963 RNA–protein pairs in 56.1 ms