RNA–Protein interactions for RNA: YEL013W

VAC8, Transcript of Phosphorylated and palmitoylated vacuolar membrane protein, yeast

Gene VAC8, Length 1,737 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAC8	YEL013W	SRS2	P12954	1174 aa		4.77	□□□□□ -1.65
VAC8	YEL013W	MLF3	P32047	452 aa		4.77	□□□□□ -1.65
VAC8	YEL013W	SUV3	P32580	737 aa		4.77	□□□□□ -1.65
VAC8	YEL013W	ALD4	P46367	519 aa	Known RBP	4.77	□□□□□ -1.65
VAC8	YEL013W	PDC6	P26263	563 aa	Known RBP	4.77	□□□□□ -1.65
VAC8	YEL013W	SCD5	P34758	872 aa		4.77	□□□□□ -1.65
VAC8	YEL013W	PNP1	Q05788	311 aa		4.77	□□□□□ -1.65
VAC8	YEL013W	PSH1	Q12161	406 aa		4.77	□□□□□ -1.65
VAC8	YEL013W	VMR1	P38735	1592 aa		4.76	□□□□□ -1.65
VAC8	YEL013W	FOX2	Q02207	900 aa	Known RBP	4.76	□□□□□ -1.65
VAC8	YEL013W	GEF1	P37020	779 aa		4.75	□□□□□ -1.65
VAC8	YEL013W	MRPL16	P38064	232 aa		4.75	□□□□□ -1.65
VAC8	YEL013W	YBR197C	P38306	217 aa		4.75	□□□□□ -1.65
VAC8	YEL013W	HXT5	P38695	592 aa		4.75	□□□□□ -1.65
VAC8	YEL013W	CUZ1	P53899	274 aa		4.75	□□□□□ -1.65
VAC8	YEL013W	YPL062W	Q02781	134 aa		4.75	□□□□□ -1.65
VAC8	YEL013W	YMR265C	Q03508	461 aa	Known RBP	4.75	□□□□□ -1.65
VAC8	YEL013W	RRN6	P32786	894 aa		4.75	□□□□□ -1.65
VAC8	YEL013W	MTO1	P53070	669 aa		4.75	□□□□□ -1.65
VAC8	YEL013W	CAB1	Q04430	367 aa		4.75	□□□□□ -1.65
VAC8	YEL013W	UTP4	Q06679	776 aa	Known RBP	4.75	□□□□□ -1.65
VAC8	YEL013W	CCP1	P00431	361 aa		4.74	□□□□□ -1.65
VAC8	YEL013W	FUR4	P05316	633 aa	Known RBP	4.74	□□□□□ -1.65
VAC8	YEL013W	DIT1	P21623	536 aa		4.74	□□□□□ -1.65
VAC8	YEL013W	KRE33	P53914	1056 aa	Known RBP	4.74	□□□□□ -1.65
VAC8	YEL013W	BCK1	Q01389	1478 aa		4.73	□□□□□ -1.65
VAC8	YEL013W	ISC10	P32645	267 aa		4.73	□□□□□ -1.65
VAC8	YEL013W	TPS3	P38426	1054 aa	Known RBP	4.73	□□□□□ -1.65
VAC8	YEL013W	ADE12	P80210	433 aa	Known RBP	4.73	□□□□□ -1.65
VAC8	YEL013W	LEU1	P07264	779 aa	Known RBP	4.72	□□□□□ -1.65
VAC8	YEL013W	KAP122	P32767	1081 aa		4.72	□□□□□ -1.65
VAC8	YEL013W	CEM1	P39525	442 aa		4.72	□□□□□ -1.65
VAC8	YEL013W	HPF1	Q05164	967 aa		4.72	□□□□□ -1.65
VAC8	YEL013W	STB3	Q12427	513 aa		4.72	□□□□□ -1.65
VAC8	YEL013W	MRPL33	P20084	86 aa		4.72	□□□□□ -1.65
VAC8	YEL013W	CDC3	P32457	520 aa	Known RBP	4.72	□□□□□ -1.65
VAC8	YEL013W	ALD2	P47771	506 aa		4.72	□□□□□ -1.65
VAC8	YEL013W	YGR035C	P53222	116 aa		4.72	□□□□□ -1.65
VAC8	YEL013W	RGP1	P16664	663 aa		4.71	□□□□□ -1.66
VAC8	YEL013W	FPS1	P23900	669 aa		4.71	□□□□□ -1.66
VAC8	YEL013W	VMA3	P25515	160 aa		4.71	□□□□□ -1.66
VAC8	YEL013W	QDR2	P40474	542 aa		4.71	□□□□□ -1.66
VAC8	YEL013W	SPR3	P41901	512 aa		4.71	□□□□□ -1.66
VAC8	YEL013W	KAR5	Q04746	504 aa		4.71	□□□□□ -1.66
VAC8	YEL013W	RPP1A	P05318	106 aa	Predicted RBP	4.7	□□□□□ -1.66
VAC8	YEL013W	TYS1	P36421	394 aa	Known RBP	4.7	□□□□□ -1.66
VAC8	YEL013W	LYS5	P50113	272 aa		4.7	□□□□□ -1.66
VAC8	YEL013W	PDR11	P40550	1411 aa		4.7	□□□□□ -1.66
VAC8	YEL013W	LDH1	P38139	375 aa		4.69	□□□□□ -1.66
VAC8	YEL013W	DYS1	P38791	387 aa		4.69	□□□□□ -1.66
VAC8	YEL013W	SYT1	Q06836	1226 aa		4.69	□□□□□ -1.66
VAC8	YEL013W	CUS1	Q02554	436 aa	Predicted RBP	4.68	□□□□□ -1.66
VAC8	YEL013W	HAT1	Q12341	374 aa		4.68	□□□□□ -1.66
VAC8	YEL013W	DPH6	Q12429	685 aa		4.68	□□□□□ -1.66
VAC8	YEL013W	YDR461C-A	Q2V2P7	80 aa		4.68	□□□□□ -1.66
VAC8	YEL013W	TRK2	P28584	889 aa		4.67	□□□□□ -1.66
VAC8	YEL013W	BOL3	P39724	118 aa		4.67	□□□□□ -1.66
VAC8	YEL013W	FIR1	P40020	876 aa		4.67	□□□□□ -1.66
VAC8	YEL013W	NCL1	P38205	684 aa	Known RBP	4.66	□□□□□ -1.66
VAC8	YEL013W	GLO3	P38682	493 aa	Known RBP	4.66	□□□□□ -1.66
VAC8	YEL013W	APM2	P38700	605 aa		4.66	□□□□□ -1.66
VAC8	YEL013W	LSO1	Q3E827	93 aa		4.66	□□□□□ -1.66
VAC8	YEL013W	RPC31	P17890	251 aa		4.66	□□□□□ -1.66
VAC8	YEL013W	SKP1	P52286	194 aa		4.66	□□□□□ -1.66
VAC8	YEL013W	SUT1	P53032	299 aa	Known RBP	4.66	□□□□□ -1.66
VAC8	YEL013W	BOI1	P38041	980 aa	Known RBP	4.65	□□□□□ -1.67
VAC8	YEL013W	GIP1	P38229	639 aa		4.65	□□□□□ -1.67
VAC8	YEL013W	YBR287W	P38355	427 aa		4.65	□□□□□ -1.67
VAC8	YEL013W	HXT8	P40886	569 aa		4.65	□□□□□ -1.67
VAC8	YEL013W	GEA1	P47102	1408 aa	Predicted RBP	4.65	□□□□□ -1.67
VAC8	YEL013W	ENT1	Q12518	454 aa		4.65	□□□□□ -1.67
VAC8	YEL013W	ISW1	P38144	1129 aa		4.64	□□□□□ -1.67
VAC8	YEL013W	QDR1	P40475	563 aa		4.64	□□□□□ -1.67
VAC8	YEL013W	JJJ3	P47138	172 aa		4.64	□□□□□ -1.67
VAC8	YEL013W	MSN1	P22148	382 aa		4.63	□□□□□ -1.67
VAC8	YEL013W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
VAC8	YEL013W	YNR040W	P53736	256 aa		4.63	□□□□□ -1.67
VAC8	YEL013W	HEH2	Q03281	663 aa		4.63	□□□□□ -1.67
VAC8	YEL013W	YOR296W	Q08748	1289 aa		4.63	□□□□□ -1.67
VAC8	YEL013W	CFT1	Q06632	1357 aa	Known RBP	4.63	□□□□□ -1.67
VAC8	YEL013W	BSD2	P38356	321 aa		4.63	□□□□□ -1.67
VAC8	YEL013W	IMH1	Q06704	911 aa	Known RBP	4.63	□□□□□ -1.67
VAC8	YEL013W	APC11	Q12157	165 aa		4.63	□□□□□ -1.67
VAC8	YEL013W	YBL113C	Q7M4S9	792 aa		4.63	□□□□□ -1.67
VAC8	YEL013W	PDR5	P33302	1511 aa	Known RBP	4.62	□□□□□ -1.67
VAC8	YEL013W	TOM1	Q03280	3268 aa		4.62	□□□□□ -1.67
VAC8	YEL013W	ATG1	P53104	897 aa		4.62	□□□□□ -1.67
VAC8	YEL013W	TY1A-DR2	Q03964	440 aa	Known RBP	4.62	□□□□□ -1.67
VAC8	YEL013W	TRL1	P09880	827 aa	Known RBP	4.61	□□□□□ -1.67
VAC8	YEL013W	RPB10	P22139	70 aa		4.61	□□□□□ -1.67
VAC8	YEL013W	GRS1	P38088	690 aa	Known RBP	4.61	□□□□□ -1.67
VAC8	YEL013W	MSC7	P38694	644 aa		4.61	□□□□□ -1.67
VAC8	YEL013W	ERP5	P38819	212 aa		4.61	□□□□□ -1.67
VAC8	YEL013W	ACF4	P47129	309 aa		4.61	□□□□□ -1.67
VAC8	YEL013W	SMC1	P32908	1225 aa		4.6	□□□□□ -1.67
VAC8	YEL013W	ITC1	P53125	1264 aa		4.6	□□□□□ -1.67
VAC8	YEL013W	GPM1	P00950	247 aa	Known RBP	4.6	□□□□□ -1.67
VAC8	YEL013W	RAD55	P38953	406 aa		4.6	□□□□□ -1.67
VAC8	YEL013W	SRB8	P25648	1427 aa		4.6	□□□□□ -1.67
VAC8	YEL013W	AIM46	P38885	310 aa		4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 142.5 ms