RNA–Protein interactions for RNA: YDR354W

TRP4, Transcript of Anthranilate phosphoribosyl transferase, yeast

Gene TRP4, Length 1,143 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRP4	YDR354W	BIO5	P53744	561 aa	Known RBP	7.7	□□□□□ -1.18
TRP4	YDR354W	YCK2	P23292	546 aa	Known RBP	7.69	□□□□□ -1.18
TRP4	YDR354W	SLN1	P39928	1220 aa	Predicted RBP	7.69	□□□□□ -1.18
TRP4	YDR354W	GIP2	P40036	548 aa		7.69	□□□□□ -1.18
TRP4	YDR354W	PRY1	P47032	299 aa		7.68	□□□□□ -1.18
TRP4	YDR354W	YDR215C	Q12240	137 aa		7.68	□□□□□ -1.18
TRP4	YDR354W	COB	P00163	385 aa		7.67	□□□□□ -1.18
TRP4	YDR354W	STM1	P39015	273 aa	Known RBP	7.67	□□□□□ -1.18
TRP4	YDR354W	CDC55	Q00362	526 aa		7.67	□□□□□ -1.18
TRP4	YDR354W	MTC5	Q03897	1148 aa		7.67	□□□□□ -1.18
TRP4	YDR354W	BSC2	Q05611	235 aa		7.67	□□□□□ -1.18
TRP4	YDR354W	SOG2	Q08817	791 aa		7.67	□□□□□ -1.18
TRP4	YDR354W	RRM3	P38766	723 aa		7.66	□□□□□ -1.18
TRP4	YDR354W	SKN7	P38889	622 aa		7.66	□□□□□ -1.18
TRP4	YDR354W	GAS5	Q08193	484 aa		7.66	□□□□□ -1.18
TRP4	YDR354W	SLP1	Q12232	587 aa		7.66	□□□□□ -1.18
TRP4	YDR354W	GLO4	Q12320	285 aa		7.66	□□□□□ -1.18
TRP4	YDR354W	BUD9	P53226	547 aa		7.65	□□□□□ -1.18
TRP4	YDR354W	TY4B-P	A0A0B7P3V8	1104 aa		7.64	□□□□□ -1.19
TRP4	YDR354W	DUR3	P33413	735 aa		7.64	□□□□□ -1.19
TRP4	YDR354W	YHL008C	P38750	627 aa		7.64	□□□□□ -1.19
TRP4	YDR354W	LSB3	P43603	459 aa	Known RBP	7.64	□□□□□ -1.19
TRP4	YDR354W	YJR124C	P47159	448 aa		7.64	□□□□□ -1.19
TRP4	YDR354W	MSC6	Q08818	692 aa	Known RBP	7.64	□□□□□ -1.19
TRP4	YDR354W	TY4A-H	Q6Q5P6	413 aa		7.64	□□□□□ -1.19
TRP4	YDR354W	ECM2	P38241	364 aa	Known RBP	7.63	□□□□□ -1.19
TRP4	YDR354W	AMN1	P38285	549 aa	Predicted RBP	7.63	□□□□□ -1.19
TRP4	YDR354W	PAN5	P38787	379 aa		7.63	□□□□□ -1.19
TRP4	YDR354W	LSB6	P42951	607 aa		7.63	□□□□□ -1.19
TRP4	YDR354W	GUP1	P53154	560 aa		7.63	□□□□□ -1.19
TRP4	YDR354W	YNR065C	P53751	1116 aa		7.63	□□□□□ -1.19
TRP4	YDR354W	YML020W	Q03722	664 aa		7.63	□□□□□ -1.19
TRP4	YDR354W	TAT1	P38085	619 aa		7.62	□□□□□ -1.19
TRP4	YDR354W	NEO1	P40527	1151 aa		7.62	□□□□□ -1.19
TRP4	YDR354W	MCA1	Q08601	432 aa		7.62	□□□□□ -1.19
TRP4	YDR354W	IPL1	P38991	367 aa		7.61	□□□□□ -1.19
TRP4	YDR354W	CCT8	P47079	568 aa	Known RBP	7.61	□□□□□ -1.19
TRP4	YDR354W	SEN54	Q02825	467 aa	Predicted RBP	7.61	□□□□□ -1.19
TRP4	YDR354W	INP54	Q08227	384 aa	Known RBP	7.61	□□□□□ -1.19
TRP4	YDR354W	WHI5	Q12416	295 aa		7.61	□□□□□ -1.19
TRP4	YDR354W	FLP1	P03870	423 aa		7.6	□□□□□ -1.19
TRP4	YDR354W	HVG1	P0CE11	249 aa		7.6	□□□□□ -1.19
TRP4	YDR354W	PPX1	P38698	397 aa		7.6	□□□□□ -1.19
TRP4	YDR354W	THI12	P42883	340 aa		7.6	□□□□□ -1.19
TRP4	YDR354W	THI5	P43534	340 aa		7.6	□□□□□ -1.19
TRP4	YDR354W	THI11	P47183	340 aa		7.6	□□□□□ -1.19
TRP4	YDR354W	THI13	Q07748	340 aa		7.6	□□□□□ -1.19
TRP4	YDR354W	HAS1	Q03532	505 aa	Known RBP	7.59	□□□□□ -1.19
TRP4	YDR354W	NOC3	Q07896	663 aa	Predicted RBP	7.59	□□□□□ -1.19
TRP4	YDR354W	MET4	P32389	672 aa		7.58	□□□□□ -1.2
TRP4	YDR354W	RIM11	P38615	370 aa		7.58	□□□□□ -1.2
TRP4	YDR354W	FET4	P40988	552 aa		7.58	□□□□□ -1.2
TRP4	YDR354W	LEM3	P42838	414 aa		7.58	□□□□□ -1.2
TRP4	YDR354W	AI3	P03877	415 aa		7.57	□□□□□ -1.2
TRP4	YDR354W	SAC7	P17121	654 aa		7.57	□□□□□ -1.2
TRP4	YDR354W	NPR1	P22211	790 aa		7.57	□□□□□ -1.2
TRP4	YDR354W	POL5	P39985	1022 aa	Known RBP	7.57	□□□□□ -1.2
TRP4	YDR354W	SAM37	P50110	327 aa		7.57	□□□□□ -1.2
TRP4	YDR354W	MSH6	Q03834	1242 aa		7.57	□□□□□ -1.2
TRP4	YDR354W	CMR1	Q12510	522 aa	Known RBP	7.57	□□□□□ -1.2
TRP4	YDR354W	PHO4	P07270	312 aa	Known RBP	7.56	□□□□□ -1.2
TRP4	YDR354W	SEC20	P28791	383 aa		7.56	□□□□□ -1.2
TRP4	YDR354W	SPO71	Q03868	1245 aa		7.56	□□□□□ -1.2
TRP4	YDR354W	TY1A-NL1	Q12391	440 aa	Known RBP	7.56	□□□□□ -1.2
TRP4	YDR354W	SFA1	P32771	386 aa		7.55	□□□□□ -1.2
TRP4	YDR354W	SLD2	P34252	453 aa		7.55	□□□□□ -1.2
TRP4	YDR354W	NUT1	P53114	1132 aa		7.55	□□□□□ -1.2
TRP4	YDR354W	MON1	P53129	644 aa		7.55	□□□□□ -1.2
TRP4	YDR354W	DSE4	P53753	1117 aa		7.55	□□□□□ -1.2
TRP4	YDR354W	CIC1	P38779	376 aa	Known RBP	7.54	□□□□□ -1.2
TRP4	YDR354W	NOP8	Q08287	484 aa	Predicted RBP	7.54	□□□□□ -1.2
TRP4	YDR354W	ELG1	Q12050	791 aa		7.53	□□□□□ -1.2
TRP4	YDR354W	ERS1	P17261	260 aa		7.52	□□□□□ -1.21
TRP4	YDR354W	PRP5	P21372	849 aa	Predicted RBP	7.52	□□□□□ -1.21
TRP4	YDR354W	MAE1	P36013	669 aa	Known RBP	7.52	□□□□□ -1.21
TRP4	YDR354W	YPL034W	Q03083	165 aa		7.52	□□□□□ -1.21
TRP4	YDR354W	GCD6	P32501	712 aa	Known RBP	7.51	□□□□□ -1.21
TRP4	YDR354W	DAK2	P43550	591 aa		7.51	□□□□□ -1.21
TRP4	YDR354W	SAP155	P43612	1002 aa		7.51	□□□□□ -1.21
TRP4	YDR354W	YCS4	Q06156	1176 aa		7.51	□□□□□ -1.21
TRP4	YDR354W	PMT7	Q06644	662 aa		7.51	□□□□□ -1.21
TRP4	YDR354W	RSC6	P25632	483 aa		7.5	□□□□□ -1.21
TRP4	YDR354W	MCM5	P29496	775 aa	Known RBP	7.5	□□□□□ -1.21
TRP4	YDR354W	VPS35	P34110	944 aa		7.5	□□□□□ -1.21
TRP4	YDR354W	ARI1	P53111	347 aa	Known RBP	7.5	□□□□□ -1.21
TRP4	YDR354W	YAF9	P53930	226 aa		7.5	□□□□□ -1.21
TRP4	YDR354W	HTS1	P07263	546 aa	Known RBP	7.49	□□□□□ -1.21
TRP4	YDR354W	TOS4	Q06266	489 aa		7.49	□□□□□ -1.21
TRP4	YDR354W	RVS167	P39743	482 aa	Known RBP	7.48	□□□□□ -1.21
TRP4	YDR354W	KIP3	P53086	805 aa	Known RBP	7.48	□□□□□ -1.21
TRP4	YDR354W	YMR074C	Q04773	145 aa		7.48	□□□□□ -1.21
TRP4	YDR354W	UGA4	P32837	571 aa		7.47	□□□□□ -1.21
TRP4	YDR354W	PRP40	P33203	583 aa	Known RBP	7.46	□□□□□ -1.22
TRP4	YDR354W	RPT1	P33299	467 aa	Known RBP	7.46	□□□□□ -1.22
TRP4	YDR354W	NCE103	P53615	221 aa		7.46	□□□□□ -1.22
TRP4	YDR354W	FAR11	P53917	953 aa		7.46	□□□□□ -1.22
TRP4	YDR354W	DAL4	Q04895	635 aa		7.46	□□□□□ -1.22
TRP4	YDR354W	YIG1	Q08956	461 aa		7.46	□□□□□ -1.22
TRP4	YDR354W	REC8	Q12188	680 aa		7.46	□□□□□ -1.22
TRP4	YDR354W	NAM7	P30771	971 aa	Known RBP	7.44	□□□□□ -1.22

Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms