RNA–Protein interactions for RNA: YDL229W

SSB1, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeastyeast

Gene SSB1, Length 1,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSB1YDL229W TAP42Q04372 366 aa4.81□□□□□ -1.64
SSB1YDL229W YDL144CQ07589 356 aa4.81□□□□□ -1.64
SSB1YDL229W GNT1Q12096 491 aa4.81□□□□□ -1.64
SSB1YDL229W RAD9P14737 1309 aa4.81□□□□□ -1.64
SSB1YDL229W SMC4Q12267 1418 aa4.81□□□□□ -1.64
SSB1YDL229W TY2B-BQ12491 1770 aa4.81□□□□□ -1.64
SSB1YDL229W YLR419WQ06698 1435 aaKnown RBP4.81□□□□□ -1.64
SSB1YDL229W NAT1P12945 854 aaKnown RBP4.81□□□□□ -1.64
SSB1YDL229W MER1P16523 270 aa4.81□□□□□ -1.64
SSB1YDL229W APL2P36000 726 aaPredicted RBP4.81□□□□□ -1.64
SSB1YDL229W SPC72P39723 622 aa4.81□□□□□ -1.64
SSB1YDL229W RTT105P40063 208 aa4.81□□□□□ -1.64
SSB1YDL229W RIO2P40160 425 aaKnown RBP4.81□□□□□ -1.64
SSB1YDL229W ALG2P43636 503 aa4.81□□□□□ -1.64
SSB1YDL229W RIM21P48565 533 aa4.81□□□□□ -1.64
SSB1YDL229W HOP2P53187 214 aa4.81□□□□□ -1.64
SSB1YDL229W CDC25P04821 1589 aa4.8□□□□□ -1.64
SSB1YDL229W SMY1P32364 656 aaKnown RBP4.8□□□□□ -1.64
SSB1YDL229W YME2P32843 850 aa4.8□□□□□ -1.64
SSB1YDL229W BUD2P33314 1104 aa4.8□□□□□ -1.64
SSB1YDL229W PET112P33893 541 aa4.8□□□□□ -1.64
SSB1YDL229W VPS24P36095 224 aaKnown RBP4.8□□□□□ -1.64
SSB1YDL229W TAF5P38129 798 aa4.8□□□□□ -1.64
SSB1YDL229W OSH3P38713 996 aaKnown RBP4.8□□□□□ -1.64
SSB1YDL229W RSM25P40496 264 aa4.8□□□□□ -1.64
SSB1YDL229W SET2P46995 733 aaKnown RBP4.8□□□□□ -1.64
SSB1YDL229W DAS1P47005 663 aa4.8□□□□□ -1.64
SSB1YDL229W SRB7P47822 140 aa4.8□□□□□ -1.64
SSB1YDL229W ENP2P48234 707 aaKnown RBP4.8□□□□□ -1.64
SSB1YDL229W FMP30Q02883 468 aa4.8□□□□□ -1.64
SSB1YDL229W PUF6Q04373 656 aaKnown RBP4.8□□□□□ -1.64
SSB1YDL229W AOS1Q06624 347 aa4.8□□□□□ -1.64
SSB1YDL229W YOL057WQ08225 711 aa4.8□□□□□ -1.64
SSB1YDL229W YBL111CQ3E7Y5 667 aa4.8□□□□□ -1.64
SSB1YDL229W TY1B-BRQ12193 1756 aa4.8□□□□□ -1.64
SSB1YDL229W TY1B-GR3Q12316 1755 aa4.8□□□□□ -1.64
SSB1YDL229W TY1B-ORQ92393 1755 aa4.8□□□□□ -1.64
SSB1YDL229W HEM1P09950 548 aaPredicted RBP4.79□□□□□ -1.64
SSB1YDL229W RPB4P20433 221 aaPredicted RBP4.79□□□□□ -1.64
SSB1YDL229W TMN3P40071 706 aa4.79□□□□□ -1.64
SSB1YDL229W FTR1P40088 404 aa4.79□□□□□ -1.64
SSB1YDL229W IRR1P40541 1150 aa4.79□□□□□ -1.64
SSB1YDL229W NOP15P53927 220 aaPredicted RBP4.79□□□□□ -1.64
SSB1YDL229W FUS2Q05670 677 aa4.79□□□□□ -1.64
SSB1YDL229W NOC3Q07896 663 aaPredicted RBP4.79□□□□□ -1.64
SSB1YDL229W TCB1Q12466 1186 aa4.79□□□□□ -1.64
SSB1YDL229W PDR10P51533 1564 aa4.79□□□□□ -1.64
SSB1YDL229W TRM3Q07527 1436 aa4.79□□□□□ -1.64
SSB1YDL229W STE6P12866 1290 aa4.79□□□□□ -1.64
SSB1YDL229W SEN2P16658 377 aa4.79□□□□□ -1.64
SSB1YDL229W HNM1P19807 563 aa4.79□□□□□ -1.64
SSB1YDL229W OCA4P25366 362 aa4.79□□□□□ -1.64
SSB1YDL229W KAR9P32526 644 aa4.79□□□□□ -1.64
SSB1YDL229W UBP14P38237 781 aaKnown RBP4.79□□□□□ -1.64
SSB1YDL229W YTA6P40328 754 aa4.79□□□□□ -1.64
SSB1YDL229W ATG3P40344 310 aa4.79□□□□□ -1.64
SSB1YDL229W RPN4Q03465 531 aa4.79□□□□□ -1.64
SSB1YDL229W LCD1Q04377 747 aa4.79□□□□□ -1.64
SSB1YDL229W RNH1Q04740 348 aa4.79□□□□□ -1.64
SSB1YDL229W SPP382Q06411 708 aaPredicted RBP4.79□□□□□ -1.64
SSB1YDL229W RIO1Q12196 484 aaKnown RBP4.79□□□□□ -1.64
SSB1YDL229W ARP8Q12386 881 aaKnown RBP RIP-Chip data4.79□□□□□ -1.64not detected
SSB1YDL229W DPH6Q12429 685 aa4.79□□□□□ -1.64
SSB1YDL229W RRP36Q12481 300 aaPredicted RBP4.79□□□□□ -1.64
SSB1YDL229W HAA1Q12753 694 aaKnown RBP4.79□□□□□ -1.64
SSB1YDL229W TY1B-HO13535 1793 aa4.78□□□□□ -1.64
SSB1YDL229W TY1B-DR5P0C2I2 1755 aa4.78□□□□□ -1.64
SSB1YDL229W TY1B-DR6P0C2I3 1755 aa4.78□□□□□ -1.64
SSB1YDL229W TY1B-LR2P0C2I5 1755 aa4.78□□□□□ -1.64
SSB1YDL229W TY1B-LR3P0C2I6 1755 aaKnown RBP4.78□□□□□ -1.64
SSB1YDL229W TY1B-PR1P0C2I9 1755 aaKnown RBP4.78□□□□□ -1.64
SSB1YDL229W TY1B-PR2P0C2J0 1756 aa4.78□□□□□ -1.64
SSB1YDL229W TY1B-PR3P0C2J1 1755 aaKnown RBP4.78□□□□□ -1.64
SSB1YDL229W TY1B-JR1P47098 1755 aa4.78□□□□□ -1.64
SSB1YDL229W TY1B-ML2Q03434 1755 aaKnown RBP4.78□□□□□ -1.64
SSB1YDL229W TY1B-ER1Q03612 1755 aa4.78□□□□□ -1.64
SSB1YDL229W TY1B-ML1Q04711 1755 aaKnown RBP4.78□□□□□ -1.64
SSB1YDL229W TY1B-GR2Q12269 1755 aa4.78□□□□□ -1.64
SSB1YDL229W TY1B-OLQ12273 1755 aa4.78□□□□□ -1.64
SSB1YDL229W TY1B-PLQ12414 1755 aaKnown RBP4.78□□□□□ -1.64
SSB1YDL229W PLC1P32383 869 aa4.78□□□□□ -1.64
SSB1YDL229W SEC8P32855 1065 aa4.78□□□□□ -1.64
SSB1YDL229W PTR2P32901 601 aa4.78□□□□□ -1.64
SSB1YDL229W SEC66P33754 206 aa4.78□□□□□ -1.64
SSB1YDL229W ABZ1P37254 787 aaPredicted RBP4.78□□□□□ -1.64
SSB1YDL229W UGA2P38067 497 aa4.78□□□□□ -1.64
SSB1YDL229W OTU2P38747 307 aaKnown RBP4.78□□□□□ -1.64
SSB1YDL229W IOC3P43596 787 aa4.78□□□□□ -1.64
SSB1YDL229W CKB1P43639 278 aa4.78□□□□□ -1.64
SSB1YDL229W GCD14P46959 383 aaPredicted RBP4.78□□□□□ -1.64
SSB1YDL229W RTF1P53064 558 aa4.78□□□□□ -1.64
SSB1YDL229W ORM1P53224 222 aa4.78□□□□□ -1.64
SSB1YDL229W CAF130P53280 1122 aaPredicted RBP4.78□□□□□ -1.64
SSB1YDL229W DCP2P53550 970 aaKnown RBP4.78□□□□□ -1.64
SSB1YDL229W UBP3Q01477 912 aaKnown RBP RIP-Chip data4.78□□□□□ -1.64not detected
SSB1YDL229W STE20Q03497 939 aaKnown RBP4.78□□□□□ -1.64
SSB1YDL229W INP2Q03824 705 aa4.78□□□□□ -1.64
SSB1YDL229W NNT1Q05874 261 aa4.78□□□□□ -1.64
SSB1YDL229W ESC2Q06340 456 aa4.78□□□□□ -1.64
SSB1YDL229W SWI1P09547 1314 aa4.77□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 10.8 ms