RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 YTHDC2Q9H6S0 1430 aaKnown RBP11.85□□□□□ -0.51
PHGDH-217ENST00000641455 RREB1Q92766 1687 aa11.84□□□□□ -0.51
PHGDH-217ENST00000641455 NUP188Q5SRE5 1749 aa11.84□□□□□ -0.51
PHGDH-217ENST00000641455 SLC4A1APQ9BWU0 796 aaKnown RBP11.84□□□□□ -0.51
PHGDH-217ENST00000641455 STRN4Q9NRL3 753 aa11.84□□□□□ -0.51
PHGDH-217ENST00000641455 CAMTA1Q9Y6Y1 1673 aa11.84□□□□□ -0.51
PHGDH-217ENST00000641455 GPRASP1Q5JY77 1395 aa11.83□□□□□ -0.52
PHGDH-217ENST00000641455 KCNQ2O43526 872 aa11.83□□□□□ -0.52
PHGDH-217ENST00000641455 PDE3BQ13370 1112 aa11.82□□□□□ -0.52
PHGDH-217ENST00000641455 USP35Q9P2H5 1018 aa11.82□□□□□ -0.52
PHGDH-217ENST00000641455 SPATA31A1Q5TZJ5 1347 aa11.82□□□□□ -0.52
PHGDH-217ENST00000641455 ANKRD30BQ9BXX2 1392 aa11.81□□□□□ -0.52
PHGDH-217ENST00000641455 TRPM3Q9HCF6 1732 aaPredicted RBP11.81□□□□□ -0.52
PHGDH-217ENST00000641455 PAK3O75914 559 aaPredicted RBP11.81□□□□□ -0.52
PHGDH-217ENST00000641455 PPARGC1BQ86YN6 1023 aaKnown RBP11.81□□□□□ -0.52
PHGDH-217ENST00000641455 ZNF784Q8NCA9 323 aaPredicted RBP11.81□□□□□ -0.52
PHGDH-217ENST00000641455 PRAM1Q96QH2 718 aa11.8□□□□□ -0.52
PHGDH-217ENST00000641455 POGKQ9P215 609 aa11.8□□□□□ -0.52
PHGDH-217ENST00000641455 ALS2Q96Q42 1657 aa11.8□□□□□ -0.52
PHGDH-217ENST00000641455 PIK3C2GO75747 1445 aa11.79□□□□□ -0.52
PHGDH-217ENST00000641455 ANKARQ7Z5J8 1434 aa11.79□□□□□ -0.52
PHGDH-217ENST00000641455 CHRNA2Q15822 529 aa11.79□□□□□ -0.52
PHGDH-217ENST00000641455 IFFO2Q5TF58 517 aa11.79□□□□□ -0.52
PHGDH-217ENST00000641455 SIRT1Q96EB6 747 aa11.79□□□□□ -0.52
PHGDH-217ENST00000641455 DHX57Q6P158 1386 aaKnown RBP11.79□□□□□ -0.52
PHGDH-217ENST00000641455 EVA1CP58658 441 aa11.78□□□□□ -0.52
PHGDH-217ENST00000641455 ACIN1Q9UKV3 1341 aaKnown RBP11.78□□□□□ -0.52
PHGDH-217ENST00000641455 KIAA0232Q92628 1395 aa11.78□□□□□ -0.52
PHGDH-217ENST00000641455 NGDNQ8NEJ9 315 aaKnown RBP11.77□□□□□ -0.53
PHGDH-217ENST00000641455 NRKQ7Z2Y5 1582 aa11.76□□□□□ -0.53
PHGDH-217ENST00000641455 HIRIP3Q9BW71 556 aaPredicted RBP11.76□□□□□ -0.53
PHGDH-217ENST00000641455 CRYBG1Q9Y4K1 1723 aa11.76□□□□□ -0.53
PHGDH-217ENST00000641455 SPATA31E1Q6ZUB1 1445 aa11.76□□□□□ -0.53
PHGDH-217ENST00000641455 C1QTNF8P60827 252 aa11.75□□□□□ -0.53
PHGDH-217ENST00000641455 ZC3H6P61129 1189 aaKnown RBP11.75□□□□□ -0.53
PHGDH-217ENST00000641455 CFAP70Q5T0N1 1121 aa11.75□□□□□ -0.53
PHGDH-217ENST00000641455 EIF3AQ14152 1382 aaKnown RBP11.75□□□□□ -0.53
PHGDH-217ENST00000641455 ZBTB7AO95365 584 aa11.74□□□□□ -0.53
PHGDH-217ENST00000641455 BARGINQ6ZT62 677 aa11.74□□□□□ -0.53
PHGDH-217ENST00000641455 C14orf93Q9H972 538 aaKnown RBP11.74□□□□□ -0.53
PHGDH-217ENST00000641455 MINK1Q8N4C8 1332 aaPredicted RBP11.74□□□□□ -0.53
PHGDH-217ENST00000641455 MYOM1P52179 1685 aa11.73□□□□□ -0.53
PHGDH-217ENST00000641455 NUTM2GQ5VZR2 741 aa11.73□□□□□ -0.53
PHGDH-217ENST00000641455 SSH2Q76I76 1423 aa11.73□□□□□ -0.53
PHGDH-217ENST00000641455 TCP11L2Q8N4U5 519 aa11.73□□□□□ -0.53
PHGDH-217ENST00000641455 PHRF1Q9P1Y6 1649 aaKnown RBP11.73□□□□□ -0.53
PHGDH-217ENST00000641455 PRR36Q9H6K5 1346 aa11.72□□□□□ -0.53
PHGDH-217ENST00000641455 BCL11BQ9C0K0 894 aaPredicted RBP11.72□□□□□ -0.53
PHGDH-217ENST00000641455 ANO8Q9HCE9 1232 aaPredicted RBP11.72□□□□□ -0.53
PHGDH-217ENST00000641455 ATF5Q9Y2D1 282 aaPredicted RBP11.72□□□□□ -0.53
PHGDH-217ENST00000641455 CHD4Q14839 1912 aa11.72□□□□□ -0.53
PHGDH-217ENST00000641455 TULP4Q9NRJ4 1543 aa11.71□□□□□ -0.53
PHGDH-217ENST00000641455 LARP1Q6PKG0 1096 aaKnown RBP11.71□□□□□ -0.53
PHGDH-217ENST00000641455 CASZ1Q86V15 1759 aa11.71□□□□□ -0.54
PHGDH-217ENST00000641455 DLC1Q96QB1 1528 aa11.7□□□□□ -0.54
PHGDH-217ENST00000641455 FHDC1Q9C0D6 1143 aaPredicted RBP11.7□□□□□ -0.54
PHGDH-217ENST00000641455 PDGFDQ9GZP0 370 aaPredicted RBP11.7□□□□□ -0.54
PHGDH-217ENST00000641455 TRAK1Q9UPV9 953 aa11.7□□□□□ -0.54
PHGDH-217ENST00000641455 OVOS2A0A0G2JMS6 1433 aa11.69□□□□□ -0.54
PHGDH-217ENST00000641455 OVOS2A0A0J9YW53 1432 aa11.69□□□□□ -0.54
PHGDH-217ENST00000641455 OVOS2Q6IE36 1432 aa11.69□□□□□ -0.54
PHGDH-217ENST00000641455 C11orf95C9JLR9 678 aaPredicted RBP11.69□□□□□ -0.54
PHGDH-217ENST00000641455 ZBTB7CA1YPR0 619 aa11.68□□□□□ -0.54
PHGDH-217ENST00000641455 WASLO00401 505 aaPredicted RBP11.68□□□□□ -0.54
PHGDH-217ENST00000641455 GIGYF1O75420 1035 aaPredicted RBP11.68□□□□□ -0.54
PHGDH-217ENST00000641455 SYT17Q9BSW7 474 aa11.68□□□□□ -0.54
PHGDH-217ENST00000641455 RGPD3A6NKT7 1758 aaPredicted RBP11.68□□□□□ -0.54
PHGDH-217ENST00000641455 RGPD4Q7Z3J3 1758 aa11.68□□□□□ -0.54
PHGDH-217ENST00000641455 PARP4Q9UKK3 1724 aaKnown RBP11.68□□□□□ -0.54
PHGDH-217ENST00000641455 ATP7BP35670 1465 aa11.68□□□□□ -0.54
PHGDH-217ENST00000641455 ITSN1Q15811 1721 aa11.67□□□□□ -0.54
PHGDH-217ENST00000641455 PTGER2P43116 358 aa11.67□□□□□ -0.54
PHGDH-217ENST00000641455 STK32BQ9NY57 414 aa11.67□□□□□ -0.54
PHGDH-217ENST00000641455 THRAP3Q9Y2W1 955 aaKnown RBP11.67□□□□□ -0.54
PHGDH-217ENST00000641455 PLSCR1O15162 318 aa11.66□□□□□ -0.54
PHGDH-217ENST00000641455 SBF2Q86WG5 1849 aa11.65□□□□□ -0.54
PHGDH-217ENST00000641455 MPHOSPH9Q99550 1183 aa11.65□□□□□ -0.54
PHGDH-217ENST00000641455 DDB1Q16531 1140 aa11.64□□□□□ -0.55
PHGDH-217ENST00000641455 GPR162Q16538 588 aa11.64□□□□□ -0.55
PHGDH-217ENST00000641455 PTF1AQ7RTS3 328 aa11.64□□□□□ -0.55
PHGDH-217ENST00000641455 ABTB2Q8N961 1025 aa11.64□□□□□ -0.55
PHGDH-217ENST00000641455 NUDT16Q96DE0 195 aaKnown RBP11.64□□□□□ -0.55
PHGDH-217ENST00000641455 LMO7Q8WWI1 1683 aa11.64□□□□□ -0.55
PHGDH-217ENST00000641455 PEAK1Q9H792 1746 aa11.63□□□□□ -0.55
PHGDH-217ENST00000641455 PELP1Q8IZL8 1130 aaKnown RBP11.63□□□□□ -0.55
PHGDH-217ENST00000641455 KLHL34Q8N239 644 aa11.63□□□□□ -0.55
PHGDH-217ENST00000641455 MTFR1LQ9H019 292 aa11.63□□□□□ -0.55
PHGDH-217ENST00000641455 LRRC37A3O60309 1634 aa11.63□□□□□ -0.55
PHGDH-217ENST00000641455 COL5A2P05997 1499 aaPredicted RBP11.63□□□□□ -0.55
PHGDH-217ENST00000641455 ADGRB1O14514 1584 aa11.62□□□□□ -0.55
PHGDH-217ENST00000641455 CRB1P82279 1406 aa11.62□□□□□ -0.55
PHGDH-217ENST00000641455 SLC15A2Q16348 729 aa11.62□□□□□ -0.55
PHGDH-217ENST00000641455 ARXQ96QS3 562 aa11.62□□□□□ -0.55
PHGDH-217ENST00000641455 CPDO75976 1380 aa11.62□□□□□ -0.55
PHGDH-217ENST00000641455 TXNRD1Q16881 649 aa11.61□□□□□ -0.55
PHGDH-217ENST00000641455 TOM1L2Q6ZVM7 507 aa11.61□□□□□ -0.55
PHGDH-217ENST00000641455 PROM2Q8N271 834 aa11.61□□□□□ -0.55
PHGDH-217ENST00000641455 ACEP12821 1306 aa11.6□□□□□ -0.55
PHGDH-217ENST00000641455 AKAP12Q02952 1782 aa11.6□□□□□ -0.55
PHGDH-217ENST00000641455 NLRP13Q86W25 1043 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms