RNA–Protein interactions for RNA: ENST00000641314.1

PHGDH-214, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-214ENST00000641314 BRD4O60885 1362 aaPredicted RBP23.79■■□□□ 1.4
PHGDH-214ENST00000641314 C1orf167Q5SNV9 1468 aa23.78■■□□□ 1.4
PHGDH-214ENST00000641314 TNNT2P45379 298 aaPredicted RBP23.78■■□□□ 1.4
PHGDH-214ENST00000641314 CADPS2Q86UW7 1296 aa23.78■■□□□ 1.4
PHGDH-214ENST00000641314 NME9Q86XW9 330 aa23.78■■□□□ 1.4
PHGDH-214ENST00000641314 MST1RQ04912 1400 aa23.77■■□□□ 1.4
PHGDH-214ENST00000641314 ORAI2Q96SN7 254 aa23.77■■□□□ 1.4
PHGDH-214ENST00000641314 TTC21BQ7Z4L5 1316 aa23.77■■□□□ 1.4
PHGDH-214ENST00000641314 ZRANB1Q9UGI0 708 aa23.73■■□□□ 1.39
PHGDH-214ENST00000641314 KIF1AQ12756 1690 aa23.72■■□□□ 1.39
PHGDH-214ENST00000641314 SSH2Q76I76 1423 aa23.72■■□□□ 1.39
PHGDH-214ENST00000641314 FAM9BQ8IZU0 186 aa23.72■■□□□ 1.39
PHGDH-214ENST00000641314 TTC21AQ8NDW8 1320 aa23.7■■□□□ 1.39
PHGDH-214ENST00000641314 PSME1Q06323 249 aa23.69■■□□□ 1.38
PHGDH-214ENST00000641314 COG3Q96JB2 828 aa23.69■■□□□ 1.38
PHGDH-214ENST00000641314 LTBP4Q8N2S1 1624 aa23.69■■□□□ 1.38
PHGDH-214ENST00000641314 FOXO3O43524 673 aa23.68■■□□□ 1.38
PHGDH-214ENST00000641314 PAK3O75914 559 aaPredicted RBP23.68■■□□□ 1.38
PHGDH-214ENST00000641314 PIK3C2AO00443 1686 aa23.66■■□□□ 1.38
PHGDH-214ENST00000641314 XPCQ01831 940 aaPredicted RBP23.65■■□□□ 1.38
PHGDH-214ENST00000641314 PNISRQ8TF01 805 aaKnown RBP23.65■■□□□ 1.38
PHGDH-214ENST00000641314 MTHFSP49914 203 aa23.64■■□□□ 1.37
PHGDH-214ENST00000641314 SLAIN2Q9P270 581 aa23.64■■□□□ 1.37
PHGDH-214ENST00000641314 OVOS2A0A0J9YW53 1432 aa23.63■■□□□ 1.37
PHGDH-214ENST00000641314 OVOS2Q6IE36 1432 aa23.63■■□□□ 1.37
PHGDH-214ENST00000641314 SCAF1Q9H7N4 1312 aaKnown RBP23.62■■□□□ 1.37
PHGDH-214ENST00000641314 NUTM2GQ5VZR2 741 aa23.61■■□□□ 1.37
PHGDH-214ENST00000641314 KRT28Q7Z3Y7 464 aa23.61■■□□□ 1.37
PHGDH-214ENST00000641314 ABTB2Q8N961 1025 aa23.61■■□□□ 1.37
PHGDH-214ENST00000641314 FBLN1P23142 703 aa23.61■■□□□ 1.37
PHGDH-214ENST00000641314 USP31Q70CQ4 1352 aa23.6■■□□□ 1.37
PHGDH-214ENST00000641314 NLRP6P59044 892 aa23.6■■□□□ 1.37
PHGDH-214ENST00000641314 DDX17Q92841 729 aaKnown RBP23.6■■□□□ 1.37
PHGDH-214ENST00000641314 TRPM3Q9HCF6 1732 aaPredicted RBP23.59■■□□□ 1.37
PHGDH-214ENST00000641314 BRINP3Q76B58 766 aa23.59■■□□□ 1.37
PHGDH-214ENST00000641314 CFAP53Q96M91 514 aa23.59■■□□□ 1.37
PHGDH-214ENST00000641314 NPHP3Q7Z494 1330 aa23.58■■□□□ 1.37
PHGDH-214ENST00000641314 MAP2P11137 1827 aaKnown RBP23.58■■□□□ 1.37
PHGDH-214ENST00000641314 SOX12O15370 315 aa23.57■■□□□ 1.36
PHGDH-214ENST00000641314 WDR43Q15061 677 aaKnown RBP eCLIP23.57■■□□□ 1.36
PHGDH-214ENST00000641314 AATKQ6ZMQ8 1374 aa23.56■■□□□ 1.36
PHGDH-214ENST00000641314 MARF1Q9Y4F3 1742 aaKnown RBP23.56■■□□□ 1.36
PHGDH-214ENST00000641314 USP54Q70EL1 1684 aa23.56■■□□□ 1.36
PHGDH-214ENST00000641314 PPM1GO15355 546 aaPredicted RBP23.56■■□□□ 1.36
PHGDH-214ENST00000641314 LMOD2Q6P5Q4 547 aa23.56■■□□□ 1.36
PHGDH-214ENST00000641314 POLKQ9UBT6 870 aa23.56■■□□□ 1.36
PHGDH-214ENST00000641314 RRS1Q15050 365 aaKnown RBP23.54■■□□□ 1.36
PHGDH-214ENST00000641314 EMILIN1Q9Y6C2 1016 aa23.54■■□□□ 1.36
PHGDH-214ENST00000641314 HNRNPUQ00839 825 aaKnown RBP eCLIP23.53■■□□□ 1.36
PHGDH-214ENST00000641314 PXDNQ92626 1479 aa23.52■■□□□ 1.36
PHGDH-214ENST00000641314 SHPRHQ149N8 1683 aa23.51■■□□□ 1.35
PHGDH-214ENST00000641314 SMG6Q86US8 1419 aaKnown RBP23.51■■□□□ 1.35
PHGDH-214ENST00000641314 ALS2Q96Q42 1657 aa23.5■■□□□ 1.35
PHGDH-214ENST00000641314 PLEKHG5O94827 1062 aa23.5■■□□□ 1.35
PHGDH-214ENST00000641314 ADAMTS8Q9UP79 889 aa23.5■■□□□ 1.35
PHGDH-214ENST00000641314 COL3A1P02461 1466 aaPredicted RBP23.5■■□□□ 1.35
PHGDH-214ENST00000641314 SBNO1A3KN83 1393 aa23.5■■□□□ 1.35
PHGDH-214ENST00000641314 CDK12Q9NYV4 1490 aaPredicted RBP23.48■■□□□ 1.35
PHGDH-214ENST00000641314 TNS3Q68CZ2 1445 aa23.47■■□□□ 1.35
PHGDH-214ENST00000641314 PNPLA6Q8IY17 1366 aa23.47■■□□□ 1.35
PHGDH-214ENST00000641314 CENPBP07199 599 aaPredicted RBP23.46■■□□□ 1.35
PHGDH-214ENST00000641314 NHSL1Q5SYE7 1610 aa23.46■■□□□ 1.35
PHGDH-214ENST00000641314 ROBO1Q9Y6N7 1651 aa23.45■■□□□ 1.34
PHGDH-214ENST00000641314 DIAPH1O60610 1272 aaKnown RBP23.45■■□□□ 1.34
PHGDH-214ENST00000641314 INSRP06213 1382 aa23.45■■□□□ 1.34
PHGDH-214ENST00000641314 PEAK1Q9H792 1746 aa23.45■■□□□ 1.34
PHGDH-214ENST00000641314 MAP3K19Q56UN5 1328 aa23.45■■□□□ 1.34
PHGDH-214ENST00000641314 SENP3-EIF4A1A0A087X0R7 540 aa23.44■■□□□ 1.34
PHGDH-214ENST00000641314 NUDCQ9Y266 331 aa23.44■■□□□ 1.34
PHGDH-214ENST00000641314 SPATA31A3Q5VYP0 1347 aa23.44■■□□□ 1.34
PHGDH-214ENST00000641314 BLMP54132 1417 aaPredicted RBP23.44■■□□□ 1.34
PHGDH-214ENST00000641314 SOS2Q07890 1332 aaPredicted RBP23.43■■□□□ 1.34
PHGDH-214ENST00000641314 U2SURPO15042 1029 aaKnown RBP23.43■■□□□ 1.34
PHGDH-214ENST00000641314 KCNH5Q8NCM2 988 aa23.43■■□□□ 1.34
PHGDH-214ENST00000641314 SLIT3O75094 1523 aa23.42■■□□□ 1.34
PHGDH-214ENST00000641314 NFAT5O94916 1531 aa23.42■■□□□ 1.34
PHGDH-214ENST00000641314 USP19O94966 1318 aa23.42■■□□□ 1.34
PHGDH-214ENST00000641314 AMPHP49418 695 aa23.42■■□□□ 1.34
PHGDH-214ENST00000641314 ARHGEF10O15013 1369 aa23.41■■□□□ 1.34
PHGDH-214ENST00000641314 U2AF1L5P0DN76 240 aaPredicted RBP23.41■■□□□ 1.34
PHGDH-214ENST00000641314 U2AF1Q01081 240 aaKnown RBP eCLIP23.41■■□□□ 1.34
PHGDH-214ENST00000641314 CCDC146Q8IYE0 955 aa23.4■■□□□ 1.34
PHGDH-214ENST00000641314 LTN1O94822 1766 aa23.4■■□□□ 1.34
PHGDH-214ENST00000641314 ZBTB7CA1YPR0 619 aa23.4■■□□□ 1.34
PHGDH-214ENST00000641314 TOM1O60784 492 aa23.4■■□□□ 1.34
PHGDH-214ENST00000641314 GCP02774 474 aa23.4■■□□□ 1.34
PHGDH-214ENST00000641314 MED1Q15648 1581 aaPredicted RBP23.4■■□□□ 1.34
PHGDH-214ENST00000641314 FLT4P35916 1363 aa23.39■■□□□ 1.33
PHGDH-214ENST00000641314 HSP90AB2PQ58FF8 381 aa23.38■■□□□ 1.33
PHGDH-214ENST00000641314 PHRF1Q9P1Y6 1649 aaKnown RBP23.37■■□□□ 1.33
PHGDH-214ENST00000641314 IL13P35225 146 aa23.36■■□□□ 1.33
PHGDH-214ENST00000641314 PIP4K2BP78356 416 aa23.36■■□□□ 1.33
PHGDH-214ENST00000641314 AHDC1Q5TGY3 1603 aaPredicted RBP23.36■■□□□ 1.33
PHGDH-214ENST00000641314 UBAP1LF5GYI3 381 aa23.35■■□□□ 1.33
PHGDH-214ENST00000641314 CABLES1Q8TDN4 633 aa23.35■■□□□ 1.33
PHGDH-214ENST00000641314 ZBED9Q6R2W3 1325 aa23.35■■□□□ 1.33
PHGDH-214ENST00000641314 HOXC9P31274 260 aa23.35■■□□□ 1.33
PHGDH-214ENST00000641314 EIF4A2Q14240 407 aaKnown RBP23.35■■□□□ 1.33
PHGDH-214ENST00000641314 SALL2Q9Y467 1007 aaPredicted RBP23.35■■□□□ 1.33
PHGDH-214ENST00000641314 KIF24Q5T7B8 1368 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms