RNA–Protein interactions for RNA: ENST00000640717.1

SPIN3-243, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-243ENST00000640717 RIPK4P57078 832 aa16.57■□□□□ 0.24
SPIN3-243ENST00000640717 PRKAR2BP31323 418 aa16.57■□□□□ 0.24
SPIN3-243ENST00000640717 SPATA31D1Q6ZQQ2 1576 aa16.57■□□□□ 0.24
SPIN3-243ENST00000640717 C14orf37Q86TY3 774 aa16.56■□□□□ 0.24
SPIN3-243ENST00000640717 BCL11AQ9H165 835 aa16.56■□□□□ 0.24
SPIN3-243ENST00000640717 PHACTR3Q96KR7 559 aa16.55■□□□□ 0.24
SPIN3-243ENST00000640717 TMPOP42166 694 aaKnown RBP16.54■□□□□ 0.24
SPIN3-243ENST00000640717 COG3Q96JB2 828 aa16.54■□□□□ 0.24
SPIN3-243ENST00000640717 TRMT2AQ8IZ69 625 aaKnown RBP16.54■□□□□ 0.24
SPIN3-243ENST00000640717 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.54■□□□□ 0.24
SPIN3-243ENST00000640717 PUS7Q96PZ0 661 aaKnown RBP16.54■□□□□ 0.24
SPIN3-243ENST00000640717 EXOSC9Q06265 439 aaKnown RBP16.53■□□□□ 0.24
SPIN3-243ENST00000640717 ACEP12821 1306 aa16.52■□□□□ 0.24
SPIN3-243ENST00000640717 NKTRP30414 1462 aaKnown RBP16.52■□□□□ 0.24
SPIN3-243ENST00000640717 ZBTB7CA1YPR0 619 aa16.52■□□□□ 0.24
SPIN3-243ENST00000640717 DCTN1Q14203 1278 aa16.52■□□□□ 0.24
SPIN3-243ENST00000640717 RLBP1P12271 317 aa16.51■□□□□ 0.23
SPIN3-243ENST00000640717 PAK3O75914 559 aaPredicted RBP16.51■□□□□ 0.23
SPIN3-243ENST00000640717 NGDNQ8NEJ9 315 aaKnown RBP16.51■□□□□ 0.23
SPIN3-243ENST00000640717 FAM83GA6ND36 823 aa16.51■□□□□ 0.23
SPIN3-243ENST00000640717 KCNA6P17658 529 aa16.51■□□□□ 0.23
SPIN3-243ENST00000640717 TRIM35Q9UPQ4 493 aa16.51■□□□□ 0.23
SPIN3-243ENST00000640717 PLEKHF1Q96S99 279 aa16.5■□□□□ 0.23
SPIN3-243ENST00000640717 RARSP54136 660 aaKnown RBP16.5■□□□□ 0.23
SPIN3-243ENST00000640717 AEBP1Q8IUX7 1158 aa16.5■□□□□ 0.23
SPIN3-243ENST00000640717 INSRP06213 1382 aa16.49■□□□□ 0.23
SPIN3-243ENST00000640717 NSD2O96028 1365 aa16.49■□□□□ 0.23
SPIN3-243ENST00000640717 ERICH6Q7L0X2 663 aa16.48■□□□□ 0.23
SPIN3-243ENST00000640717 ADAMTS13Q76LX8 1427 aa16.48■□□□□ 0.23
SPIN3-243ENST00000640717 REREQ9P2R6 1566 aa16.48■□□□□ 0.23
SPIN3-243ENST00000640717 THEMISQ8N1K5 641 aaPredicted RBP16.48■□□□□ 0.23
SPIN3-243ENST00000640717 NEFMP07197 916 aa16.48■□□□□ 0.23
SPIN3-243ENST00000640717 FANCIQ9NVI1 1328 aa16.47■□□□□ 0.23
SPIN3-243ENST00000640717 HSP90AB2PQ58FF8 381 aa16.47■□□□□ 0.23
SPIN3-243ENST00000640717 SMC4Q9NTJ3 1288 aa16.47■□□□□ 0.23
SPIN3-243ENST00000640717 IGHDP01880 384 aa16.47■□□□□ 0.23
SPIN3-243ENST00000640717 LTV1Q96GA3 475 aaPredicted RBP16.47■□□□□ 0.23
SPIN3-243ENST00000640717 NINLQ9Y2I6 1382 aa16.47■□□□□ 0.23
SPIN3-243ENST00000640717 PTPRUQ92729 1446 aa16.47■□□□□ 0.23
SPIN3-243ENST00000640717 NLRP1Q9C000 1473 aa16.46■□□□□ 0.23
SPIN3-243ENST00000640717 XPCQ01831 940 aaPredicted RBP16.46■□□□□ 0.23
SPIN3-243ENST00000640717 MYH16Q9H6N6 1097 aa16.45■□□□□ 0.22
SPIN3-243ENST00000640717 SHPRHQ149N8 1683 aa16.45■□□□□ 0.22
SPIN3-243ENST00000640717 NRXN3Q9Y4C0 1643 aa16.45■□□□□ 0.22
SPIN3-243ENST00000640717 CPS1P31327 1500 aa16.45■□□□□ 0.22
SPIN3-243ENST00000640717 PDE4AP27815 886 aa16.44■□□□□ 0.22
SPIN3-243ENST00000640717 SULT6B1Q6IMI4 303 aa16.44■□□□□ 0.22
SPIN3-243ENST00000640717 WDR63Q8IWG1 891 aa16.44■□□□□ 0.22
SPIN3-243ENST00000640717 RSPH6AQ9H0K4 717 aa16.44■□□□□ 0.22
SPIN3-243ENST00000640717 TTC21BQ7Z4L5 1316 aa16.43■□□□□ 0.22
SPIN3-243ENST00000640717 LMOD2Q6P5Q4 547 aa16.43■□□□□ 0.22
SPIN3-243ENST00000640717 FTSJ3Q8IY81 847 aaKnown RBP16.43■□□□□ 0.22
SPIN3-243ENST00000640717 SSH1Q8WYL5 1049 aa16.43■□□□□ 0.22
SPIN3-243ENST00000640717 PHF23Q9BUL5 403 aaPredicted RBP16.42■□□□□ 0.22
SPIN3-243ENST00000640717 IL13P35225 146 aa16.41■□□□□ 0.22
SPIN3-243ENST00000640717 TSPYL6Q8N831 410 aa16.41■□□□□ 0.22
SPIN3-243ENST00000640717 NLRP6P59044 892 aa16.4■□□□□ 0.22
SPIN3-243ENST00000640717 MIS18AQ9NYP9 233 aa16.4■□□□□ 0.22
SPIN3-243ENST00000640717 KRT24Q2M2I5 525 aa16.4■□□□□ 0.22
SPIN3-243ENST00000640717 PLEKHG1Q9ULL1 1385 aa16.4■□□□□ 0.22
SPIN3-243ENST00000640717 FCHSD2O94868 740 aa16.4■□□□□ 0.22
SPIN3-243ENST00000640717 ITPRIPQ8IWB1 547 aa16.4■□□□□ 0.22
SPIN3-243ENST00000640717 EIF4A2Q14240 407 aaKnown RBP16.39■□□□□ 0.21
SPIN3-243ENST00000640717 MCM10Q7L590 875 aa16.39■□□□□ 0.21
SPIN3-243ENST00000640717 NOB1Q9ULX3 412 aaKnown RBP16.39■□□□□ 0.21
SPIN3-243ENST00000640717 PCDHB15Q9Y5E8 787 aa16.39■□□□□ 0.21
SPIN3-243ENST00000640717 IQSEC2Q5JU85 1478 aa16.39■□□□□ 0.21
SPIN3-243ENST00000640717 CPSF1Q10570 1443 aaKnown RBP16.39■□□□□ 0.21
SPIN3-243ENST00000640717 EDC4Q6P2E9 1401 aaKnown RBP16.39■□□□□ 0.21
SPIN3-243ENST00000640717 FOXO3O43524 673 aa16.38■□□□□ 0.21
SPIN3-243ENST00000640717 ZNF692Q9BU19 519 aaPredicted RBP16.38■□□□□ 0.21
SPIN3-243ENST00000640717 ANP32AP39687 249 aaKnown RBP16.38■□□□□ 0.21
SPIN3-243ENST00000640717 UBR1Q8IWV7 1749 aa16.38■□□□□ 0.21
SPIN3-243ENST00000640717 ATP7BP35670 1465 aa16.37■□□□□ 0.21
SPIN3-243ENST00000640717 AMPHP49418 695 aa16.37■□□□□ 0.21
SPIN3-243ENST00000640717 TBX22Q9Y458 520 aa16.37■□□□□ 0.21
SPIN3-243ENST00000640717 COL3A1P02461 1466 aaPredicted RBP16.37■□□□□ 0.21
SPIN3-243ENST00000640717 CCDC27Q2M243 656 aa16.37■□□□□ 0.21
SPIN3-243ENST00000640717 CENPQQ7L2Z9 268 aaPredicted RBP16.37■□□□□ 0.21
SPIN3-243ENST00000640717 ANP32EQ9BTT0 268 aa16.37■□□□□ 0.21
SPIN3-243ENST00000640717 KDM2BQ8NHM5 1336 aa16.37■□□□□ 0.21
SPIN3-243ENST00000640717 NGEFQ8N5V2 710 aa16.36■□□□□ 0.21
SPIN3-243ENST00000640717 SETD1AO15047 1707 aaKnown RBP16.36■□□□□ 0.21
SPIN3-243ENST00000640717 TRIM27P14373 513 aa16.36■□□□□ 0.21
SPIN3-243ENST00000640717 NBR1Q14596 966 aa16.36■□□□□ 0.21
SPIN3-243ENST00000640717 NFE2L2Q16236 605 aa16.36■□□□□ 0.21
SPIN3-243ENST00000640717 USHBP1Q8N6Y0 703 aa16.36■□□□□ 0.21
SPIN3-243ENST00000640717 ABTB2Q8N961 1025 aa16.36■□□□□ 0.21
SPIN3-243ENST00000640717 SLC4A3P48751 1232 aa16.35■□□□□ 0.21
SPIN3-243ENST00000640717 DLC1Q96QB1 1528 aa16.35■□□□□ 0.21
SPIN3-243ENST00000640717 ESCO1Q5FWF5 840 aa16.35■□□□□ 0.21
SPIN3-243ENST00000640717 ZKSCAN2Q63HK3 967 aa16.35■□□□□ 0.21
SPIN3-243ENST00000640717 ANKLE2Q86XL3 938 aa16.35■□□□□ 0.21
SPIN3-243ENST00000640717 FAM135BQ49AJ0 1406 aa16.35■□□□□ 0.21
SPIN3-243ENST00000640717 PNPLA6Q8IY17 1366 aa16.34■□□□□ 0.21
SPIN3-243ENST00000640717 DZIP1LQ8IYY4 767 aaKnown RBP16.34■□□□□ 0.21
SPIN3-243ENST00000640717 MAP3K19Q56UN5 1328 aa16.34■□□□□ 0.21
SPIN3-243ENST00000640717 PDE3AQ14432 1141 aa16.34■□□□□ 0.21
SPIN3-243ENST00000640717 BACH2Q9BYV9 841 aa16.34■□□□□ 0.21
SPIN3-243ENST00000640717 C1orf115Q9H7X2 142 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms