RNA–Protein interactions for RNA: ENST00000640187.1

SPIN3-237, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-237ENST00000640187 KNDC1Q76NI1 1749 aa17.08■□□□□ 0.32
SPIN3-237ENST00000640187 PPM1GO15355 546 aaPredicted RBP17.07■□□□□ 0.32
SPIN3-237ENST00000640187 CPSF1Q10570 1443 aaKnown RBP17.07■□□□□ 0.32
SPIN3-237ENST00000640187 ATP7BP35670 1465 aa17.07■□□□□ 0.32
SPIN3-237ENST00000640187 ARHGAP23Q9P227 1491 aa17.07■□□□□ 0.32
SPIN3-237ENST00000640187 C20orf194Q5TEA3 1177 aa17.06■□□□□ 0.32
SPIN3-237ENST00000640187 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.06■□□□□ 0.32
SPIN3-237ENST00000640187 SLIT1O75093 1534 aa17.06■□□□□ 0.32
SPIN3-237ENST00000640187 TBX22Q9Y458 520 aa17.05■□□□□ 0.32
SPIN3-237ENST00000640187 POLKQ9UBT6 870 aa17.04■□□□□ 0.32
SPIN3-237ENST00000640187 ANKRD26Q9UPS8 1709 aa17.04■□□□□ 0.32
SPIN3-237ENST00000640187 E9PSI1 815 aa17.04■□□□□ 0.32
SPIN3-237ENST00000640187 KIF20BQ96Q89 1820 aa17.03■□□□□ 0.32
SPIN3-237ENST00000640187 COL3A1P02461 1466 aaPredicted RBP17.02■□□□□ 0.32
SPIN3-237ENST00000640187 CRBNQ96SW2 442 aa17.02■□□□□ 0.32
SPIN3-237ENST00000640187 NGEFQ8N5V2 710 aa17.02■□□□□ 0.31
SPIN3-237ENST00000640187 EMILIN1Q9Y6C2 1016 aa17.02■□□□□ 0.31
SPIN3-237ENST00000640187 EDC4Q6P2E9 1401 aaKnown RBP17.01■□□□□ 0.31
SPIN3-237ENST00000640187 IQSEC2Q5JU85 1478 aa17.01■□□□□ 0.31
SPIN3-237ENST00000640187 RIMS1Q86UR5 1692 aaKnown RBP17.01■□□□□ 0.31
SPIN3-237ENST00000640187 DIAPH1O60610 1272 aaKnown RBP17.01■□□□□ 0.31
SPIN3-237ENST00000640187 BCAR3O75815 825 aa17.01■□□□□ 0.31
SPIN3-237ENST00000640187 PLEKHF1Q96S99 279 aa17.01■□□□□ 0.31
SPIN3-237ENST00000640187 DNAJC5Q9H3Z4 198 aa17.01■□□□□ 0.31
SPIN3-237ENST00000640187 PHF23Q9BUL5 403 aaPredicted RBP17.01■□□□□ 0.31
SPIN3-237ENST00000640187 ACEP12821 1306 aa17■□□□□ 0.31
SPIN3-237ENST00000640187 PNPLA6Q8IY17 1366 aa17■□□□□ 0.31
SPIN3-237ENST00000640187 NKTRP30414 1462 aaKnown RBP16.99■□□□□ 0.31
SPIN3-237ENST00000640187 CDC42BPGQ6DT37 1551 aa16.99■□□□□ 0.31
SPIN3-237ENST00000640187 KCNA6P17658 529 aa16.99■□□□□ 0.31
SPIN3-237ENST00000640187 RRS1Q15050 365 aaKnown RBP16.99■□□□□ 0.31
SPIN3-237ENST00000640187 PMFBP1Q8TBY8 1022 aa16.99■□□□□ 0.31
SPIN3-237ENST00000640187 MAP2P11137 1827 aaKnown RBP16.98■□□□□ 0.31
SPIN3-237ENST00000640187 ZNF692Q9BU19 519 aaPredicted RBP16.98■□□□□ 0.31
SPIN3-237ENST00000640187 PRKCSHP14314 528 aaPredicted RBP16.98■□□□□ 0.31
SPIN3-237ENST00000640187 COG3Q96JB2 828 aa16.98■□□□□ 0.31
SPIN3-237ENST00000640187 NOP58Q9Y2X3 529 aaKnown RBP16.97■□□□□ 0.31
SPIN3-237ENST00000640187 CEP170BQ9Y4F5 1589 aaPredicted RBP16.96■□□□□ 0.31
SPIN3-237ENST00000640187 TMPOP42166 694 aaKnown RBP16.96■□□□□ 0.31
SPIN3-237ENST00000640187 RBM33Q96EV2 1170 aaKnown RBP16.96■□□□□ 0.31
SPIN3-237ENST00000640187 WDR63Q8IWG1 891 aa16.96■□□□□ 0.3
SPIN3-237ENST00000640187 PLEKHG3A1L390 1219 aa16.95■□□□□ 0.3
SPIN3-237ENST00000640187 CCDC27Q2M243 656 aa16.95■□□□□ 0.3
SPIN3-237ENST00000640187 TTC21BQ7Z4L5 1316 aa16.95■□□□□ 0.3
SPIN3-237ENST00000640187 HMOX1P09601 288 aa16.95■□□□□ 0.3
SPIN3-237ENST00000640187 MON2Q7Z3U7 1717 aa16.94■□□□□ 0.3
SPIN3-237ENST00000640187 TRIM35Q9UPQ4 493 aa16.94■□□□□ 0.3
SPIN3-237ENST00000640187 ADGRB2O60241 1585 aa16.94■□□□□ 0.3
SPIN3-237ENST00000640187 AKAP12Q02952 1782 aa16.94■□□□□ 0.3
SPIN3-237ENST00000640187 MAPK8IP3Q9UPT6 1336 aa16.93■□□□□ 0.3
SPIN3-237ENST00000640187 NBR1Q14596 966 aa16.93■□□□□ 0.3
SPIN3-237ENST00000640187 ANKLE2Q86XL3 938 aa16.93■□□□□ 0.3
SPIN3-237ENST00000640187 ITSN1Q15811 1721 aa16.92■□□□□ 0.3
SPIN3-237ENST00000640187 SOX12O15370 315 aa16.92■□□□□ 0.3
SPIN3-237ENST00000640187 PRKAR2BP31323 418 aa16.92■□□□□ 0.3
SPIN3-237ENST00000640187 RIPK4P57078 832 aa16.92■□□□□ 0.3
SPIN3-237ENST00000640187 PTCH1Q13635 1447 aa16.92■□□□□ 0.3
SPIN3-237ENST00000640187 IL13P35225 146 aa16.91■□□□□ 0.3
SPIN3-237ENST00000640187 TSR2Q969E8 191 aaKnown RBP16.91■□□□□ 0.3
SPIN3-237ENST00000640187 PHACTR3Q96KR7 559 aa16.91■□□□□ 0.3
SPIN3-237ENST00000640187 RSPH6AQ9H0K4 717 aa16.91■□□□□ 0.3
SPIN3-237ENST00000640187 FCHSD2O94868 740 aa16.91■□□□□ 0.3
SPIN3-237ENST00000640187 RGPD8O14715 1765 aaPredicted RBP16.9■□□□□ 0.3
SPIN3-237ENST00000640187 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.9■□□□□ 0.3
SPIN3-237ENST00000640187 ADAMTSL3P82987 1691 aa16.9■□□□□ 0.3
SPIN3-237ENST00000640187 USP6P35125 1406 aa16.9■□□□□ 0.3
SPIN3-237ENST00000640187 PAK3O75914 559 aaPredicted RBP16.9■□□□□ 0.3
SPIN3-237ENST00000640187 BCL2L13Q9BXK5 485 aa16.9■□□□□ 0.3
SPIN3-237ENST00000640187 AATKQ6ZMQ8 1374 aa16.89■□□□□ 0.29
SPIN3-237ENST00000640187 NGDNQ8NEJ9 315 aaKnown RBP16.89■□□□□ 0.29
SPIN3-237ENST00000640187 TOPAZ1Q8N9V7 1692 aa16.89■□□□□ 0.29
SPIN3-237ENST00000640187 DIP2AQ14689 1571 aa16.88■□□□□ 0.29
SPIN3-237ENST00000640187 RARSP54136 660 aaKnown RBP16.88■□□□□ 0.29
SPIN3-237ENST00000640187 NCBP3Q53F19 620 aaKnown RBP16.88■□□□□ 0.29
SPIN3-237ENST00000640187 SKAP1Q86WV1 359 aa16.88■□□□□ 0.29
SPIN3-237ENST00000640187 FRAT1Q92837 279 aaPredicted RBP16.88■□□□□ 0.29
SPIN3-237ENST00000640187 XRN1Q8IZH2 1706 aaKnown RBP16.87■□□□□ 0.29
SPIN3-237ENST00000640187 LRRC7Q96NW7 1537 aa16.87■□□□□ 0.29
SPIN3-237ENST00000640187 MYH16Q9H6N6 1097 aa16.87■□□□□ 0.29
SPIN3-237ENST00000640187 SETD1BQ9UPS6 1966 aaKnown RBP16.86■□□□□ 0.29
SPIN3-237ENST00000640187 TNNQ9UQP3 1299 aa16.86■□□□□ 0.29
SPIN3-237ENST00000640187 PNNQ9H307 717 aaKnown RBP16.86■□□□□ 0.29
SPIN3-237ENST00000640187 SSH2Q76I76 1423 aa16.85■□□□□ 0.29
SPIN3-237ENST00000640187 NRKQ7Z2Y5 1582 aa16.85■□□□□ 0.29
SPIN3-237ENST00000640187 CDK12Q9NYV4 1490 aaPredicted RBP16.85■□□□□ 0.29
SPIN3-237ENST00000640187 EXOSC9Q06265 439 aaKnown RBP16.85■□□□□ 0.29
SPIN3-237ENST00000640187 PANK1Q8TE04 598 aa16.85■□□□□ 0.29
SPIN3-237ENST00000640187 HSP90AB2PQ58FF8 381 aa16.84■□□□□ 0.29
SPIN3-237ENST00000640187 THUMPD2Q9BTF0 503 aaKnown RBP16.84■□□□□ 0.29
SPIN3-237ENST00000640187 OVOS2A0A0J9YW53 1432 aa16.84■□□□□ 0.29
SPIN3-237ENST00000640187 OVOS2Q6IE36 1432 aa16.84■□□□□ 0.29
SPIN3-237ENST00000640187 PIK3R4Q99570 1358 aa16.84■□□□□ 0.29
SPIN3-237ENST00000640187 NUTM2GQ5VZR2 741 aa16.84■□□□□ 0.29
SPIN3-237ENST00000640187 CANXP27824 592 aaKnown RBP16.83■□□□□ 0.28
SPIN3-237ENST00000640187 EIF4A2Q14240 407 aaKnown RBP16.83■□□□□ 0.28
SPIN3-237ENST00000640187 AEBP1Q8IUX7 1158 aa16.83■□□□□ 0.28
SPIN3-237ENST00000640187 COG6Q9Y2V7 657 aa16.82■□□□□ 0.28
SPIN3-237ENST00000640187 NEFMP07197 916 aa16.81■□□□□ 0.28
SPIN3-237ENST00000640187 NFE2L2Q16236 605 aa16.81■□□□□ 0.28
SPIN3-237ENST00000640187 LAS1LQ9Y4W2 734 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms