RNA–Protein interactions for RNA: ENST00000640141.1

KCNMA1-278, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-278ENST00000640141 HDGFL1Q5TGJ6 251 aa22.02■■□□□ 1.12
KCNMA1-278ENST00000640141 SETQ01105 290 aaPredicted RBP22.02■■□□□ 1.12
KCNMA1-278ENST00000640141 SULT6B1Q6IMI4 303 aa22.01■■□□□ 1.11
KCNMA1-278ENST00000640141 KLHL34Q8N239 644 aa22.01■■□□□ 1.11
KCNMA1-278ENST00000640141 PDZRN3Q9UPQ7 1066 aa22.01■■□□□ 1.11
KCNMA1-278ENST00000640141 SLC3A2P08195 630 aaKnown RBP22.01■■□□□ 1.11
KCNMA1-278ENST00000640141 CT47B1P0C2W7 299 aaPredicted RBP22.01■■□□□ 1.11
KCNMA1-278ENST00000640141 CCT4P50991 539 aaKnown RBP22■■□□□ 1.11
KCNMA1-278ENST00000640141 CABP1Q9NZU7 370 aa22■■□□□ 1.11
KCNMA1-278ENST00000640141 SLC4A2P04920 1241 aa22■■□□□ 1.11
KCNMA1-278ENST00000640141 NEK4P51957 841 aa22■■□□□ 1.11
KCNMA1-278ENST00000640141 FAM177BA6PVY3 158 aa22■■□□□ 1.11
KCNMA1-278ENST00000640141 RABEP1Q15276 862 aa22■■□□□ 1.11
KCNMA1-278ENST00000640141 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.99■■□□□ 1.11
KCNMA1-278ENST00000640141 IFT57Q9NWB7 429 aa21.99■■□□□ 1.11
KCNMA1-278ENST00000640141 CCDC158Q5M9N0 1113 aa21.99■■□□□ 1.11
KCNMA1-278ENST00000640141 NOB1Q9ULX3 412 aaKnown RBP21.99■■□□□ 1.11
KCNMA1-278ENST00000640141 STRN4Q9NRL3 753 aa21.98■■□□□ 1.11
KCNMA1-278ENST00000640141 MBD3O95983 291 aa21.98■■□□□ 1.11
KCNMA1-278ENST00000640141 NAP1L1P55209 391 aaKnown RBP21.98■■□□□ 1.11
KCNMA1-278ENST00000640141 ARAP1Q96P48 1450 aa21.98■■□□□ 1.11
KCNMA1-278ENST00000640141 LETM1O95202 739 aaPredicted RBP21.98■■□□□ 1.11
KCNMA1-278ENST00000640141 IKQ13123 557 aaPredicted RBP21.98■■□□□ 1.11
KCNMA1-278ENST00000640141 CT47A1Q5JQC4 288 aaPredicted RBP21.97■■□□□ 1.11
KCNMA1-278ENST00000640141 WDR63Q8IWG1 891 aa21.97■■□□□ 1.11
KCNMA1-278ENST00000640141 GNL3LQ9NVN8 582 aaKnown RBP21.97■■□□□ 1.11
KCNMA1-278ENST00000640141 NFKBIBQ15653 356 aa21.97■■□□□ 1.11
KCNMA1-278ENST00000640141 CNNM1Q9NRU3 951 aa21.97■■□□□ 1.11
KCNMA1-278ENST00000640141 R3HCC1Q9Y3T6 440 aaKnown RBP21.97■■□□□ 1.11
KCNMA1-278ENST00000640141 EFCAB5A4FU69 1503 aa21.97■■□□□ 1.11
KCNMA1-278ENST00000640141 OFD1O75665 1012 aa21.97■■□□□ 1.11
KCNMA1-278ENST00000640141 MNS1Q8NEH6 495 aa21.97■■□□□ 1.11
KCNMA1-278ENST00000640141 EHBP1L1Q8N3D4 1523 aa21.96■■□□□ 1.11
KCNMA1-278ENST00000640141 MTMR7Q9Y216 660 aa21.96■■□□□ 1.11
KCNMA1-278ENST00000640141 TSR2Q969E8 191 aaKnown RBP21.96■■□□□ 1.11
KCNMA1-278ENST00000640141 RPGRIP1LQ68CZ1 1315 aa21.96■■□□□ 1.11
KCNMA1-278ENST00000640141 CABP4P57796 275 aa21.96■■□□□ 1.11
KCNMA1-278ENST00000640141 ZNF530Q6P9A1 599 aaPredicted RBP21.96■■□□□ 1.11
KCNMA1-278ENST00000640141 EPS15P42566 896 aa21.96■■□□□ 1.11
KCNMA1-278ENST00000640141 MRE11P49959 708 aa21.96■■□□□ 1.11
KCNMA1-278ENST00000640141 SRCIN1Q9C0H9 1055 aa21.96■■□□□ 1.11
KCNMA1-278ENST00000640141 TEX35Q5T0J7 233 aa21.95■■□□□ 1.11
KCNMA1-278ENST00000640141 TROQ12816 1431 aaPredicted RBP21.95■■□□□ 1.1
KCNMA1-278ENST00000640141 FAM43AQ8N2R8 423 aa21.95■■□□□ 1.1
KCNMA1-278ENST00000640141 SPG7Q9UQ90 795 aa21.95■■□□□ 1.1
KCNMA1-278ENST00000640141 TTC39AQ5SRH9 613 aa21.95■■□□□ 1.1
KCNMA1-278ENST00000640141 C1orf115Q9H7X2 142 aa21.95■■□□□ 1.1
KCNMA1-278ENST00000640141 KINO60870 393 aaKnown RBP21.95■■□□□ 1.1
KCNMA1-278ENST00000640141 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.95■■□□□ 1.1
KCNMA1-278ENST00000640141 ARGLU1Q9NWB6 273 aaPredicted RBP21.95■■□□□ 1.1
KCNMA1-278ENST00000640141 RTEL1-TNFRSF6BF6WH68 1400 aa21.94■■□□□ 1.1
KCNMA1-278ENST00000640141 IFT140Q96RY7 1462 aa21.93■■□□□ 1.1
KCNMA1-278ENST00000640141 MRC2Q9UBG0 1479 aa21.93■■□□□ 1.1
KCNMA1-278ENST00000640141 CDR1P51861 262 aa21.93■■□□□ 1.1
KCNMA1-278ENST00000640141 NASPP49321 788 aaPredicted RBP21.93■■□□□ 1.1
KCNMA1-278ENST00000640141 ODF2Q5BJF6 829 aa21.93■■□□□ 1.1
KCNMA1-278ENST00000640141 TOM1L2Q6ZVM7 507 aa21.93■■□□□ 1.1
KCNMA1-278ENST00000640141 ZNF396Q96N95 335 aaPredicted RBP21.93■■□□□ 1.1
KCNMA1-278ENST00000640141 LRRCC1Q9C099 1032 aa21.93■■□□□ 1.1
KCNMA1-278ENST00000640141 CCDC39Q9UFE4 941 aa21.92■■□□□ 1.1
KCNMA1-278ENST00000640141 CNKSR2Q8WXI2 1034 aa21.92■■□□□ 1.1
KCNMA1-278ENST00000640141 ACBD3Q9H3P7 528 aa21.92■■□□□ 1.1
KCNMA1-278ENST00000640141 RUFY1Q96T51 708 aa21.92■■□□□ 1.1
KCNMA1-278ENST00000640141 NBPF8Q3BBV2 869 aa21.92■■□□□ 1.1
KCNMA1-278ENST00000640141 TXLNAP40222 546 aa21.91■■□□□ 1.1
KCNMA1-278ENST00000640141 ATP2B1P20020 1258 aa21.91■■□□□ 1.1
KCNMA1-278ENST00000640141 ATAD2Q6PL18 1390 aa21.91■■□□□ 1.1
KCNMA1-278ENST00000640141 RRP12Q5JTH9 1297 aaKnown RBP21.91■■□□□ 1.1
KCNMA1-278ENST00000640141 PDILTQ8N807 584 aa21.91■■□□□ 1.1
KCNMA1-278ENST00000640141 ANKRD30BQ9BXX2 1392 aa21.91■■□□□ 1.1
KCNMA1-278ENST00000640141 ATF7IPQ6VMQ6 1270 aa21.9■■□□□ 1.1
KCNMA1-278ENST00000640141 BCAR3O75815 825 aa21.9■■□□□ 1.1
KCNMA1-278ENST00000640141 ZNF771Q7L3S4 317 aaPredicted RBP21.9■■□□□ 1.1
KCNMA1-278ENST00000640141 ANKLE2Q86XL3 938 aa21.9■■□□□ 1.1
KCNMA1-278ENST00000640141 NACAP1Q9BZK3 213 aa21.9■■□□□ 1.1
KCNMA1-278ENST00000640141 TRAK2O60296 914 aa21.89■■□□□ 1.1
KCNMA1-278ENST00000640141 ERBINQ96RT1 1412 aa21.89■■□□□ 1.1
KCNMA1-278ENST00000640141 CYP46A1Q9Y6A2 500 aa21.89■■□□□ 1.1
KCNMA1-278ENST00000640141 ANKRD1Q15327 319 aa21.89■■□□□ 1.09
KCNMA1-278ENST00000640141 AK7Q96M32 723 aa21.89■■□□□ 1.09
KCNMA1-278ENST00000640141 RNF214Q8ND24 703 aa21.89■■□□□ 1.09
KCNMA1-278ENST00000640141 CDK5RAP3Q96JB5 506 aa21.89■■□□□ 1.09
KCNMA1-278ENST00000640141 KDM4AO75164 1064 aa21.88■■□□□ 1.09
KCNMA1-278ENST00000640141 CCDC173Q0VFZ6 552 aa21.88■■□□□ 1.09
KCNMA1-278ENST00000640141 STK38Q15208 465 aa21.88■■□□□ 1.09
KCNMA1-278ENST00000640141 FAM13BQ9NYF5 915 aa21.88■■□□□ 1.09
KCNMA1-278ENST00000640141 JMYQ8N9B5 988 aa21.88■■□□□ 1.09
KCNMA1-278ENST00000640141 DDX54Q8TDD1 881 aaKnown RBP21.88■■□□□ 1.09
KCNMA1-278ENST00000640141 TRIM5Q9C035 493 aa21.88■■□□□ 1.09
KCNMA1-278ENST00000640141 FILIP1LQ4L180 1135 aa21.87■■□□□ 1.09
KCNMA1-278ENST00000640141 CAVIN1Q6NZI2 390 aaKnown RBP21.87■■□□□ 1.09
KCNMA1-278ENST00000640141 PIP4K2AP48426 406 aaPredicted RBP21.86■■□□□ 1.09
KCNMA1-278ENST00000640141 ZNF428Q96B54 188 aa21.86■■□□□ 1.09
KCNMA1-278ENST00000640141 MVPQ14764 893 aaKnown RBP21.86■■□□□ 1.09
KCNMA1-278ENST00000640141 PHF23Q9BUL5 403 aaPredicted RBP21.86■■□□□ 1.09
KCNMA1-278ENST00000640141 ZSCAN25Q6NSZ9 544 aa21.86■■□□□ 1.09
KCNMA1-278ENST00000640141 CCDC57Q2TAC2 916 aa21.85■■□□□ 1.09
KCNMA1-278ENST00000640141 PRPF40AO75400 957 aaKnown RBP21.85■■□□□ 1.09
KCNMA1-278ENST00000640141 FCHSD2O94868 740 aa21.85■■□□□ 1.09
KCNMA1-278ENST00000640141 AEBP1Q8IUX7 1158 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms