RNA–Protein interactions for RNA: ENST00000640119.1

HNRNPU-225, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-225ENST00000640119 SRPK2P78362 688 aaKnown RBP16.7■□□□□ 0.26
HNRNPU-225ENST00000640119 CABLES1Q8TDN4 633 aa16.7■□□□□ 0.26
HNRNPU-225ENST00000640119 ATRNO75882 1429 aa16.7■□□□□ 0.26
HNRNPU-225ENST00000640119 PIK3C2AO00443 1686 aa16.69■□□□□ 0.26
HNRNPU-225ENST00000640119 EVC2Q86UK5 1308 aa16.69■□□□□ 0.26
HNRNPU-225ENST00000640119 FNBP4Q8N3X1 1017 aaPredicted RBP16.68■□□□□ 0.26
HNRNPU-225ENST00000640119 NGLY1Q96IV0 654 aa16.68■□□□□ 0.26
HNRNPU-225ENST00000640119 CDK12Q9NYV4 1490 aaPredicted RBP16.67■□□□□ 0.26
HNRNPU-225ENST00000640119 COL14A1Q05707 1796 aaKnown RBP16.67■□□□□ 0.26
HNRNPU-225ENST00000640119 PLEKHG5O94827 1062 aa16.67■□□□□ 0.26
HNRNPU-225ENST00000640119 LMOD2Q6P5Q4 547 aa16.67■□□□□ 0.26
HNRNPU-225ENST00000640119 RGS12O14924 1447 aa16.67■□□□□ 0.26
HNRNPU-225ENST00000640119 USP6P35125 1406 aa16.67■□□□□ 0.26
HNRNPU-225ENST00000640119 GLI3P10071 1580 aa16.66■□□□□ 0.26
HNRNPU-225ENST00000640119 SSH2Q76I76 1423 aa16.66■□□□□ 0.26
HNRNPU-225ENST00000640119 TESK2Q96S53 571 aa16.64■□□□□ 0.25
HNRNPU-225ENST00000640119 CABP1Q9NZU7 370 aa16.64■□□□□ 0.25
HNRNPU-225ENST00000640119 USP21Q9UK80 565 aa16.64■□□□□ 0.25
HNRNPU-225ENST00000640119 CD163L1Q9NR16 1453 aa16.64■□□□□ 0.25
HNRNPU-225ENST00000640119 ATAD2Q6PL18 1390 aa16.64■□□□□ 0.25
HNRNPU-225ENST00000640119 USP47Q96K76 1375 aa16.64■□□□□ 0.25
HNRNPU-225ENST00000640119 PAK3O75914 559 aaPredicted RBP16.63■□□□□ 0.25
HNRNPU-225ENST00000640119 CPSF1Q10570 1443 aaKnown RBP16.62■□□□□ 0.25
HNRNPU-225ENST00000640119 RXRBP28702 533 aa16.62■□□□□ 0.25
HNRNPU-225ENST00000640119 QTRT2Q9H974 415 aaKnown RBP16.62■□□□□ 0.25
HNRNPU-225ENST00000640119 USP54Q70EL1 1684 aa16.62■□□□□ 0.25
HNRNPU-225ENST00000640119 SLIT3O75094 1523 aa16.61■□□□□ 0.25
HNRNPU-225ENST00000640119 CCER1Q8TC90 406 aaPredicted RBP16.61■□□□□ 0.25
HNRNPU-225ENST00000640119 TIMELESSQ9UNS1 1208 aa16.61■□□□□ 0.25
HNRNPU-225ENST00000640119 LMO7Q8WWI1 1683 aa16.61■□□□□ 0.25
HNRNPU-225ENST00000640119 USP19O94966 1318 aa16.61■□□□□ 0.25
HNRNPU-225ENST00000640119 ST20-MTHFSA0A0A6YYL1 179 aa16.6■□□□□ 0.25
HNRNPU-225ENST00000640119 HAP1P54257 671 aaPredicted RBP16.6■□□□□ 0.25
HNRNPU-225ENST00000640119 RBM6P78332 1123 aaKnown RBP16.6■□□□□ 0.25
HNRNPU-225ENST00000640119 NUTM2GQ5VZR2 741 aa16.6■□□□□ 0.25
HNRNPU-225ENST00000640119 TRPC5Q9UL62 973 aaPredicted RBP16.6■□□□□ 0.25
HNRNPU-225ENST00000640119 BRD4O60885 1362 aaPredicted RBP16.6■□□□□ 0.25
HNRNPU-225ENST00000640119 BRWD3Q6RI45 1802 aa16.59■□□□□ 0.25
HNRNPU-225ENST00000640119 MYOM1P52179 1685 aa16.59■□□□□ 0.25
HNRNPU-225ENST00000640119 FAM83GA6ND36 823 aa16.58■□□□□ 0.24
HNRNPU-225ENST00000640119 UNC5CLQ8IV45 518 aa16.58■□□□□ 0.24
HNRNPU-225ENST00000640119 KIAA0232Q92628 1395 aa16.57■□□□□ 0.24
HNRNPU-225ENST00000640119 COL18A1P39060 1754 aa16.56■□□□□ 0.24
HNRNPU-225ENST00000640119 ABTB2Q8N961 1025 aa16.55■□□□□ 0.24
HNRNPU-225ENST00000640119 NFAT5O94916 1531 aa16.55■□□□□ 0.24
HNRNPU-225ENST00000640119 TTC21BQ7Z4L5 1316 aa16.54■□□□□ 0.24
HNRNPU-225ENST00000640119 RGPD5Q99666 1765 aa16.54■□□□□ 0.24
HNRNPU-225ENST00000640119 A0A1W2PP64 1363 aa16.53■□□□□ 0.24
HNRNPU-225ENST00000640119 CPDO75976 1380 aa16.53■□□□□ 0.24
HNRNPU-225ENST00000640119 KTN1Q86UP2 1357 aaKnown RBP16.53■□□□□ 0.24
HNRNPU-225ENST00000640119 CAMTA1Q9Y6Y1 1673 aa16.53■□□□□ 0.24
HNRNPU-225ENST00000640119 GJD4Q96KN9 370 aaPredicted RBP16.53■□□□□ 0.24
HNRNPU-225ENST00000640119 CHRNA2Q15822 529 aa16.52■□□□□ 0.24
HNRNPU-225ENST00000640119 VPS72Q15906 364 aa16.52■□□□□ 0.24
HNRNPU-225ENST00000640119 PUS7Q96PZ0 661 aaKnown RBP16.52■□□□□ 0.24
HNRNPU-225ENST00000640119 SLC12A5Q9H2X9 1139 aa16.52■□□□□ 0.24
HNRNPU-225ENST00000640119 PRDM11Q9NQV5 511 aa16.52■□□□□ 0.24
HNRNPU-225ENST00000640119 THSD7AQ9UPZ6 1657 aa16.52■□□□□ 0.23
HNRNPU-225ENST00000640119 ZC3H6P61129 1189 aaKnown RBP16.51■□□□□ 0.23
HNRNPU-225ENST00000640119 ZNF692Q9BU19 519 aaPredicted RBP16.51■□□□□ 0.23
HNRNPU-225ENST00000640119 BTG4Q9NY30 223 aa16.51■□□□□ 0.23
HNRNPU-225ENST00000640119 TTC21AQ8NDW8 1320 aa16.5■□□□□ 0.23
HNRNPU-225ENST00000640119 NLRP13Q86W25 1043 aa16.5■□□□□ 0.23
HNRNPU-225ENST00000640119 LTN1O94822 1766 aa16.5■□□□□ 0.23
HNRNPU-225ENST00000640119 EDC4Q6P2E9 1401 aaKnown RBP16.5■□□□□ 0.23
HNRNPU-225ENST00000640119 NINLQ9Y2I6 1382 aa16.5■□□□□ 0.23
HNRNPU-225ENST00000640119 EP400Q96L91 3159 aa16.49■□□□□ 0.23
HNRNPU-225ENST00000640119 GCP02774 474 aa16.49■□□□□ 0.23
HNRNPU-225ENST00000640119 NLRP6P59044 892 aa16.49■□□□□ 0.23
HNRNPU-225ENST00000640119 TMC1Q8TDI8 760 aa16.49■□□□□ 0.23
HNRNPU-225ENST00000640119 WNK3Q9BYP7 1800 aa16.48■□□□□ 0.23
HNRNPU-225ENST00000640119 ZRANB1Q9UGI0 708 aa16.48■□□□□ 0.23
HNRNPU-225ENST00000640119 USP31Q70CQ4 1352 aa16.48■□□□□ 0.23
HNRNPU-225ENST00000640119 COL5A2P05997 1499 aaPredicted RBP16.48■□□□□ 0.23
HNRNPU-225ENST00000640119 KIF20BQ96Q89 1820 aa16.47■□□□□ 0.23
HNRNPU-225ENST00000640119 OVOS2A0A0J9YW53 1432 aa16.47■□□□□ 0.23
HNRNPU-225ENST00000640119 OVOS2Q6IE36 1432 aa16.47■□□□□ 0.23
HNRNPU-225ENST00000640119 TMF1P82094 1093 aa16.46■□□□□ 0.23
HNRNPU-225ENST00000640119 NME9Q86XW9 330 aa16.46■□□□□ 0.23
HNRNPU-225ENST00000640119 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.46■□□□□ 0.23
HNRNPU-225ENST00000640119 UPF1Q92900 1129 aaKnown RBP eCLIP16.46■□□□□ 0.23
HNRNPU-225ENST00000640119 ANKRD36BQ8N2N9 1353 aa16.46■□□□□ 0.23
HNRNPU-225ENST00000640119 SPATA31A5Q5VU36 1347 aa16.45■□□□□ 0.22
HNRNPU-225ENST00000640119 SPATA31A7Q8IWB4 1347 aa16.45■□□□□ 0.22
HNRNPU-225ENST00000640119 HDGFL2Q7Z4V5 671 aaPredicted RBP16.45■□□□□ 0.22
HNRNPU-225ENST00000640119 CCDC9Q9Y3X0 531 aaKnown RBP16.44■□□□□ 0.22
HNRNPU-225ENST00000640119 ABCC6O95255 1503 aa16.44■□□□□ 0.22
HNRNPU-225ENST00000640119 AATKQ6ZMQ8 1374 aa16.43■□□□□ 0.22
HNRNPU-225ENST00000640119 ONECUT3O60422 494 aaPredicted RBP16.43■□□□□ 0.22
HNRNPU-225ENST00000640119 SLC24A1O60721 1099 aa16.43■□□□□ 0.22
HNRNPU-225ENST00000640119 TERF2IPQ9NYB0 399 aa16.43■□□□□ 0.22
HNRNPU-225ENST00000640119 SEPT12Q8IYM1 358 aa16.42■□□□□ 0.22
HNRNPU-225ENST00000640119 STRN4Q9NRL3 753 aa16.42■□□□□ 0.22
HNRNPU-225ENST00000640119 SPATA31A1Q5TZJ5 1347 aa16.42■□□□□ 0.22
HNRNPU-225ENST00000640119 PARP4Q9UKK3 1724 aaKnown RBP16.42■□□□□ 0.22
HNRNPU-225ENST00000640119 HSPA5P11021 654 aaKnown RBP16.41■□□□□ 0.22
HNRNPU-225ENST00000640119 FAM98CQ17RN3 349 aaKnown RBP16.41■□□□□ 0.22
HNRNPU-225ENST00000640119 ARHGEF25Q86VW2 580 aa16.41■□□□□ 0.22
HNRNPU-225ENST00000640119 SOX12O15370 315 aa16.4■□□□□ 0.22
HNRNPU-225ENST00000640119 LARP1Q6PKG0 1096 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms