RNA–Protein interactions for RNA: ENST00000640119.1

HNRNPU-225, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-225ENST00000640119 SF3B4Q15427 424 aaKnown RBP eCLIP10.54□□□□□ -0.721e-18■■■■■ 82.3
HNRNPU-225ENST00000640119 U2AF2P26368 475 aaKnown RBP eCLIP13.15□□□□□ -0.34e-15■■■■■ 64.4
HNRNPU-225ENST00000640119 EFTUD2Q15029 972 aaKnown RBP eCLIP11.21□□□□□ -0.614e-7■■■■■ 40.4
HNRNPU-225ENST00000640119 RBM22Q9NW64 420 aaKnown RBP eCLIP11.77□□□□□ -0.536e-8■■■■□ 26.7
HNRNPU-225ENST00000640119 AQRO60306 1485 aaKnown RBP eCLIP20.8■□□□□ 0.922e-12■■■■□ 25.6
HNRNPU-225ENST00000640119 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.91■□□□□ 0.142e-35■■■■□ 21.9
HNRNPU-225ENST00000640119 TRA2AQ13595 282 aaKnown RBP eCLIP11.46□□□□□ -0.577e-15■■■□□ 17.4
HNRNPU-225ENST00000640119 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.06□□□□□ -0.86e-8■■■□□ 17.1
HNRNPU-225ENST00000640119 LARP4Q71RC2 724 aaKnown RBP eCLIP10.69□□□□□ -0.73e-25■■■□□ 16.6
HNRNPU-225ENST00000640119 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.97□□□□□ -0.497e-29■■■□□ 15.4
HNRNPU-225ENST00000640119 G3BP1Q13283 466 aaKnown RBP eCLIP14.49□□□□□ -0.092e-12■■■□□ 15.2
HNRNPU-225ENST00000640119 AGGF1Q8N302 714 aaeCLIP11.45□□□□□ -0.581e-10■■■□□ 14.6
HNRNPU-225ENST00000640119 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.42□□□□□ -0.582e-7■■□□□ 14.4
HNRNPU-225ENST00000640119 SRSF1Q07955 248 aaKnown RBP eCLIP10.98□□□□□ -0.654e-7■■□□□ 13.8
HNRNPU-225ENST00000640119 WDR43Q15061 677 aaKnown RBP eCLIP15.49■□□□□ 0.072e-6■■□□□ 13.5
HNRNPU-225ENST00000640119 EIF3HO15372 352 aaKnown RBP eCLIP11.23□□□□□ -0.612e-9■■□□□ 13
HNRNPU-225ENST00000640119 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.97■□□□□ 0.473e-14■■□□□ 12.9
HNRNPU-225ENST00000640119 KHSRPQ92945 711 aaKnown RBP eCLIP12.82□□□□□ -0.363e-10■■□□□ 12.7
HNRNPU-225ENST00000640119 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.22□□□□□ -0.291e-10■■□□□ 12.3
HNRNPU-225ENST00000640119 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.75□□□□□ -0.697e-16■■□□□ 11.9
HNRNPU-225ENST00000640119 ZNF622Q969S3 477 aaKnown RBP eCLIP15.18■□□□□ 0.027e-21■□□□□ 11.3
HNRNPU-225ENST00000640119 FXR1P51114 621 aaKnown RBP eCLIP13.49□□□□□ -0.258e-9■□□□□ 10
HNRNPU-225ENST00000640119 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.13□□□□□ -0.472e-14■□□□□ 9.9
HNRNPU-225ENST00000640119 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.16□□□□□ -0.143e-12■□□□□ 9.8
HNRNPU-225ENST00000640119 PUM1Q14671 1186 aaKnown RBP eCLIP11.99□□□□□ -0.493e-20■□□□□ 9.6
HNRNPU-225ENST00000640119 FXR2P51116 673 aaKnown RBP eCLIP13.08□□□□□ -0.322e-14■□□□□ 9.5
HNRNPU-225ENST00000640119 FTOQ9C0B1 505 aaKnown RBP eCLIP13.26□□□□□ -0.293e-6■□□□□ 9.2
HNRNPU-225ENST00000640119 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.8□□□□□ -0.682e-6■□□□□ 8.9
HNRNPU-225ENST00000640119 RBM15Q96T37 977 aaKnown RBP eCLIP11.72□□□□□ -0.534e-13■□□□□ 8.8
HNRNPU-225ENST00000640119 FMR1Q06787 632 aaKnown RBP eCLIP14.71□□□□□ -0.052e-11■□□□□ 8.4
HNRNPU-225ENST00000640119 CDC40O60508 579 aaKnown RBP eCLIP10.75□□□□□ -0.692e-9■□□□□ 8.3
Retrieved 31 of 31 RNA–protein pairs in 25.1 ms