RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 MEX3CQ5U5Q3 659 aaKnown RBP20.64■□□□□ 0.89
CDC42BPB-209ENST00000634889 MARF1Q9Y4F3 1742 aaKnown RBP20.64■□□□□ 0.89
CDC42BPB-209ENST00000634889 NRKQ7Z2Y5 1582 aa20.63■□□□□ 0.89
CDC42BPB-209ENST00000634889 HSPA5P11021 654 aaKnown RBP20.63■□□□□ 0.89
CDC42BPB-209ENST00000634889 PHF23Q9BUL5 403 aaPredicted RBP20.63■□□□□ 0.89
CDC42BPB-209ENST00000634889 LMOD2Q6P5Q4 547 aa20.62■□□□□ 0.89
CDC42BPB-209ENST00000634889 CD163L1Q9NR16 1453 aa20.62■□□□□ 0.89
CDC42BPB-209ENST00000634889 SSH2Q76I76 1423 aa20.61■□□□□ 0.89
CDC42BPB-209ENST00000634889 CRYBG1Q9Y4K1 1723 aa20.61■□□□□ 0.89
CDC42BPB-209ENST00000634889 TMC1Q8TDI8 760 aa20.6■□□□□ 0.89
CDC42BPB-209ENST00000634889 KTN1Q86UP2 1357 aaKnown RBP20.59■□□□□ 0.89
CDC42BPB-209ENST00000634889 SLC12A5Q9H2X9 1139 aa20.59■□□□□ 0.89
CDC42BPB-209ENST00000634889 TERF2IPQ9NYB0 399 aa20.59■□□□□ 0.89
CDC42BPB-209ENST00000634889 HDGFL2Q7Z4V5 671 aaPredicted RBP20.58■□□□□ 0.89
CDC42BPB-209ENST00000634889 PHRF1Q9P1Y6 1649 aaKnown RBP20.57■□□□□ 0.88
CDC42BPB-209ENST00000634889 ADAMTS2O95450 1211 aa20.57■□□□□ 0.88
CDC42BPB-209ENST00000634889 ABTB2Q8N961 1025 aa20.57■□□□□ 0.88
CDC42BPB-209ENST00000634889 PIK3C2AO00443 1686 aa20.57■□□□□ 0.88
CDC42BPB-209ENST00000634889 MYOM1P52179 1685 aa20.57■□□□□ 0.88
CDC42BPB-209ENST00000634889 A0A1W2PP64 1363 aa20.57■□□□□ 0.88
CDC42BPB-209ENST00000634889 TTC21AQ8NDW8 1320 aa20.56■□□□□ 0.88
CDC42BPB-209ENST00000634889 HAP1P54257 671 aaPredicted RBP20.56■□□□□ 0.88
CDC42BPB-209ENST00000634889 EDC4Q6P2E9 1401 aaKnown RBP20.55■□□□□ 0.88
CDC42BPB-209ENST00000634889 CABLES1Q8TDN4 633 aa20.55■□□□□ 0.88
CDC42BPB-209ENST00000634889 ANKRD36BQ8N2N9 1353 aa20.55■□□□□ 0.88
CDC42BPB-209ENST00000634889 C8orf37Q96NL8 207 aa20.54■□□□□ 0.88
CDC42BPB-209ENST00000634889 RGS17Q9UGC6 210 aaPredicted RBP20.54■□□□□ 0.88
CDC42BPB-209ENST00000634889 USP19O94966 1318 aa20.53■□□□□ 0.88
CDC42BPB-209ENST00000634889 TTC21BQ7Z4L5 1316 aa20.53■□□□□ 0.88
CDC42BPB-209ENST00000634889 NLRP13Q86W25 1043 aa20.53■□□□□ 0.88
CDC42BPB-209ENST00000634889 USP54Q70EL1 1684 aa20.52■□□□□ 0.88
CDC42BPB-209ENST00000634889 ZNF772Q68DY9 489 aaPredicted RBP20.52■□□□□ 0.88
CDC42BPB-209ENST00000634889 NGLY1Q96IV0 654 aa20.52■□□□□ 0.88
CDC42BPB-209ENST00000634889 AFF2P51816 1311 aa20.52■□□□□ 0.87
CDC42BPB-209ENST00000634889 SLIT3O75094 1523 aa20.5■□□□□ 0.87
CDC42BPB-209ENST00000634889 PLEKHG5O94827 1062 aa20.5■□□□□ 0.87
CDC42BPB-209ENST00000634889 NUTM2GQ5VZR2 741 aa20.5■□□□□ 0.87
CDC42BPB-209ENST00000634889 FNBP4Q8N3X1 1017 aaPredicted RBP20.5■□□□□ 0.87
CDC42BPB-209ENST00000634889 PLCH1Q4KWH8 1693 aa20.49■□□□□ 0.87
CDC42BPB-209ENST00000634889 NLRP6P59044 892 aa20.49■□□□□ 0.87
CDC42BPB-209ENST00000634889 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.49■□□□□ 0.87
CDC42BPB-209ENST00000634889 NWD2Q9ULI1 1742 aa20.49■□□□□ 0.87
CDC42BPB-209ENST00000634889 COL14A1Q05707 1796 aaKnown RBP20.49■□□□□ 0.87
CDC42BPB-209ENST00000634889 SLIT2O94813 1529 aa20.48■□□□□ 0.87
CDC42BPB-209ENST00000634889 USP31Q70CQ4 1352 aa20.47■□□□□ 0.87
CDC42BPB-209ENST00000634889 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.46■□□□□ 0.87
CDC42BPB-209ENST00000634889 CPDO75976 1380 aa20.46■□□□□ 0.87
CDC42BPB-209ENST00000634889 BCL9LQ86UU0 1499 aa20.45■□□□□ 0.86
CDC42BPB-209ENST00000634889 USP21Q9UK80 565 aa20.45■□□□□ 0.86
CDC42BPB-209ENST00000634889 GCP02774 474 aa20.44■□□□□ 0.86
CDC42BPB-209ENST00000634889 POTEAQ6S8J7 498 aa20.44■□□□□ 0.86
CDC42BPB-209ENST00000634889 KIAA0232Q92628 1395 aa20.44■□□□□ 0.86
CDC42BPB-209ENST00000634889 FAM83GA6ND36 823 aa20.43■□□□□ 0.86
CDC42BPB-209ENST00000634889 C11orf95C9JLR9 678 aaPredicted RBP20.43■□□□□ 0.86
CDC42BPB-209ENST00000634889 ZEB1P37275 1124 aaPredicted RBP20.43■□□□□ 0.86
CDC42BPB-209ENST00000634889 NME9Q86XW9 330 aa20.43■□□□□ 0.86
CDC42BPB-209ENST00000634889 KCNH5Q8NCM2 988 aa20.43■□□□□ 0.86
CDC42BPB-209ENST00000634889 POLR3GLQ9BT43 218 aa20.43■□□□□ 0.86
CDC42BPB-209ENST00000634889 OVOS2A0A0J9YW53 1432 aa20.43■□□□□ 0.86
CDC42BPB-209ENST00000634889 OVOS2Q6IE36 1432 aa20.43■□□□□ 0.86
CDC42BPB-209ENST00000634889 PRDM11Q9NQV5 511 aa20.42■□□□□ 0.86
CDC42BPB-209ENST00000634889 KIF7Q2M1P5 1343 aa20.42■□□□□ 0.86
CDC42BPB-209ENST00000634889 NRAPQ86VF7 1730 aa20.41■□□□□ 0.86
CDC42BPB-209ENST00000634889 KIF20BQ96Q89 1820 aa20.41■□□□□ 0.86
CDC42BPB-209ENST00000634889 TRPC5Q9UL62 973 aaPredicted RBP20.41■□□□□ 0.86
CDC42BPB-209ENST00000634889 ATRNO75882 1429 aa20.41■□□□□ 0.86
CDC42BPB-209ENST00000634889 NFAT5O94916 1531 aa20.41■□□□□ 0.86
CDC42BPB-209ENST00000634889 ZC3H6P61129 1189 aaKnown RBP20.4■□□□□ 0.86
CDC42BPB-209ENST00000634889 UNC5CLQ8IV45 518 aa20.4■□□□□ 0.86
CDC42BPB-209ENST00000634889 LMO7Q8WWI1 1683 aa20.4■□□□□ 0.86
CDC42BPB-209ENST00000634889 NSD3Q9BZ95 1437 aa20.39■□□□□ 0.85
CDC42BPB-209ENST00000634889 QTRT2Q9H974 415 aaKnown RBP20.39■□□□□ 0.85
CDC42BPB-209ENST00000634889 ILDR2Q71H61 639 aa20.38■□□□□ 0.85
CDC42BPB-209ENST00000634889 CARD14Q9BXL6 1004 aa20.38■□□□□ 0.85
CDC42BPB-209ENST00000634889 ZRANB1Q9UGI0 708 aa20.38■□□□□ 0.85
CDC42BPB-209ENST00000634889 ABCC6O95255 1503 aa20.37■□□□□ 0.85
CDC42BPB-209ENST00000634889 BTG4Q9NY30 223 aa20.37■□□□□ 0.85
CDC42BPB-209ENST00000634889 CDK12Q9NYV4 1490 aaPredicted RBP20.37■□□□□ 0.85
CDC42BPB-209ENST00000634889 RXRBP28702 533 aa20.36■□□□□ 0.85
CDC42BPB-209ENST00000634889 COG3Q96JB2 828 aa20.36■□□□□ 0.85
CDC42BPB-209ENST00000634889 AATKQ6ZMQ8 1374 aa20.35■□□□□ 0.85
CDC42BPB-209ENST00000634889 CCDC7Q96M83 1385 aa20.35■□□□□ 0.85
CDC42BPB-209ENST00000634889 FYB1O15117 783 aa20.35■□□□□ 0.85
CDC42BPB-209ENST00000634889 RBM6P78332 1123 aaKnown RBP20.35■□□□□ 0.85
CDC42BPB-209ENST00000634889 CHRNA2Q15822 529 aa20.35■□□□□ 0.85
CDC42BPB-209ENST00000634889 COL18A1P39060 1754 aa20.34■□□□□ 0.85
CDC42BPB-209ENST00000634889 ARHGEF25Q86VW2 580 aa20.34■□□□□ 0.85
CDC42BPB-209ENST00000634889 PANK3Q9H999 370 aa20.34■□□□□ 0.85
CDC42BPB-209ENST00000634889 CAMTA1Q9Y6Y1 1673 aa20.34■□□□□ 0.85
CDC42BPB-209ENST00000634889 LTN1O94822 1766 aa20.34■□□□□ 0.85
CDC42BPB-209ENST00000634889 CGNL1Q0VF96 1302 aa20.33■□□□□ 0.85
CDC42BPB-209ENST00000634889 WASHC2AQ641Q2 1341 aa20.33■□□□□ 0.85
CDC42BPB-209ENST00000634889 VPS72Q15906 364 aa20.33■□□□□ 0.85
CDC42BPB-209ENST00000634889 GJD4Q96KN9 370 aaPredicted RBP20.32■□□□□ 0.84
CDC42BPB-209ENST00000634889 GLI3P10071 1580 aa20.32■□□□□ 0.84
CDC42BPB-209ENST00000634889 ANKRD26Q9UPS8 1709 aa20.32■□□□□ 0.84
CDC42BPB-209ENST00000634889 SOX12O15370 315 aa20.31■□□□□ 0.84
CDC42BPB-209ENST00000634889 GGNBP2Q9H3C7 697 aa20.31■□□□□ 0.84
CDC42BPB-209ENST00000634889 COL5A2P05997 1499 aaPredicted RBP20.3■□□□□ 0.84
CDC42BPB-209ENST00000634889 NSD2O96028 1365 aa20.29■□□□□ 0.84
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