RNA–Protein interactions for RNA: ENST00000633552.1

GPCPD1-207, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-207ENST00000633552 PRKD2Q9BZL6 878 aa8.59□□□□□ -1.03
GPCPD1-207ENST00000633552 MAP10Q9P2G4 905 aa8.59□□□□□ -1.03
GPCPD1-207ENST00000633552 DXOO77932 396 aaKnown RBP8.58□□□□□ -1.04
GPCPD1-207ENST00000633552 NKX2-3Q8TAU0 364 aa8.58□□□□□ -1.04
GPCPD1-207ENST00000633552 ZNF777Q9ULD5 760 aaPredicted RBP8.58□□□□□ -1.04
GPCPD1-207ENST00000633552 S1PR4O95977 384 aa8.57□□□□□ -1.04
GPCPD1-207ENST00000633552 V9GY48 417 aaPredicted RBP8.57□□□□□ -1.04
GPCPD1-207ENST00000633552 MMP16P51512 607 aa8.56□□□□□ -1.04
GPCPD1-207ENST00000633552 F12P00748 615 aaPredicted RBP8.54□□□□□ -1.04
GPCPD1-207ENST00000633552 FCF1Q9Y324 198 aaKnown RBP8.54□□□□□ -1.04
GPCPD1-207ENST00000633552 GGCXP38435 758 aa8.53□□□□□ -1.04
GPCPD1-207ENST00000633552 VAC14Q08AM6 782 aa8.53□□□□□ -1.04
GPCPD1-207ENST00000633552 KCNH2Q12809 1159 aa8.53□□□□□ -1.04
GPCPD1-207ENST00000633552 WASHC4Q2M389 1173 aa8.53□□□□□ -1.04
GPCPD1-207ENST00000633552 FNBP4Q8N3X1 1017 aaPredicted RBP8.53□□□□□ -1.04
GPCPD1-207ENST00000633552 FKBPLQ9UIM3 349 aa8.53□□□□□ -1.04
GPCPD1-207ENST00000633552 PPP1R18Q6NYC8 613 aa8.52□□□□□ -1.05
GPCPD1-207ENST00000633552 ARMC2Q8NEN0 867 aa8.52□□□□□ -1.05
GPCPD1-207ENST00000633552 CCDC97Q96F63 343 aaPredicted RBP8.52□□□□□ -1.05
GPCPD1-207ENST00000633552 EVA1BQ9NVM1 165 aa8.52□□□□□ -1.05
GPCPD1-207ENST00000633552 POM121CA8CG34 1229 aa8.51□□□□□ -1.05
GPCPD1-207ENST00000633552 IRF5Q13568 498 aa8.51□□□□□ -1.05
GPCPD1-207ENST00000633552 NBPF14Q5TI25 921 aa8.51□□□□□ -1.05
GPCPD1-207ENST00000633552 ZNF787Q6DD87 383 aa8.51□□□□□ -1.05
GPCPD1-207ENST00000633552 UNC93B1Q9H1C4 597 aa8.51□□□□□ -1.05
GPCPD1-207ENST00000633552 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.51□□□□□ -1.05
GPCPD1-207ENST00000633552 CALR3Q96L12 384 aaKnown RBP8.5□□□□□ -1.05
GPCPD1-207ENST00000633552 C1orf115Q9H7X2 142 aa8.5□□□□□ -1.05
GPCPD1-207ENST00000633552 PPEF1O14829 653 aaPredicted RBP8.49□□□□□ -1.05
GPCPD1-207ENST00000633552 ZBTB24O43167 697 aaPredicted RBP8.49□□□□□ -1.05
GPCPD1-207ENST00000633552 AGERQ15109 404 aa8.49□□□□□ -1.05
GPCPD1-207ENST00000633552 CCDC82Q8N4S0 544 aa8.49□□□□□ -1.05
GPCPD1-207ENST00000633552 GLMNQ92990 594 aa8.49□□□□□ -1.05
GPCPD1-207ENST00000633552 PDZRN3Q9UPQ7 1066 aa8.49□□□□□ -1.05
GPCPD1-207ENST00000633552 GPR37L1O60883 481 aa8.48□□□□□ -1.05
GPCPD1-207ENST00000633552 LINC01559Q495D7 138 aa8.48□□□□□ -1.05
GPCPD1-207ENST00000633552 ZC3H4Q9UPT8 1303 aaKnown RBP8.48□□□□□ -1.05
GPCPD1-207ENST00000633552 ZBBXA8MT70 800 aa8.47□□□□□ -1.05
GPCPD1-207ENST00000633552 EIF4G2P78344 907 aaKnown RBP eCLIP8.47□□□□□ -1.05
GPCPD1-207ENST00000633552 PTCRAQ6ISU1 281 aaPredicted RBP8.47□□□□□ -1.05
GPCPD1-207ENST00000633552 RNF223E7ERA6 249 aa8.46□□□□□ -1.06
GPCPD1-207ENST00000633552 PTK2Q05397 1052 aa8.46□□□□□ -1.06
GPCPD1-207ENST00000633552 NR1H3Q13133 447 aa8.46□□□□□ -1.06
GPCPD1-207ENST00000633552 SEMA3FQ13275 785 aa8.46□□□□□ -1.06
GPCPD1-207ENST00000633552 ARHGAP9Q9BRR9 750 aa8.46□□□□□ -1.06
GPCPD1-207ENST00000633552 CARD14Q9BXL6 1004 aa8.46□□□□□ -1.06
GPCPD1-207ENST00000633552 MAGEB6P1A0A0J9YX57 407 aa8.45□□□□□ -1.06
GPCPD1-207ENST00000633552 FBXO45P0C2W1 286 aa8.45□□□□□ -1.06
GPCPD1-207ENST00000633552 HDGFL1Q5TGJ6 251 aa8.45□□□□□ -1.06
GPCPD1-207ENST00000633552 GPKOWQ92917 476 aaPredicted RBP eCLIP8.45□□□□□ -1.064e-7■■■■□ 21.3
GPCPD1-207ENST00000633552 ZBTB33Q86T24 672 aa8.44□□□□□ -1.06
GPCPD1-207ENST00000633552 BAP1Q92560 729 aa8.44□□□□□ -1.06
GPCPD1-207ENST00000633552 SERPINA10Q9UK55 444 aa8.44□□□□□ -1.06
GPCPD1-207ENST00000633552 PDXDC2PQ6P474 469 aa8.43□□□□□ -1.06
GPCPD1-207ENST00000633552 ANKLE1Q8NAG6 615 aa8.43□□□□□ -1.06
GPCPD1-207ENST00000633552 PCDHB9Q9Y5E1 797 aa8.43□□□□□ -1.06
GPCPD1-207ENST00000633552 SOX11P35716 441 aa8.42□□□□□ -1.06
GPCPD1-207ENST00000633552 ZNF511Q8NB15 262 aa8.41□□□□□ -1.06
GPCPD1-207ENST00000633552 TRIM32Q13049 653 aa8.4□□□□□ -1.06
GPCPD1-207ENST00000633552 BPHLQ86WA6 291 aaPredicted RBP8.4□□□□□ -1.06
GPCPD1-207ENST00000633552 ADAM32Q8TC27 787 aa8.4□□□□□ -1.06
GPCPD1-207ENST00000633552 ZNF592Q92610 1267 aa8.4□□□□□ -1.06
GPCPD1-207ENST00000633552 GPSM3Q9Y4H4 160 aa8.4□□□□□ -1.06
GPCPD1-207ENST00000633552 PLA2G2CQ5R387 149 aa8.39□□□□□ -1.07
GPCPD1-207ENST00000633552 DZIP3Q86Y13 1208 aaKnown RBP8.39□□□□□ -1.07
GPCPD1-207ENST00000633552 ADAMTS19Q8TE59 1207 aa8.39□□□□□ -1.07
GPCPD1-207ENST00000633552 FOXJ1Q92949 421 aa8.39□□□□□ -1.07
GPCPD1-207ENST00000633552 ZNF775Q96BV0 537 aaPredicted RBP8.39□□□□□ -1.07
GPCPD1-207ENST00000633552 SLC10A4Q96EP9 437 aa8.38□□□□□ -1.07
GPCPD1-207ENST00000633552 SH3BP5LQ7L8J4 393 aa8.37□□□□□ -1.07
GPCPD1-207ENST00000633552 ALG2Q9H553 416 aa8.37□□□□□ -1.07
GPCPD1-207ENST00000633552 CD2BP2O95400 341 aaKnown RBP8.36□□□□□ -1.07
GPCPD1-207ENST00000633552 RFX1P22670 979 aa8.36□□□□□ -1.07
GPCPD1-207ENST00000633552 SH3BP2P78314 561 aa8.36□□□□□ -1.07
GPCPD1-207ENST00000633552 PKDCCQ504Y2 493 aa8.36□□□□□ -1.07
GPCPD1-207ENST00000633552 HOMEZQ8IX15 550 aa8.36□□□□□ -1.07
GPCPD1-207ENST00000633552 SLFNL1Q499Z3 407 aa8.35□□□□□ -1.07
GPCPD1-207ENST00000633552 EHBP1Q8NDI1 1231 aa8.35□□□□□ -1.07
GPCPD1-207ENST00000633552 ARXQ96QS3 562 aa8.35□□□□□ -1.07
GPCPD1-207ENST00000633552 OCSTAMPQ9BR26 566 aa8.35□□□□□ -1.07
GPCPD1-207ENST00000633552 SLC19A1P41440 591 aa8.34□□□□□ -1.07
GPCPD1-207ENST00000633552 RPIAP49247 311 aa8.34□□□□□ -1.07
GPCPD1-207ENST00000633552 ERFEQ4G0M1 354 aa8.34□□□□□ -1.07
GPCPD1-207ENST00000633552 DGAT1O75907 488 aa8.33□□□□□ -1.08
GPCPD1-207ENST00000633552 WNT7BP56706 349 aa8.33□□□□□ -1.08
GPCPD1-207ENST00000633552 RAB15P59190 212 aa8.33□□□□□ -1.08
GPCPD1-207ENST00000633552 SH3RF1Q7Z6J0 888 aa8.33□□□□□ -1.08
GPCPD1-207ENST00000633552 FAM174AQ8TBP5 190 aa8.33□□□□□ -1.08
GPCPD1-207ENST00000633552 PALM3A6NDB9 673 aaPredicted RBP8.32□□□□□ -1.08
GPCPD1-207ENST00000633552 SKIP12755 728 aa8.32□□□□□ -1.08
GPCPD1-207ENST00000633552 LMOD1P29536 600 aaPredicted RBP8.32□□□□□ -1.08
GPCPD1-207ENST00000633552 MCCD1P59942 119 aaPredicted RBP8.32□□□□□ -1.08
GPCPD1-207ENST00000633552 ARID5BQ14865 1188 aa8.32□□□□□ -1.08
GPCPD1-207ENST00000633552 NBPF20Q3BBV1 942 aa8.32□□□□□ -1.08
GPCPD1-207ENST00000633552 C4orf48Q5BLP8 95 aa8.32□□□□□ -1.08
GPCPD1-207ENST00000633552 RNF135Q8IUD6 432 aa8.32□□□□□ -1.08
GPCPD1-207ENST00000633552 PPP1R12CQ9BZL4 782 aa8.32□□□□□ -1.08
GPCPD1-207ENST00000633552 TFIP11Q9UBB9 837 aaKnown RBP8.32□□□□□ -1.08
GPCPD1-207ENST00000633552 PIK3CDO00329 1044 aa8.31□□□□□ -1.08
GPCPD1-207ENST00000633552 VARSP26640 1264 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms