RNA–Protein interactions for RNA: ENST00000629716.2

LINC01515-220, Transcript of long intergenic non-protein coding RNA 1515, humanhuman

TSL 5

Gene LINC01515, Length 559 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01515-220ENST00000629716 TRAK1Q9UPV9 953 aa13.35□□□□□ -0.27
LINC01515-220ENST00000629716 NCKAP5LQ9HCH0 1330 aa13.35□□□□□ -0.27
LINC01515-220ENST00000629716 HSPA2P54652 639 aa13.33□□□□□ -0.28
LINC01515-220ENST00000629716 LRPPRCP42704 1394 aaKnown RBP13.32□□□□□ -0.28
LINC01515-220ENST00000629716 NPHP4O75161 1426 aaPredicted RBP13.31□□□□□ -0.28
LINC01515-220ENST00000629716 ADAMTS13Q76LX8 1427 aa13.31□□□□□ -0.28
LINC01515-220ENST00000629716 YTHDC2Q9H6S0 1430 aaKnown RBP13.31□□□□□ -0.28
LINC01515-220ENST00000629716 POGKQ9P215 609 aa13.31□□□□□ -0.28
LINC01515-220ENST00000629716 ADGRB1O14514 1584 aa13.31□□□□□ -0.28
LINC01515-220ENST00000629716 CENPJQ9HC77 1338 aaPredicted RBP13.31□□□□□ -0.28
LINC01515-220ENST00000629716 METP08581 1390 aa13.31□□□□□ -0.28
LINC01515-220ENST00000629716 ABCC11Q96J66 1382 aa13.3□□□□□ -0.28
LINC01515-220ENST00000629716 LMTK3Q96Q04 1460 aa13.29□□□□□ -0.28
LINC01515-220ENST00000629716 DIP2AQ14689 1571 aa13.29□□□□□ -0.28
LINC01515-220ENST00000629716 TMF1P82094 1093 aa13.29□□□□□ -0.28
LINC01515-220ENST00000629716 BOLA1Q9Y3E2 137 aa13.29□□□□□ -0.28
LINC01515-220ENST00000629716 PIK3R4Q99570 1358 aa13.29□□□□□ -0.28
LINC01515-220ENST00000629716 MED14O60244 1454 aa13.29□□□□□ -0.28
LINC01515-220ENST00000629716 NRXN3Q9Y4C0 1643 aa13.28□□□□□ -0.28
LINC01515-220ENST00000629716 IQGAP1P46940 1657 aa13.28□□□□□ -0.28
LINC01515-220ENST00000629716 CDCA8Q53HL2 280 aa13.28□□□□□ -0.28
LINC01515-220ENST00000629716 MARVELD3Q96A59 401 aa13.28□□□□□ -0.28
LINC01515-220ENST00000629716 SIRT1Q96EB6 747 aa13.28□□□□□ -0.28
LINC01515-220ENST00000629716 PRAM1Q96QH2 718 aa13.27□□□□□ -0.29
LINC01515-220ENST00000629716 AMOTL2Q9Y2J4 779 aa13.27□□□□□ -0.29
LINC01515-220ENST00000629716 ASXL1Q8IXJ9 1541 aa13.27□□□□□ -0.29
LINC01515-220ENST00000629716 EFCAB3Q8N7B9 438 aa13.26□□□□□ -0.29
LINC01515-220ENST00000629716 TESK2Q96S53 571 aa13.26□□□□□ -0.29
LINC01515-220ENST00000629716 POLR3GLQ9BT43 218 aa13.26□□□□□ -0.29
LINC01515-220ENST00000629716 SAFB2Q14151 953 aaKnown RBP eCLIP13.25□□□□□ -0.29
LINC01515-220ENST00000629716 POLR1AO95602 1720 aaPredicted RBP13.25□□□□□ -0.29
LINC01515-220ENST00000629716 DLC1Q96QB1 1528 aa13.24□□□□□ -0.29
LINC01515-220ENST00000629716 CCDC7Q96M83 1385 aa13.24□□□□□ -0.29
LINC01515-220ENST00000629716 SBNO2Q9Y2G9 1366 aa13.24□□□□□ -0.29
LINC01515-220ENST00000629716 G3V3G9 751 aa13.24□□□□□ -0.29
LINC01515-220ENST00000629716 RNF25Q96BH1 459 aaPredicted RBP13.24□□□□□ -0.29
LINC01515-220ENST00000629716 SETD1AO15047 1707 aaKnown RBP13.24□□□□□ -0.29
LINC01515-220ENST00000629716 FAM135BQ49AJ0 1406 aa13.23□□□□□ -0.29
LINC01515-220ENST00000629716 WASHC2AQ641Q2 1341 aa13.23□□□□□ -0.29
LINC01515-220ENST00000629716 EVC2Q86UK5 1308 aa13.23□□□□□ -0.29
LINC01515-220ENST00000629716 C11orf95C9JLR9 678 aaPredicted RBP13.23□□□□□ -0.29
LINC01515-220ENST00000629716 KCNA6P17658 529 aa13.23□□□□□ -0.29
LINC01515-220ENST00000629716 WAPLQ7Z5K2 1190 aa13.23□□□□□ -0.29
LINC01515-220ENST00000629716 TECPR2O15040 1411 aa13.22□□□□□ -0.29
LINC01515-220ENST00000629716 PTPRUQ92729 1446 aa13.22□□□□□ -0.29
LINC01515-220ENST00000629716 KIF7Q2M1P5 1343 aa13.22□□□□□ -0.29
LINC01515-220ENST00000629716 MINK1Q8N4C8 1332 aaPredicted RBP13.22□□□□□ -0.29
LINC01515-220ENST00000629716 RIOK3O14730 519 aaKnown RBP13.22□□□□□ -0.29
LINC01515-220ENST00000629716 DDX10Q13206 875 aaKnown RBP13.22□□□□□ -0.29
LINC01515-220ENST00000629716 DIEXFQ68CQ4 756 aaKnown RBP13.2□□□□□ -0.3
LINC01515-220ENST00000629716 ROBO2Q9HCK4 1378 aa13.2□□□□□ -0.3
LINC01515-220ENST00000629716 DISP3Q9P2K9 1392 aa13.2□□□□□ -0.3
LINC01515-220ENST00000629716 ARHGEF28Q8N1W1 1705 aaKnown RBP13.19□□□□□ -0.3
LINC01515-220ENST00000629716 PUS7Q96PZ0 661 aaKnown RBP13.19□□□□□ -0.3
LINC01515-220ENST00000629716 PTCH1Q13635 1447 aa13.19□□□□□ -0.3
LINC01515-220ENST00000629716 PLEKHH1Q9ULM0 1364 aa13.19□□□□□ -0.3
LINC01515-220ENST00000629716 CPS1P31327 1500 aa13.18□□□□□ -0.3
LINC01515-220ENST00000629716 SRPK2P78362 688 aaKnown RBP13.18□□□□□ -0.3
LINC01515-220ENST00000629716 PROSER2Q86WR7 435 aaPredicted RBP13.18□□□□□ -0.3
LINC01515-220ENST00000629716 KNDC1Q76NI1 1749 aa13.18□□□□□ -0.3
LINC01515-220ENST00000629716 QRICH2Q9H0J4 1663 aa13.18□□□□□ -0.3
LINC01515-220ENST00000629716 EMP3P54852 163 aa13.17□□□□□ -0.3
LINC01515-220ENST00000629716 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.16□□□□□ -0.3
LINC01515-220ENST00000629716 HOXB3P14651 431 aaPredicted RBP13.16□□□□□ -0.3
LINC01515-220ENST00000629716 C14orf37Q86TY3 774 aa13.16□□□□□ -0.3
LINC01515-220ENST00000629716 ZFP91Q96JP5 570 aaPredicted RBP13.16□□□□□ -0.3
LINC01515-220ENST00000629716 CDK19Q9BWU1 502 aa13.16□□□□□ -0.3
LINC01515-220ENST00000629716 WASLO00401 505 aaPredicted RBP13.15□□□□□ -0.3
LINC01515-220ENST00000629716 SOX12O15370 315 aa13.15□□□□□ -0.3
LINC01515-220ENST00000629716 STRCQ7RTU9 1775 aa13.15□□□□□ -0.31
LINC01515-220ENST00000629716 XRN1Q8IZH2 1706 aaKnown RBP13.14□□□□□ -0.31
LINC01515-220ENST00000629716 CHD2O14647 1828 aaKnown RBP13.14□□□□□ -0.31
LINC01515-220ENST00000629716 TMC1Q8TDI8 760 aa13.14□□□□□ -0.31
LINC01515-220ENST00000629716 ATAD2Q6PL18 1390 aa13.13□□□□□ -0.31
LINC01515-220ENST00000629716 POTEB3A0JP26 581 aa13.13□□□□□ -0.31
LINC01515-220ENST00000629716 POTEBQ6S5H4 581 aa13.13□□□□□ -0.31
LINC01515-220ENST00000629716 NKTRP30414 1462 aaKnown RBP13.12□□□□□ -0.31
LINC01515-220ENST00000629716 SPNS2Q8IVW8 549 aa13.12□□□□□ -0.31
LINC01515-220ENST00000629716 NWD1Q149M9 1564 aa13.11□□□□□ -0.31
LINC01515-220ENST00000629716 TULP4Q9NRJ4 1543 aa13.11□□□□□ -0.31
LINC01515-220ENST00000629716 NINLQ9Y2I6 1382 aa13.1□□□□□ -0.31
LINC01515-220ENST00000629716 MICALL2Q8IY33 904 aa13.1□□□□□ -0.31
LINC01515-220ENST00000629716 NUDT16Q96DE0 195 aaKnown RBP13.1□□□□□ -0.31
LINC01515-220ENST00000629716 RBM33Q96EV2 1170 aaKnown RBP13.1□□□□□ -0.31
LINC01515-220ENST00000629716 MS4A4AQ96JQ5 239 aa13.1□□□□□ -0.31
LINC01515-220ENST00000629716 HS3ST6Q96QI5 342 aa13.1□□□□□ -0.31
LINC01515-220ENST00000629716 PANK3Q9H999 370 aa13.1□□□□□ -0.31
LINC01515-220ENST00000629716 ZNF335Q9H4Z2 1342 aaPredicted RBP13.1□□□□□ -0.31
LINC01515-220ENST00000629716 FAM205CA6NFA0 338 aa13.09□□□□□ -0.31
LINC01515-220ENST00000629716 SLC12A5Q9H2X9 1139 aa13.09□□□□□ -0.31
LINC01515-220ENST00000629716 C19orf44Q9H6X5 657 aa13.09□□□□□ -0.31
LINC01515-220ENST00000629716 NCOA3Q9Y6Q9 1424 aa13.09□□□□□ -0.31
LINC01515-220ENST00000629716 ANP32CO43423 234 aa13.08□□□□□ -0.32
LINC01515-220ENST00000629716 TERF2IPQ9NYB0 399 aa13.08□□□□□ -0.32
LINC01515-220ENST00000629716 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.08□□□□□ -0.32
LINC01515-220ENST00000629716 TMEM94Q12767 1356 aa13.07□□□□□ -0.32
LINC01515-220ENST00000629716 ADGRB2O60241 1585 aa13.07□□□□□ -0.32
LINC01515-220ENST00000629716 ADGRL3Q9HAR2 1447 aa13.07□□□□□ -0.32
LINC01515-220ENST00000629716 NUTM2FA1L443 756 aa13.07□□□□□ -0.32
LINC01515-220ENST00000629716 ATF3P18847 181 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms