RNA–Protein interactions for RNA: ENST00000629104.1

CHD2-216, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-216ENST00000629104 EIF4G2P78344 907 aaKnown RBP eCLIP12.44□□□□□ -0.42
CHD2-216ENST00000629104 TMF1P82094 1093 aa12.44□□□□□ -0.42
CHD2-216ENST00000629104 USP6P35125 1406 aa12.44□□□□□ -0.42
CHD2-216ENST00000629104 NRKQ7Z2Y5 1582 aa12.43□□□□□ -0.42
CHD2-216ENST00000629104 PAK3O75914 559 aaPredicted RBP12.43□□□□□ -0.42
CHD2-216ENST00000629104 HSPA5P11021 654 aaKnown RBP12.43□□□□□ -0.42
CHD2-216ENST00000629104 LMOD2Q6P5Q4 547 aa12.43□□□□□ -0.42
CHD2-216ENST00000629104 CPSF1Q10570 1443 aaKnown RBP12.43□□□□□ -0.42
CHD2-216ENST00000629104 BRD4O60885 1362 aaPredicted RBP12.43□□□□□ -0.42
CHD2-216ENST00000629104 CD163L1Q9NR16 1453 aa12.42□□□□□ -0.42
CHD2-216ENST00000629104 MEX3CQ5U5Q3 659 aaKnown RBP12.42□□□□□ -0.42
CHD2-216ENST00000629104 SSH2Q76I76 1423 aa12.42□□□□□ -0.42
CHD2-216ENST00000629104 NINLQ9Y2I6 1382 aa12.42□□□□□ -0.42
CHD2-216ENST00000629104 MYOM1P52179 1685 aa12.42□□□□□ -0.42
CHD2-216ENST00000629104 PHRF1Q9P1Y6 1649 aaKnown RBP12.41□□□□□ -0.42
CHD2-216ENST00000629104 TMC1Q8TDI8 760 aa12.41□□□□□ -0.42
CHD2-216ENST00000629104 ZNF692Q9BU19 519 aaPredicted RBP12.41□□□□□ -0.42
CHD2-216ENST00000629104 PIK3C2AO00443 1686 aa12.41□□□□□ -0.42
CHD2-216ENST00000629104 ADAMTS2O95450 1211 aa12.4□□□□□ -0.42
CHD2-216ENST00000629104 CDCA8Q53HL2 280 aa12.4□□□□□ -0.42
CHD2-216ENST00000629104 SLC12A5Q9H2X9 1139 aa12.4□□□□□ -0.42
CHD2-216ENST00000629104 KTN1Q86UP2 1357 aaKnown RBP12.4□□□□□ -0.42
CHD2-216ENST00000629104 CABLES1Q8TDN4 633 aa12.39□□□□□ -0.43
CHD2-216ENST00000629104 RGS17Q9UGC6 210 aaPredicted RBP12.39□□□□□ -0.43
CHD2-216ENST00000629104 PLEKHG5O94827 1062 aa12.38□□□□□ -0.43
CHD2-216ENST00000629104 HAP1P54257 671 aaPredicted RBP12.38□□□□□ -0.43
CHD2-216ENST00000629104 HDGFL2Q7Z4V5 671 aaPredicted RBP12.38□□□□□ -0.43
CHD2-216ENST00000629104 ABTB2Q8N961 1025 aa12.38□□□□□ -0.43
CHD2-216ENST00000629104 C8orf37Q96NL8 207 aa12.38□□□□□ -0.43
CHD2-216ENST00000629104 A0A1W2PP64 1363 aa12.38□□□□□ -0.43
CHD2-216ENST00000629104 TTC21BQ7Z4L5 1316 aa12.37□□□□□ -0.43
CHD2-216ENST00000629104 NUTM2GQ5VZR2 741 aa12.37□□□□□ -0.43
CHD2-216ENST00000629104 TERF2IPQ9NYB0 399 aa12.37□□□□□ -0.43
CHD2-216ENST00000629104 TTC21AQ8NDW8 1320 aa12.37□□□□□ -0.43
CHD2-216ENST00000629104 PLCH1Q4KWH8 1693 aa12.36□□□□□ -0.43
CHD2-216ENST00000629104 USP54Q70EL1 1684 aa12.36□□□□□ -0.43
CHD2-216ENST00000629104 ANKRD36BQ8N2N9 1353 aa12.36□□□□□ -0.43
CHD2-216ENST00000629104 EDC4Q6P2E9 1401 aaKnown RBP12.36□□□□□ -0.43
CHD2-216ENST00000629104 USP19O94966 1318 aa12.36□□□□□ -0.43
CHD2-216ENST00000629104 AFF2P51816 1311 aa12.36□□□□□ -0.43
CHD2-216ENST00000629104 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.35□□□□□ -0.43
CHD2-216ENST00000629104 NWD2Q9ULI1 1742 aa12.35□□□□□ -0.43
CHD2-216ENST00000629104 NLRP13Q86W25 1043 aa12.35□□□□□ -0.43
CHD2-216ENST00000629104 NGLY1Q96IV0 654 aa12.35□□□□□ -0.43
CHD2-216ENST00000629104 SLIT3O75094 1523 aa12.35□□□□□ -0.43
CHD2-216ENST00000629104 COL14A1Q05707 1796 aaKnown RBP12.35□□□□□ -0.43
CHD2-216ENST00000629104 SLIT2O94813 1529 aa12.34□□□□□ -0.43
CHD2-216ENST00000629104 ZNF772Q68DY9 489 aaPredicted RBP12.34□□□□□ -0.43
CHD2-216ENST00000629104 FNBP4Q8N3X1 1017 aaPredicted RBP12.34□□□□□ -0.43
CHD2-216ENST00000629104 C11orf95C9JLR9 678 aaPredicted RBP12.33□□□□□ -0.44
CHD2-216ENST00000629104 NLRP6P59044 892 aa12.33□□□□□ -0.44
CHD2-216ENST00000629104 POTEAQ6S8J7 498 aa12.33□□□□□ -0.44
CHD2-216ENST00000629104 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.33□□□□□ -0.44
CHD2-216ENST00000629104 KIF20BQ96Q89 1820 aa12.32□□□□□ -0.44
CHD2-216ENST00000629104 NRAPQ86VF7 1730 aa12.32□□□□□ -0.44
CHD2-216ENST00000629104 POLR3GLQ9BT43 218 aa12.32□□□□□ -0.44
CHD2-216ENST00000629104 USP21Q9UK80 565 aa12.32□□□□□ -0.44
CHD2-216ENST00000629104 BCL9LQ86UU0 1499 aa12.32□□□□□ -0.44
CHD2-216ENST00000629104 USP31Q70CQ4 1352 aa12.31□□□□□ -0.44
CHD2-216ENST00000629104 FAM83GA6ND36 823 aa12.31□□□□□ -0.44
CHD2-216ENST00000629104 GCP02774 474 aa12.31□□□□□ -0.44
CHD2-216ENST00000629104 ILDR2Q71H61 639 aa12.31□□□□□ -0.44
CHD2-216ENST00000629104 NME9Q86XW9 330 aa12.31□□□□□ -0.44
CHD2-216ENST00000629104 KIAA0232Q92628 1395 aa12.3□□□□□ -0.44
CHD2-216ENST00000629104 LMO7Q8WWI1 1683 aa12.3□□□□□ -0.44
CHD2-216ENST00000629104 ZRANB1Q9UGI0 708 aa12.3□□□□□ -0.44
CHD2-216ENST00000629104 CPDO75976 1380 aa12.3□□□□□ -0.44
CHD2-216ENST00000629104 OVOS2A0A0J9YW53 1432 aa12.29□□□□□ -0.44
CHD2-216ENST00000629104 ATRNO75882 1429 aa12.29□□□□□ -0.44
CHD2-216ENST00000629104 OVOS2Q6IE36 1432 aa12.29□□□□□ -0.44
CHD2-216ENST00000629104 NFAT5O94916 1531 aa12.29□□□□□ -0.44
CHD2-216ENST00000629104 ZC3H6P61129 1189 aaKnown RBP12.29□□□□□ -0.44
CHD2-216ENST00000629104 PRDM11Q9NQV5 511 aa12.29□□□□□ -0.44
CHD2-216ENST00000629104 KIF7Q2M1P5 1343 aa12.29□□□□□ -0.44
CHD2-216ENST00000629104 NSD3Q9BZ95 1437 aa12.28□□□□□ -0.44
CHD2-216ENST00000629104 UNC5CLQ8IV45 518 aa12.28□□□□□ -0.44
CHD2-216ENST00000629104 KCNH5Q8NCM2 988 aa12.28□□□□□ -0.44
CHD2-216ENST00000629104 CARD14Q9BXL6 1004 aa12.28□□□□□ -0.44
CHD2-216ENST00000629104 QTRT2Q9H974 415 aaKnown RBP12.28□□□□□ -0.44
CHD2-216ENST00000629104 TRPC5Q9UL62 973 aaPredicted RBP12.28□□□□□ -0.44
CHD2-216ENST00000629104 LTN1O94822 1766 aa12.28□□□□□ -0.44
CHD2-216ENST00000629104 COL18A1P39060 1754 aa12.28□□□□□ -0.44
CHD2-216ENST00000629104 CHRNA2Q15822 529 aa12.27□□□□□ -0.45
CHD2-216ENST00000629104 BTG4Q9NY30 223 aa12.27□□□□□ -0.45
CHD2-216ENST00000629104 RGPD5Q99666 1765 aa12.26□□□□□ -0.45
CHD2-216ENST00000629104 RXRBP28702 533 aa12.26□□□□□ -0.45
CHD2-216ENST00000629104 ZEB1P37275 1124 aaPredicted RBP12.26□□□□□ -0.45
CHD2-216ENST00000629104 CCDC7Q96M83 1385 aa12.26□□□□□ -0.45
CHD2-216ENST00000629104 GLI3P10071 1580 aa12.26□□□□□ -0.45
CHD2-216ENST00000629104 CAMTA1Q9Y6Y1 1673 aa12.26□□□□□ -0.45
CHD2-216ENST00000629104 ANKRD26Q9UPS8 1709 aa12.25□□□□□ -0.45
CHD2-216ENST00000629104 FYB1O15117 783 aa12.25□□□□□ -0.45
CHD2-216ENST00000629104 SOX12O15370 315 aa12.25□□□□□ -0.45
CHD2-216ENST00000629104 RBM6P78332 1123 aaKnown RBP12.25□□□□□ -0.45
CHD2-216ENST00000629104 COG3Q96JB2 828 aa12.25□□□□□ -0.45
CHD2-216ENST00000629104 PANK3Q9H999 370 aa12.25□□□□□ -0.45
CHD2-216ENST00000629104 WASHC2AQ641Q2 1341 aa12.25□□□□□ -0.45
CHD2-216ENST00000629104 CDK12Q9NYV4 1490 aaPredicted RBP12.25□□□□□ -0.45
CHD2-216ENST00000629104 ABCC6O95255 1503 aa12.24□□□□□ -0.45
CHD2-216ENST00000629104 VPS72Q15906 364 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms