RNA–Protein interactions for RNA: ENST00000627622.1

CHD2-212, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 2 BASIC

Gene CHD2, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-212ENST00000627622 BAG6P46379 1132 aa12.82□□□□□ -0.36
CHD2-212ENST00000627622 MAPK8IP2Q13387 824 aaPredicted RBP12.82□□□□□ -0.36
CHD2-212ENST00000627622 FAM98CQ17RN3 349 aaKnown RBP12.82□□□□□ -0.36
CHD2-212ENST00000627622 GPRASP1Q5JY77 1395 aa12.82□□□□□ -0.36
CHD2-212ENST00000627622 CRYBG1Q9Y4K1 1723 aa12.82□□□□□ -0.36
CHD2-212ENST00000627622 HIRIP3Q9BW71 556 aaPredicted RBP12.82□□□□□ -0.36
CHD2-212ENST00000627622 TRAK1Q9UPV9 953 aa12.82□□□□□ -0.36
CHD2-212ENST00000627622 EIF3AQ14152 1382 aaKnown RBP12.81□□□□□ -0.36
CHD2-212ENST00000627622 TULP4Q9NRJ4 1543 aa12.8□□□□□ -0.36
CHD2-212ENST00000627622 MINK1Q8N4C8 1332 aaPredicted RBP12.8□□□□□ -0.36
CHD2-212ENST00000627622 PRR36Q9H6K5 1346 aa12.8□□□□□ -0.36
CHD2-212ENST00000627622 ITSN1Q15811 1721 aa12.79□□□□□ -0.36
CHD2-212ENST00000627622 SPATA31A5Q5VU36 1347 aa12.79□□□□□ -0.36
CHD2-212ENST00000627622 SPATA31A7Q8IWB4 1347 aa12.79□□□□□ -0.36
CHD2-212ENST00000627622 PSDA5PKW4 1024 aaPredicted RBP12.79□□□□□ -0.36
CHD2-212ENST00000627622 WASLO00401 505 aaPredicted RBP12.79□□□□□ -0.36
CHD2-212ENST00000627622 THSD7AQ9UPZ6 1657 aa12.78□□□□□ -0.36
CHD2-212ENST00000627622 HRCP23327 699 aa12.78□□□□□ -0.36
CHD2-212ENST00000627622 NGDNQ8NEJ9 315 aaKnown RBP12.78□□□□□ -0.36
CHD2-212ENST00000627622 TNS1Q9HBL0 1735 aaKnown RBP12.77□□□□□ -0.36
CHD2-212ENST00000627622 PAK3O75914 559 aaPredicted RBP12.77□□□□□ -0.36
CHD2-212ENST00000627622 KDM2AQ9Y2K7 1162 aa12.77□□□□□ -0.36
CHD2-212ENST00000627622 ARHGEF28Q8N1W1 1705 aaKnown RBP12.77□□□□□ -0.37
CHD2-212ENST00000627622 EN1Q05925 392 aaPredicted RBP12.76□□□□□ -0.37
CHD2-212ENST00000627622 FAM182BQ5T319 152 aa12.76□□□□□ -0.37
CHD2-212ENST00000627622 DCAF11Q8TEB1 546 aa12.76□□□□□ -0.37
CHD2-212ENST00000627622 RAB3GAP2Q9H2M9 1393 aa12.76□□□□□ -0.37
CHD2-212ENST00000627622 STAC3Q96MF2 364 aa12.76□□□□□ -0.37
CHD2-212ENST00000627622 PRDM11Q9NQV5 511 aa12.76□□□□□ -0.37
CHD2-212ENST00000627622 PHRF1Q9P1Y6 1649 aaKnown RBP12.75□□□□□ -0.37
CHD2-212ENST00000627622 DISP2A7MBM2 1401 aa12.74□□□□□ -0.37
CHD2-212ENST00000627622 ATP7BP35670 1465 aa12.73□□□□□ -0.37
CHD2-212ENST00000627622 SPATA31A1Q5TZJ5 1347 aa12.73□□□□□ -0.37
CHD2-212ENST00000627622 NUDT16Q96DE0 195 aaKnown RBP12.73□□□□□ -0.37
CHD2-212ENST00000627622 KIAA0232Q92628 1395 aa12.73□□□□□ -0.37
CHD2-212ENST00000627622 R3HDM1Q15032 1099 aaKnown RBP12.72□□□□□ -0.37
CHD2-212ENST00000627622 CHRNA2Q15822 529 aa12.71□□□□□ -0.37
CHD2-212ENST00000627622 EZH2Q15910 746 aaKnown RBP12.71□□□□□ -0.37
CHD2-212ENST00000627622 FAM196AQ6ZSG2 479 aa12.71□□□□□ -0.37
CHD2-212ENST00000627622 STRN4Q9NRL3 753 aa12.71□□□□□ -0.37
CHD2-212ENST00000627622 TOPAZ1Q8N9V7 1692 aa12.71□□□□□ -0.37
CHD2-212ENST00000627622 DCAF8L1A6NGE4 600 aa12.7□□□□□ -0.38
CHD2-212ENST00000627622 TRIM37O94972 964 aa12.7□□□□□ -0.38
CHD2-212ENST00000627622 ZC3H6P61129 1189 aaKnown RBP12.7□□□□□ -0.38
CHD2-212ENST00000627622 CAMKK2Q96RR4 588 aa12.7□□□□□ -0.38
CHD2-212ENST00000627622 CDK19Q9BWU1 502 aa12.7□□□□□ -0.38
CHD2-212ENST00000627622 POLR3AO14802 1390 aaPredicted RBP12.69□□□□□ -0.38
CHD2-212ENST00000627622 NUTM2GQ5VZR2 741 aa12.69□□□□□ -0.38
CHD2-212ENST00000627622 EVA1CP58658 441 aa12.68□□□□□ -0.38
CHD2-212ENST00000627622 USP35Q9P2H5 1018 aa12.68□□□□□ -0.38
CHD2-212ENST00000627622 RREB1Q92766 1687 aa12.68□□□□□ -0.38
CHD2-212ENST00000627622 ACEP12821 1306 aa12.68□□□□□ -0.38
CHD2-212ENST00000627622 KIAA1210Q9ULL0 1709 aa12.68□□□□□ -0.38
CHD2-212ENST00000627622 PARD3Q8TEW0 1356 aa12.68□□□□□ -0.38
CHD2-212ENST00000627622 APBA3O96018 575 aa12.68□□□□□ -0.38
CHD2-212ENST00000627622 NBPF8Q3BBV2 869 aa12.68□□□□□ -0.38
CHD2-212ENST00000627622 BARGINQ6ZT62 677 aa12.68□□□□□ -0.38
CHD2-212ENST00000627622 CCDC61Q9Y6R9 512 aa12.68□□□□□ -0.38
CHD2-212ENST00000627622 NRKQ7Z2Y5 1582 aa12.67□□□□□ -0.38
CHD2-212ENST00000627622 SSH2Q76I76 1423 aa12.67□□□□□ -0.38
CHD2-212ENST00000627622 PDE3BQ13370 1112 aa12.67□□□□□ -0.38
CHD2-212ENST00000627622 LMO7Q8WWI1 1683 aa12.66□□□□□ -0.38
CHD2-212ENST00000627622 CAMTA1Q9Y6Y1 1673 aa12.66□□□□□ -0.38
CHD2-212ENST00000627622 NUP188Q5SRE5 1749 aa12.66□□□□□ -0.38
CHD2-212ENST00000627622 PLEKHG3A1L390 1219 aa12.66□□□□□ -0.38
CHD2-212ENST00000627622 ABTB2Q8N961 1025 aa12.66□□□□□ -0.38
CHD2-212ENST00000627622 LARP1Q6PKG0 1096 aaKnown RBP12.65□□□□□ -0.38
CHD2-212ENST00000627622 TCP11L2Q8N4U5 519 aa12.65□□□□□ -0.38
CHD2-212ENST00000627622 CPDO75976 1380 aa12.65□□□□□ -0.39
CHD2-212ENST00000627622 PARP4Q9UKK3 1724 aaKnown RBP12.64□□□□□ -0.39
CHD2-212ENST00000627622 THRAP3Q9Y2W1 955 aaKnown RBP12.63□□□□□ -0.39
CHD2-212ENST00000627622 USP19O94966 1318 aa12.63□□□□□ -0.39
CHD2-212ENST00000627622 SBF2Q86WG5 1849 aa12.63□□□□□ -0.39
CHD2-212ENST00000627622 NBPF14Q5TI25 921 aa12.62□□□□□ -0.39
CHD2-212ENST00000627622 NLRP13Q86W25 1043 aa12.62□□□□□ -0.39
CHD2-212ENST00000627622 PPIP5K1Q6PFW1 1433 aa12.61□□□□□ -0.39
CHD2-212ENST00000627622 GCP02774 474 aa12.61□□□□□ -0.39
CHD2-212ENST00000627622 COL5A2P05997 1499 aaPredicted RBP12.61□□□□□ -0.39
CHD2-212ENST00000627622 C11orf95C9JLR9 678 aaPredicted RBP12.6□□□□□ -0.39
CHD2-212ENST00000627622 SRPK2P78362 688 aaKnown RBP12.6□□□□□ -0.39
CHD2-212ENST00000627622 NBPF1Q3BBV0 1214 aa12.6□□□□□ -0.39
CHD2-212ENST00000627622 BRD4O60885 1362 aaPredicted RBP12.6□□□□□ -0.39
CHD2-212ENST00000627622 RGPD3A6NKT7 1758 aaPredicted RBP12.59□□□□□ -0.39
CHD2-212ENST00000627622 RGPD4Q7Z3J3 1758 aa12.59□□□□□ -0.39
CHD2-212ENST00000627622 PEAK1Q9H792 1746 aa12.59□□□□□ -0.39
CHD2-212ENST00000627622 QRICH2Q9H0J4 1663 aa12.59□□□□□ -0.39
CHD2-212ENST00000627622 CRB1P82279 1406 aa12.59□□□□□ -0.39
CHD2-212ENST00000627622 CENPJQ9HC77 1338 aaPredicted RBP12.58□□□□□ -0.4
CHD2-212ENST00000627622 CABP2Q9NPB3 220 aa12.58□□□□□ -0.4
CHD2-212ENST00000627622 WNK3Q9BYP7 1800 aa12.57□□□□□ -0.4
CHD2-212ENST00000627622 COL18A1P39060 1754 aa12.57□□□□□ -0.4
CHD2-212ENST00000627622 LRRC37A3O60309 1634 aa12.57□□□□□ -0.4
CHD2-212ENST00000627622 RGPD5Q99666 1765 aa12.57□□□□□ -0.4
CHD2-212ENST00000627622 OVOS2A0A0G2JMS6 1433 aa12.57□□□□□ -0.4
CHD2-212ENST00000627622 OVOS2A0A0J9YW53 1432 aa12.57□□□□□ -0.4
CHD2-212ENST00000627622 NLRP6P59044 892 aa12.57□□□□□ -0.4
CHD2-212ENST00000627622 OVOS2Q6IE36 1432 aa12.57□□□□□ -0.4
CHD2-212ENST00000627622 SPON1Q9HCB6 807 aa12.57□□□□□ -0.4
CHD2-212ENST00000627622 SLIT3O75094 1523 aa12.56□□□□□ -0.4
CHD2-212ENST00000627622 AKAP12Q02952 1782 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms